diff options
author | Justin Lecher <jlec@gentoo.org> | 2011-03-26 17:02:47 +0100 |
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committer | Justin Lecher <jlec@gentoo.org> | 2011-03-26 17:02:47 +0100 |
commit | cafbc4b37e3599006df34b1aeac4dcf2ac39d3e8 (patch) | |
tree | 548c149636cb6010d3345e98c05b57d5565da847 /sci-chemistry | |
parent | Install into vendor dir (diff) | |
download | sci-cafbc4b37e3599006df34b1aeac4dcf2ac39d3e8.tar.gz sci-cafbc4b37e3599006df34b1aeac4dcf2ac39d3e8.tar.bz2 sci-cafbc4b37e3599006df34b1aeac4dcf2ac39d3e8.zip |
sci-chemistry/openbabel* moved to tree
Diffstat (limited to 'sci-chemistry')
25 files changed, 0 insertions, 814 deletions
diff --git a/sci-chemistry/openbabel-perl/ChangeLog b/sci-chemistry/openbabel-perl/ChangeLog deleted file mode 100644 index cbbfca8ff..000000000 --- a/sci-chemistry/openbabel-perl/ChangeLog +++ /dev/null @@ -1,51 +0,0 @@ -# ChangeLog for sci-chemistry/openbabel-perl -# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: $ - - 26 Mar 2011; Justin Lecher <jlec@gentoo.org> openbabel-perl-2.3.0.ebuild, - files/openbabel-perl-2.3.0-makefile.patch: - Install into vendor dir - - 25 Mar 2011; Reinis Danne <rei4dan@gmail.com> openbabel-perl-2.3.0.ebuild, - +files/openbabel-perl-2.3.0-makefile.patch: - Fix install in sandbox - -*openbabel-perl-2.3.0 (25 Mar 2011) -*openbabel-perl-2.2.3 (25 Mar 2011) - - 25 Mar 2011; Justin Lecher <jlec@gentoo.org> -openbabel-perl-2.2.1.ebuild, - -openbabel-perl-2.2.2.ebuild, +openbabel-perl-2.2.3.ebuild, - +openbabel-perl-2.3.0.ebuild: - Semi broken perl support for openbael - - 10 Jul 2010; Andreas K. Huettel (dilfridge) <mail@akhuettel.de> - -openbabel-perl-2.2.0.ebuild, openbabel-perl-2.2.1.ebuild, - openbabel-perl-2.2.2.ebuild: - Silence repoman. Drop openbabel-perl-2.2.0 since dependencies cannot be - fulfilled anymore. - -*openbabel-perl-2.2.2 (19 Jul 2009) - - 19 Jul 2009; Reinis Danne <rei4dan@gmail.com> - +openbabel-perl-2.2.2.ebuild, +files/openbabel-perl-2.2.2-makefile.patch: - Version bump to 2.2.2 - -*openbabel-perl-2.2.1 (03 Mar 2009) - - 03 Mar 2009; Reinis Danne <rei4dan@gmail.com> - +files/openbabel-perl-2.2.1-makefile.patch, +openbabel-perl-2.2.1.ebuild: - Version bump to 2.2.1 - - 28 Feb 2009; Reinis Danne <rei4dan@gmail.com> openbabel-perl-2.2.0.ebuild: - Remove untested arches - - 21 Feb 2009; Reinis Danne <rei4dan@gmail.com> openbabel-perl-2.2.0.ebuild: - sci-chemistry/openbabel-perl: Use EAPI=2, fix swig use - -*openbabel-perl-2.2.0 (10 Feb 2009) - - 10 Feb 2009; Reinis Danne <rei4dan@gmail.com> - +files/openbabel-perl-2.2.0-makefile.patch, +metadata.xml, - +openbabel-perl-2.2.0.ebuild: - New package sci-chemistry/openbabel-perl, #212212 - diff --git a/sci-chemistry/openbabel-perl/Manifest b/sci-chemistry/openbabel-perl/Manifest deleted file mode 100644 index ef573ec3a..000000000 --- a/sci-chemistry/openbabel-perl/Manifest +++ /dev/null @@ -1,20 +0,0 @@ ------BEGIN PGP SIGNED MESSAGE----- -Hash: SHA1 - -AUX openbabel-perl-2.2.0-makefile.patch 1151 RMD160 8e46b23009c938f102874242b4539d912bc7f47e SHA1 cb5616215d3199170759c35968243bf0f9c846f5 SHA256 55f1b90d5e388401eecb56a3fdaf6b33a8eb2326a7a329605624ffd08e6ba81d -AUX openbabel-perl-2.2.1-makefile.patch 1151 RMD160 8e46b23009c938f102874242b4539d912bc7f47e SHA1 cb5616215d3199170759c35968243bf0f9c846f5 SHA256 55f1b90d5e388401eecb56a3fdaf6b33a8eb2326a7a329605624ffd08e6ba81d -AUX openbabel-perl-2.2.2-makefile.patch 1151 RMD160 8e46b23009c938f102874242b4539d912bc7f47e SHA1 cb5616215d3199170759c35968243bf0f9c846f5 SHA256 55f1b90d5e388401eecb56a3fdaf6b33a8eb2326a7a329605624ffd08e6ba81d -AUX openbabel-perl-2.3.0-makefile.patch 1765 RMD160 debf4cd445a8d997beb5686c57ce5723e4ed547d SHA1 7947bd8046523bbb87b471308874fd709b0d5b91 SHA256 07e7d4a02fe656ca74ea4bb9e05388010e5a2f1200d7a8ef688b87edf90d1359 -DIST openbabel-2.2.3.tar.gz 6624028 RMD160 4234baf9773aa6f918bb3fa5a25cab5f657f857e SHA1 e396b27551a106e001ca6c953181657a0a53f43f SHA256 eabc8bdbd68431f441b6b40adde0861b2e99750efd21bbb4870ee0a233feae46 -DIST openbabel-2.3.0.tar.gz 14321281 RMD160 96dafa3c2aca544f79e08b5617ab0da845c28a16 SHA1 408a4bddb7f052fd89c57ea51b4204b721856b16 SHA256 6dadcb256d83b1f2e616fa1853dd1afadb23550a20d1c118b406231a09f861fb -EBUILD openbabel-perl-2.2.3.ebuild 1234 RMD160 e3cdc94b23213790ff1ca933ef6f81437395c474 SHA1 f5c9ee17eb29bd708fe963e4316eeee113961d4e SHA256 d856a9d852d49d8762057f8f4e90f165637c8eb909d92b8ac92a17baf88e796d -EBUILD openbabel-perl-2.3.0.ebuild 1107 RMD160 e2c4abc262008b10eb8887ab577dea8879535c16 SHA1 d3d2c3478eef5d2b75c7fdddead158cc744feb8d SHA256 73cdbede3a36149f1006a9c4473ffeeb5323e19e067dbd4f3b6893d29eabcba5 -MISC ChangeLog 1806 RMD160 6e6dc964def48f4259f0a4b398a7fa43d0470ca4 SHA1 c293d1c6328b6ef75acdbda9c5d9669c8e39e4b9 SHA256 2a76a7be281e50a38b3622e7ca2ccd6dad9fcb1fa588bf8e37bc141ff4fbdc44 -MISC metadata.xml 627 RMD160 2eed792ed60ef1e4fe0aba88690f1fc4ff93b3e5 SHA1 d1e9cc0888dfedadb394def1835b272d11d91b38 SHA256 83b3a75fd868e56866941cba2671a75decc1e099e22709b3c6e799767f1e7253 ------BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.17 (GNU/Linux) - -iEYEARECAAYFAk2N/00ACgkQgAnW8HDreRan/gCfVmhtDVn2GUUOBk9fp8PIEF3w -n8QAni9xxpRV6sqgHpJpgdSWp/UkehXs -=JH7M ------END PGP SIGNATURE----- diff --git a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.0-makefile.patch b/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.0-makefile.patch deleted file mode 100644 index 4c5d4c69b..000000000 --- a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.0-makefile.patch +++ /dev/null @@ -1,25 +0,0 @@ ---- Makefile.PL.orig 2009-02-09 15:32:59.000000000 +0200 -+++ Makefile.PL 2009-02-09 15:49:44.000000000 +0200 -@@ -7,16 +7,15 @@ - @ENV{"LD_LIBRARY_PATH"}); - - $CC = 'g++'; --$srcdir = '../../src'; - - # check if we're compiling in the source directory - # check first for the static, then change to dynamic if available --$ldfrom = "\$(OBJECT) $srcdir/.libs/libopenbabel.a -lz" -- if (-r "$srcdir/.libs/libopenbabel.a") and (-s _) and (-B _); --$ldfrom = "\$(OBJECT) -L$srcdir/.libs -lopenbabel -lz" -- if (-r "$srcdir/.libs/libopenbabel.dylib") and (-s _) and (-B _); --$ldfrom = "\$(OBJECT) -L$srcdir/.libs -lopenbabel -lz" -- if (-r "$srcdir/.libs/libopenbabel.so") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) /usr/lib/libopenbabel.a -lz" -+ if (-r "/usr/lib/libopenbabel.a") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) -L/usr/lib -lopenbabel -lz" -+ if (-r "/usr/lib/libopenbabel.dylib") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) -L/usr/lib -lopenbabel -lz" -+ if (-r "/usr/lib/libopenbabel.so") and (-s _) and (-B _); - - # See lib/ExtUtils/MakeMaker.pm for details of how to influence - # the contents of the Makefile that is written. diff --git a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.1-makefile.patch b/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.1-makefile.patch deleted file mode 100644 index 4c5d4c69b..000000000 --- a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.1-makefile.patch +++ /dev/null @@ -1,25 +0,0 @@ ---- Makefile.PL.orig 2009-02-09 15:32:59.000000000 +0200 -+++ Makefile.PL 2009-02-09 15:49:44.000000000 +0200 -@@ -7,16 +7,15 @@ - @ENV{"LD_LIBRARY_PATH"}); - - $CC = 'g++'; --$srcdir = '../../src'; - - # check if we're compiling in the source directory - # check first for the static, then change to dynamic if available --$ldfrom = "\$(OBJECT) $srcdir/.libs/libopenbabel.a -lz" -- if (-r "$srcdir/.libs/libopenbabel.a") and (-s _) and (-B _); --$ldfrom = "\$(OBJECT) -L$srcdir/.libs -lopenbabel -lz" -- if (-r "$srcdir/.libs/libopenbabel.dylib") and (-s _) and (-B _); --$ldfrom = "\$(OBJECT) -L$srcdir/.libs -lopenbabel -lz" -- if (-r "$srcdir/.libs/libopenbabel.so") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) /usr/lib/libopenbabel.a -lz" -+ if (-r "/usr/lib/libopenbabel.a") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) -L/usr/lib -lopenbabel -lz" -+ if (-r "/usr/lib/libopenbabel.dylib") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) -L/usr/lib -lopenbabel -lz" -+ if (-r "/usr/lib/libopenbabel.so") and (-s _) and (-B _); - - # See lib/ExtUtils/MakeMaker.pm for details of how to influence - # the contents of the Makefile that is written. diff --git a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.2-makefile.patch b/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.2-makefile.patch deleted file mode 100644 index 4c5d4c69b..000000000 --- a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.2.2-makefile.patch +++ /dev/null @@ -1,25 +0,0 @@ ---- Makefile.PL.orig 2009-02-09 15:32:59.000000000 +0200 -+++ Makefile.PL 2009-02-09 15:49:44.000000000 +0200 -@@ -7,16 +7,15 @@ - @ENV{"LD_LIBRARY_PATH"}); - - $CC = 'g++'; --$srcdir = '../../src'; - - # check if we're compiling in the source directory - # check first for the static, then change to dynamic if available --$ldfrom = "\$(OBJECT) $srcdir/.libs/libopenbabel.a -lz" -- if (-r "$srcdir/.libs/libopenbabel.a") and (-s _) and (-B _); --$ldfrom = "\$(OBJECT) -L$srcdir/.libs -lopenbabel -lz" -- if (-r "$srcdir/.libs/libopenbabel.dylib") and (-s _) and (-B _); --$ldfrom = "\$(OBJECT) -L$srcdir/.libs -lopenbabel -lz" -- if (-r "$srcdir/.libs/libopenbabel.so") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) /usr/lib/libopenbabel.a -lz" -+ if (-r "/usr/lib/libopenbabel.a") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) -L/usr/lib -lopenbabel -lz" -+ if (-r "/usr/lib/libopenbabel.dylib") and (-s _) and (-B _); -+$ldfrom = "\$(OBJECT) -L/usr/lib -lopenbabel -lz" -+ if (-r "/usr/lib/libopenbabel.so") and (-s _) and (-B _); - - # See lib/ExtUtils/MakeMaker.pm for details of how to influence - # the contents of the Makefile that is written. diff --git a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.0-makefile.patch b/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.0-makefile.patch deleted file mode 100644 index 034b60907..000000000 --- a/sci-chemistry/openbabel-perl/files/openbabel-perl-2.3.0-makefile.patch +++ /dev/null @@ -1,28 +0,0 @@ - scripts/CMakeLists.txt | 2 +- - scripts/perl/Makefile.PL | 1 + - 2 files changed, 2 insertions(+), 1 deletions(-) - -diff --git a/scripts/CMakeLists.txt b/scripts/CMakeLists.txt -index bf2527b..3c45111 100644 ---- a/scripts/CMakeLists.txt -+++ b/scripts/CMakeLists.txt -@@ -223,7 +223,7 @@ if (DO_PERL_BINDINGS) - COMMAND ${CMAKE_COMMAND} -E copy ${openbabel_SOURCE_DIR}/scripts/perl/Makefile.PL ${openbabel_BINARY_DIR}/scripts/perl - COMMAND ${CMAKE_COMMAND} -E copy ${openbabel_SOURCE_DIR}/scripts/perl/OpenBabel.pm ${openbabel_BINARY_DIR}/scripts/perl - COMMAND ${CMAKE_COMMAND} -E copy ${openbabel_SOURCE_DIR}/scripts/perl/openbabel-perl.cpp ${openbabel_BINARY_DIR}/scripts/perl -- COMMAND PERL5LIB=${openbabel_SOURCE_DIR}/scripts/perl/inc SRC_DIR=${openbabel_SOURCE_DIR} OBJ_DIR=${openbabel_BINARY_DIR} ${PERL_EXECUTABLE} ${openbabel_BINARY_DIR}/scripts/perl/Makefile.PL ${PERL_PREFIX_TEXT} -+ COMMAND PERL5LIB=${openbabel_SOURCE_DIR}/scripts/perl/inc SRC_DIR=${openbabel_SOURCE_DIR} OBJ_DIR=${openbabel_BINARY_DIR} ${PERL_EXECUTABLE} ${openbabel_BINARY_DIR}/scripts/perl/Makefile.PL INSTALLDIRS=vendor ${PERL_PREFIX_TEXT} - COMMAND PERL5LIB=${openbabel_SOURCE_DIR}/scripts/perl/inc make - DEPENDS ${openbabel_SOURCE_DIR}/scripts/perl/openbabel-perl.cpp - WORKING_DIRECTORY ${openbabel_BINARY_DIR}/scripts/perl -diff --git a/scripts/perl/Makefile.PL b/scripts/perl/Makefile.PL -index a3a2116..44ad27d 100644 ---- a/scripts/perl/Makefile.PL -+++ b/scripts/perl/Makefile.PL -@@ -32,5 +32,6 @@ WriteMakefile( - 'CC' => $CC, - 'LD' => '$(CC)', - 'INC' => '-I../../include -I'.$cmakesrcdir.'/include', -+ 'DESTDIR' => @ENV{"ED"}, - 'OBJECT' => 'openbabel-perl.o' - ); diff --git a/sci-chemistry/openbabel-perl/metadata.xml b/sci-chemistry/openbabel-perl/metadata.xml deleted file mode 100644 index 7dd11d8d7..000000000 --- a/sci-chemistry/openbabel-perl/metadata.xml +++ /dev/null @@ -1,15 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> -<herd>sci-chemistry</herd> -<longdescription> -OpenBabel is a chemical toolbox designed to speak the many languages of -chemical data. It's an open, collaborative project allowing anyone to -search, convert, analyze, or store data from molecular modeling, chemistry, -solid-state materials, biochemistry, or related areas. This package enables -to access OpenBabel library from Python programs. -</longdescription> -<use> -<flag name='swig'>Enable SWIG language binding regeneration</flag> -</use> -</pkgmetadata> diff --git a/sci-chemistry/openbabel-perl/openbabel-perl-2.2.3.ebuild b/sci-chemistry/openbabel-perl/openbabel-perl-2.2.3.ebuild deleted file mode 100644 index 45ada92ac..000000000 --- a/sci-chemistry/openbabel-perl/openbabel-perl-2.2.3.ebuild +++ /dev/null @@ -1,70 +0,0 @@ -# Copyright 1999-2011 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -inherit eutils perl-module - -DESCRIPTION="Perl bindings for OpenBabel" -HOMEPAGE="http://openbabel.sourceforge.net/" -SRC_URI="mirror://sourceforge/openbabel/openbabel-${PV}.tar.gz" - -KEYWORDS="~amd64" -SLOT="0" -LICENSE="GPL-2" -IUSE="swig" - -RDEPEND=" - dev-lang/perl - ~sci-chemistry/openbabel-${PV}" -DEPEND="${RDEPEND} - swig? ( dev-lang/swig )" - -src_unpack() { - unpack ${A} - S="${WORKDIR}/openbabel-${PV}" - cd "${S}" - - econf \ - $(use_enable swig maintainer-mode) \ - --enable-static \ - || die "econf failed" - S="${S}/scripts" - cd "${S}" - if use swig ; then - emake -W openbabel-perl.i perl/openbabel_perl.cpp \ - || die "Failed to make SWIG perl bindings" - fi - S="${S}/perl" - cd "${S}" - epatch "${FILESDIR}/${P}-makefile.patch" \ - || die "Failed to apply ${P}-makefile.patch" -} - -src_compile() { - perl-module_src_prep - perl-module_src_compile -} - -src_test() { - emake test || die "make test failed" -} - -src_install() { - perl-module_src_install -} - -pkg_preinst() { - perl-module_pkg_preinst -} - -pkg_postinst() { - perl-module_pkg_postinst -} - -pkg_prerm() { - perl-module_pkg_prerm -} - -pkg_postrm() { - perl-module_pkg_postrm -} diff --git a/sci-chemistry/openbabel-perl/openbabel-perl-2.3.0.ebuild b/sci-chemistry/openbabel-perl/openbabel-perl-2.3.0.ebuild deleted file mode 100644 index d3688e13d..000000000 --- a/sci-chemistry/openbabel-perl/openbabel-perl-2.3.0.ebuild +++ /dev/null @@ -1,64 +0,0 @@ -# Copyright 1999-2011 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -EAPI="3" - -inherit cmake-utils eutils perl-module - -DESCRIPTION="Perl bindings for OpenBabel" -HOMEPAGE="http://openbabel.sourceforge.net/" -SRC_URI="mirror://sourceforge/openbabel/openbabel-${PV}.tar.gz" - -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -SLOT="0" -LICENSE="GPL-2" -IUSE="" - -RDEPEND=" - dev-lang/perl - ~sci-chemistry/openbabel-${PV}" -DEPEND="${RDEPEND}" - -S="${WORKDIR}/openbabel-${PV}" - -src_prepare() { - epatch "${FILESDIR}/${P}-makefile.patch" -} - -src_configure() { - local mycmakeargs="-DPERL_BINDINGS=ON" - cmake-utils_src_configure -} - -src_compile() { - cd "${WORKDIR}/${P}_build/scripts" - perl-module_src_prep - perl-module_src_compile -} - -src_test() { - cd "${WORKDIR}/${P}_build/scripts" - emake test || die "make test failed" -} - -src_install() { - cd "${WORKDIR}/${P}_build/scripts" - perl-module_src_install -} - -pkg_preinst() { - perl-module_pkg_preinst -} - -pkg_postinst() { - perl-module_pkg_postinst -} - -pkg_prerm() { - perl-module_pkg_prerm -} - -pkg_postrm() { - perl-module_pkg_postrm -} diff --git a/sci-chemistry/openbabel-python/ChangeLog b/sci-chemistry/openbabel-python/ChangeLog deleted file mode 100644 index 5255e1c77..000000000 --- a/sci-chemistry/openbabel-python/ChangeLog +++ /dev/null @@ -1,71 +0,0 @@ -# ChangeLog for sci-chemistry/openbabel-python -# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: $ - - 26 Mar 2011; Justin Lecher <jlec@gentoo.org> openbabel-python-2.3.0.ebuild: - Moved swig to DEPEND - - 25 Mar 2011; Reinis Danne <rei4dan@gmail.com> - openbabel-python-2.3.0.ebuild, - +files/openbabel-python-2.3.0-py3_iterator.patch, - +files/openbabel-python-2.3.0-wrap_OBInternalCoord.patch: - Add Python3 iterator and wrap OBInternalCoord patches, upstream r4399, - r4400 - - 25 Mar 2011; Justin Lecher <jlec@gentoo.org> openbabel-python-2.3.0.ebuild, - metadata.xml: - Cleaned ebuild - - 10 Mar 2011; Justin Lecher <jlec@gentoo.org> -openbabel-python-2.2.1.ebuild, - -openbabel-python-2.2.2.ebuild, openbabel-python-2.3.0.ebuild: - Correct Slots for gtk 3 introduction to tree - -*openbabel-python-2.3.0 (13 Nov 2010) - - 13 Nov 2010; Reinis Danne <rei4dan@gmail.com> - +openbabel-python-2.3.0.ebuild: - Version bump to 2.3.0 - - 10 Jul 2010; Andreas K. Huettel (dilfridge) <mail@akhuettel.de> - -openbabel-python-2.2.0.ebuild, openbabel-python-2.2.1.ebuild, - openbabel-python-2.2.2.ebuild: - Silence repoman. Drop openbabel-python-2.2.0 since dependencies cannot be - fulfilled anymore. - - 08 Dec 2009; Reinis Danne <rei4dan@gmail.com> - openbabel-python-2.2.2.ebuild: - Add blocker on openbabel[python], #288199 - -*openbabel-python-2.2.2 (19 Jul 2009) - - 19 Jul 2009; Reinis Danne <rei4dan@gmail.com> - +openbabel-python-2.2.2.ebuild: - Version bump to 2.2.2 - - 15 Mar 2009; Reinis Danne <rei4dan@gmail.com> - openbabel-python-2.2.1.ebuild: - Fix S - - 15 Mar 2009; Marcus D. Hanwell <cryos@gentoo.org> - sci-chemistry/openbabel-python/openbabel-python-2.2.1.ebuild: - Made some changes to the ebuild, do not configure in the src_unpack phase. - -*openbabel-python-2.2.1 (03 Mar 2009) - - 03 Mar 2009; Reinis Danne <rei4dan@gmail.com> - +openbabel-python-2.2.1.ebuild: - Version bump to 2.2.1 - - 28 Feb 2009; Reinis Danne <rei4dan@gmail.com> - openbabel-python-2.2.0.ebuild: - Add dependencies for OASA and PIL - - 21 Feb 2009; Reinis Danne <rei4dan@gmail.com> openbabel-python-2.2.0.ebuild: - sci-chemistry/openbabel-python: Use EAPI=2, fix swig use - -*openbabel-python-2.2.0 (10 Feb 2009) - - 10 Feb 2009; Reinis Danne <rei4dan@gmail.com> +metadata.xml, - +openbabel-python-2.2.0.ebuild: - New package sci-chemistry/openbabel-python, #212212 - diff --git a/sci-chemistry/openbabel-python/Manifest b/sci-chemistry/openbabel-python/Manifest deleted file mode 100644 index c65469ba2..000000000 --- a/sci-chemistry/openbabel-python/Manifest +++ /dev/null @@ -1,16 +0,0 @@ ------BEGIN PGP SIGNED MESSAGE----- -Hash: SHA1 - -AUX openbabel-python-2.3.0-py3_iterator.patch 346 RMD160 56692e9ab5ce307736a217e2c34121d055fcc5b9 SHA1 6e7dcffa4aa4d6c789b968598f97cc0ebb2165dd SHA256 d138acc218e006e5f5f2defb24c9183f8feae48a5d775788badde21fef77d68e -AUX openbabel-python-2.3.0-wrap_OBInternalCoord.patch 391 RMD160 d998f3b0cf238fdc925f5f1637630645232e956e SHA1 3a38395df0309b63368d841cba1255afda898133 SHA256 eae434b08f496d0c74b1f97b5b05df22075b11f048055efa902c9530d0f130d8 -DIST openbabel-2.3.0.tar.gz 14321281 RMD160 96dafa3c2aca544f79e08b5617ab0da845c28a16 SHA1 408a4bddb7f052fd89c57ea51b4204b721856b16 SHA256 6dadcb256d83b1f2e616fa1853dd1afadb23550a20d1c118b406231a09f861fb -EBUILD openbabel-python-2.3.0.ebuild 1322 RMD160 1cde3c9325f105e33121dc59493e3ed7fb49c88a SHA1 c1b289542e9b2ec99adaa8a2ac735e514e2d4bb1 SHA256 f56f348c2920bb43fc730feb9498f3e163f81591f3291ceb792a9944412202a7 -MISC ChangeLog 2370 RMD160 2b8f407470f144d217f2f94cd9a76e2eccba1872 SHA1 40fea5b500e14ccac8f273d2b9a34b1d12e7619f SHA256 7687e7c1d14a6281a063fc6470071b8d6c4150d87552e358cce44b8e0ca60366 -MISC metadata.xml 547 RMD160 685c790d772d3d340cc6506f9ddb0157f0bb1ee0 SHA1 621e3849da03363d9daf831344d275f0116dd95b SHA256 9ab03099df4d364cf5a858fe8127a0069cebe1bab7bf696ed8723c025048b6e6 ------BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.17 (GNU/Linux) - -iEYEARECAAYFAk2N+WcACgkQgAnW8HDreRa9nwCgmQw9HSdsHSdDPOwKLYKmYsGw -cOsAn2s/XANpCYWeh3Emu3BK4ylL1V5H -=Nrgx ------END PGP SIGNATURE----- diff --git a/sci-chemistry/openbabel-python/files/openbabel-python-2.3.0-py3_iterator.patch b/sci-chemistry/openbabel-python/files/openbabel-python-2.3.0-py3_iterator.patch deleted file mode 100644 index 7efc0cab8..000000000 --- a/sci-chemistry/openbabel-python/files/openbabel-python-2.3.0-py3_iterator.patch +++ /dev/null @@ -1,12 +0,0 @@ ---- scripts/openbabel-python.i 2010-08-16 15:05:20.000000000 +0300 -+++ scripts/openbabel-python.i 2011-02-27 14:18:17.000000000 +0200 -@@ -316,6 +316,9 @@ - def __iter__(self): - return self - -+ def __next__(self): -+ return self.next() -+ - def next(self): - if not self.finished: - b = self.iter.__ref__() diff --git a/sci-chemistry/openbabel-python/files/openbabel-python-2.3.0-wrap_OBInternalCoord.patch b/sci-chemistry/openbabel-python/files/openbabel-python-2.3.0-wrap_OBInternalCoord.patch deleted file mode 100644 index 934618929..000000000 --- a/sci-chemistry/openbabel-python/files/openbabel-python-2.3.0-wrap_OBInternalCoord.patch +++ /dev/null @@ -1,10 +0,0 @@ ---- scripts/openbabel-python.i 2010-08-16 15:05:20.000000000 +0300 -+++ scripts/openbabel-python.i 2011-02-25 22:46:08.000000000 +0200 -@@ -120,6 +120,7 @@ - VECTORTEMPLATE_WRAP(OBRing, OpenBabel::OBRing) - VECTORTEMPLATE_WRAP(pOBRing, OpenBabel::OBRing*) - VECTORTEMPLATE_WRAP(pOBGenericData, OpenBabel::OBGenericData*) -+VECTORTEMPLATE_WRAP(pOBInternalCoord, OpenBabel::OBInternalCoord*) - - } - diff --git a/sci-chemistry/openbabel-python/metadata.xml b/sci-chemistry/openbabel-python/metadata.xml deleted file mode 100644 index 78a71057d..000000000 --- a/sci-chemistry/openbabel-python/metadata.xml +++ /dev/null @@ -1,12 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> -<herd>sci-chemistry</herd> -<longdescription> -OpenBabel is a chemical toolbox designed to speak the many languages of -chemical data. It's an open, collaborative project allowing anyone to -search, convert, analyze, or store data from molecular modeling, chemistry, -solid-state materials, biochemistry, or related areas. This package enables -to access OpenBabel library from Python programs. -</longdescription> -</pkgmetadata> diff --git a/sci-chemistry/openbabel-python/openbabel-python-2.3.0.ebuild b/sci-chemistry/openbabel-python/openbabel-python-2.3.0.ebuild deleted file mode 100644 index 3360a5533..000000000 --- a/sci-chemistry/openbabel-python/openbabel-python-2.3.0.ebuild +++ /dev/null @@ -1,58 +0,0 @@ -# Copyright 1999-2011 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/openbabel/openbabel-2.2.3.ebuild,v 1.11 2010/07/18 14:53:22 armin76 Exp $ - -EAPI="3" - -PYTHON_DEPEND="2" -SUPPORT_PYTHON_ABIS="1" -PYTHON_MODNAME="openbabel.py pybel.py" - -inherit cmake-utils eutils distutils - -DESCRIPTION="Python bindings for OpenBabel (including Pybel)" -HOMEPAGE="http://openbabel.sourceforge.net/" -SRC_URI="mirror://sourceforge/openbabel/openbabel-${PV}.tar.gz" - -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" -SLOT="0" -LICENSE="GPL-2" -IUSE="" - -RDEPEND=" - dev-cpp/eigen:2 - dev-libs/libxml2:2 - !sci-chemistry/babel - ~sci-chemistry/openbabel-${PV} - sys-libs/zlib" -DEPEND="${RDEPEND} - =dev-lang/swig-2.0.1 - dev-util/cmake" - -S="${WORKDIR}"/openbabel-${PV} - -DISTUTILS_SETUP_FILES="${S}/scripts/python/setup.py" - -src_prepare() { - epatch \ - "${FILESDIR}"/${P}-wrap_OBInternalCoord.patch \ - "${FILESDIR}"/${P}-py3_iterator.patch -} - -src_configure() { - local mycmakeargs="-DPYTHON_BINDINGS=ON" - mycmakeargs="${mycmakeargs} - -DRUN_SWIG=ON" - cmake-utils_src_configure -} - -src_compile() { - cmake-utils_src_compile _openbabel - cd "${WORKDIR}/${P}_build/scripts" - distutils_src_compile -} - -src_install() { - cd "${WORKDIR}/${P}_build/scripts" - distutils_src_install -} diff --git a/sci-chemistry/openbabel-ruby/ChangeLog b/sci-chemistry/openbabel-ruby/ChangeLog deleted file mode 100644 index eb349a431..000000000 --- a/sci-chemistry/openbabel-ruby/ChangeLog +++ /dev/null @@ -1,34 +0,0 @@ -# ChangeLog for sci-chemistry/openbabel-ruby -# Copyright 1999-2010 Gentoo Foundation; Distributed under the GPL v2 -# $Header: $ - - 10 Jul 2010; Andreas K. Huettel (dilfridge) <mail@akhuettel.de> - -openbabel-ruby-2.2.0.ebuild, openbabel-ruby-2.2.1.ebuild, - openbabel-ruby-2.2.2.ebuild: - Silence repoman. Drop openbabel-ruby-2.2.0 since dependencies cannot be - fulfilled anymore. - -*openbabel-ruby-2.2.2 (19 Jul 2009) - - 19 Jul 2009; Reinis Danne <rei4dan@gmail.com> - +openbabel-ruby-2.2.2.ebuild: - Version bump to 2.2.2 - -*openbabel-ruby-2.2.1 (03 Mar 2009) - - 03 Mar 2009; Reinis Danne <rei4dan@gmail.com> - +openbabel-ruby-2.2.1.ebuild: - Version bump to 2.2.1 - - 28 Feb 2009; Reinis Danne <rei4dan@gmail.com> openbabel-ruby-2.2.0.ebuild: - Remove untested arches - - 21 Feb 2009; Reinis Danne <rei4dan@gmail.com> openbabel-ruby-2.2.0.ebuild: - sci-chemistry/openbabel-ruby: Use EAPI=2, fix swig use - -*openbabel-ruby-2.2.0 (10 Feb 2009) - - 10 Feb 2009; Reinis Danne <rei4dan@gmail.com> +metadata.xml, - +openbabel-ruby-2.2.0.ebuild: - New package sci-chemistry/openbabel-ruby, #212212 - diff --git a/sci-chemistry/openbabel-ruby/Manifest b/sci-chemistry/openbabel-ruby/Manifest deleted file mode 100644 index f0ddf0cf2..000000000 --- a/sci-chemistry/openbabel-ruby/Manifest +++ /dev/null @@ -1,26 +0,0 @@ ------BEGIN PGP SIGNED MESSAGE----- -Hash: SHA1 - -DIST openbabel-2.2.1.tar.gz 6507473 RMD160 47c6afecc1a7c847052dcb8570eee89a52416586 SHA1 736fc5b69851d72b58545c5ba8c2bbd361d64e46 SHA256 822345d70778de1d2d9afe65a659f1719b8ca300066fb1fa2f473bc97c457e80 -DIST openbabel-2.2.2.tar.gz 6621343 RMD160 95c5da693c0d34e85c0f97f23318251b89a47ddb SHA1 eff94c92f1f0e7e834874e2964056f538fa1574a SHA256 9db35a4d0c7aa26fdf845136ac883b44488740769d64c60cbcf1e68be2bcd051 -EBUILD openbabel-ruby-2.2.1.ebuild 1021 RMD160 2a9561f0fb0d8da6b7946d256e115216a867f610 SHA1 f0811a3d6da0e138c658652b4fb2986f4cb979e1 SHA256 e71b2c62dd9b855a792dff107132e45cbf0790ff4487703fedb7385274eeef9d -EBUILD openbabel-ruby-2.2.2.ebuild 1017 RMD160 3cbce5cc522e3a02966933d1de004edad3ded5c3 SHA1 3479bf1c9df189661edb395865b3245eabda14a4 SHA256 f1df52bbdde438cd2e1ac45653de0cc6437fe185386b5251185842f45c2d27de -MISC ChangeLog 1090 RMD160 1f5c924c20a4482b1e80c755dd1f7ebd009ece64 SHA1 8aad275b36de200bb7d4c6cd96c7245fc57b4e35 SHA256 d21a01054ab475868db28636d36336473475af0bc253fccdfb0ebf65247e7a18 -MISC metadata.xml 625 RMD160 d3c16a993a9e9160f25dc78f9082a0a0cb1c18d5 SHA1 6bac7911ea4b78ab2be8bf35035494e6df295446 SHA256 453256dd8e051900cfe45c9b91d040a299c90fc677fd48125454645f1d78a212 ------BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.15 (GNU/Linux) - -iQIcBAEBAgAGBQJMOOmsAAoJENwGBM22xffeEM0P/judJosKPIpvzt93Nl5E4wXq -N9P4pgnM5P0qdEXvXvS6c1fNXBYnk0KTQ518SslaXVfVdD9uljuxcKenhlXeoX0O -PsTtDBDeKTTyrETXc4DEr0gaV5Nt7A0DnWaEn0nXAjhYaZhhl3skRs7NDd3cHX96 -r1C3qWBgdaEQ005A813guUSJOaxKFDmZz1HvKvuDMb7qyd1NzoFXOUdkjJakFHxy -a6jFsFdPvUnDw+y+5WLlT6YbLeDz4l7zFNiMLxJPlaRdhyEYVwk7jcCSegg2eWrV -hLX0khL7qujJO61liNZ92CpQZUq5wJ3F9fIzGMCSKrNaqz08XJQX8bjYIu0Wh86X -A5xTnUzT4HVknMUMWg1JH9iwE3QNZNWkiSCEIuLSxKXuWcL7orz38B/M2eIjJmeo -WmgoPcHqjqy2oShd+rsdgTXGZg8BjGnFZWhCu3SjX3AXP81Hz6tWldRMEO/TRAV8 -20+8yDm+B0rN3mGUzzazRZsQndbmt7w3XCrxdak3tsTY7gCkyl0bnABQ2fYKemAr -fLI+QUWOjMmS9v3z2BAtbZYLbZXn7S1p/FqenBs1ko6ZdjBqeAbvRk3r+HbGYmuF -ipcKCbryJNP7m/rQ+R9rexUalNPPSIxyMb/ROj0Ed6MVP4p9HNv/umgpXvjuNqiU -iT2iIE0NTrJ/n1g8IOF4 -=45zH ------END PGP SIGNATURE----- diff --git a/sci-chemistry/openbabel-ruby/metadata.xml b/sci-chemistry/openbabel-ruby/metadata.xml deleted file mode 100644 index fa7d96abb..000000000 --- a/sci-chemistry/openbabel-ruby/metadata.xml +++ /dev/null @@ -1,15 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> -<herd>sci-chemistry</herd> -<longdescription> -OpenBabel is a chemical toolbox designed to speak the many languages of -chemical data. It's an open, collaborative project allowing anyone to -search, convert, analyze, or store data from molecular modeling, chemistry, -solid-state materials, biochemistry, or related areas. This package enables -to access OpenBabel library from Ruby programs. -</longdescription> -<use> -<flag name='swig'>Enable SWIG language binding regeneration</flag> -</use> -</pkgmetadata> diff --git a/sci-chemistry/openbabel-ruby/openbabel-ruby-2.2.1.ebuild b/sci-chemistry/openbabel-ruby/openbabel-ruby-2.2.1.ebuild deleted file mode 100644 index 97c1d8ee2..000000000 --- a/sci-chemistry/openbabel-ruby/openbabel-ruby-2.2.1.ebuild +++ /dev/null @@ -1,49 +0,0 @@ -# Copyright 1999-2010 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -inherit eutils - -DESCRIPTION="Ruby bindings for OpenBabel" -HOMEPAGE="http://openbabel.sourceforge.net/" -SRC_URI="mirror://sourceforge/openbabel/openbabel-${PV}.tar.gz" - -KEYWORDS="~amd64" -SLOT="0" -LICENSE="GPL-2" -IUSE="swig" - -RDEPEND="~sci-chemistry/openbabel-${PV} - dev-lang/ruby" - -DEPEND="${RDEPEND} - swig? ( >=dev-lang/swig-1.3.38 )" - -src_unpack() { - unpack ${A} - S="${WORKDIR}/openbabel-${PV}" - cd "${S}" - - econf \ - $(use_enable swig maintainer-mode) \ - --enable-static \ - || die "econf failed" - S="${S}/scripts" - cd "${S}" - if use swig ; then - emake -W openbabel-ruby.i ruby/openbabel_ruby.cpp \ - || die "Failed to make SWIG ruby bindings" - fi - S="${S}/ruby" - cd "${S}" -} - -src_compile() { - ruby ./extconf.rb || die "ruby setup config failed" - emake || die "ruby setup make failed" -} - -src_install() { - emake -j1 DESTDIR="${D}" install || die "ruby setup make install failed" - dodoc README -} diff --git a/sci-chemistry/openbabel-ruby/openbabel-ruby-2.2.2.ebuild b/sci-chemistry/openbabel-ruby/openbabel-ruby-2.2.2.ebuild deleted file mode 100644 index 49c06a8d1..000000000 --- a/sci-chemistry/openbabel-ruby/openbabel-ruby-2.2.2.ebuild +++ /dev/null @@ -1,49 +0,0 @@ -# Copyright 1999-2010 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -inherit eutils - -DESCRIPTION="Ruby bindings for OpenBabel" -HOMEPAGE="http://openbabel.sourceforge.net/" -SRC_URI="mirror://sourceforge/openbabel/openbabel-${PV}.tar.gz" - -KEYWORDS="~amd64" -SLOT="0" -LICENSE="GPL-2" -IUSE="swig" - -RDEPEND="~sci-chemistry/openbabel-${PV} - dev-lang/ruby" - -DEPEND="${RDEPEND} - swig? ( >=dev-lang/swig-1.3.39 )" - -src_unpack() { - unpack ${A} - S="${WORKDIR}/openbabel-${PV}" - cd "${S}" - - econf \ - $(use_enable swig maintainer-mode) \ - --enable-static \ - || die "econf failed" - S="${S}/scripts" - cd "${S}" - if use swig ; then - emake -W openbabel-ruby.i ruby/openbabel_ruby.cpp \ - || die "Failed to make SWIG ruby bindings" - fi - S="${S}/ruby" - cd "${S}" -} - -src_compile() { - ruby ./extconf.rb || die "ruby setup config failed" - emake || die "ruby setup make failed" -} - -src_install() { - emake DESTDIR="${D}" install || die "ruby setup make install failed" - dodoc README -} diff --git a/sci-chemistry/openbabel/ChangeLog b/sci-chemistry/openbabel/ChangeLog deleted file mode 100644 index 832ee7b49..000000000 --- a/sci-chemistry/openbabel/ChangeLog +++ /dev/null @@ -1,37 +0,0 @@ -# ChangeLog for sci-chemistry/openbabel -# Copyright 1999-2011 Gentoo Foundation; Distributed under the GPL v2 -# $Header: $ - - 25 Mar 2011; Justin Lecher <jlec@gentoo.org> openbabel-2.3.0.ebuild: - keyworded for ~x86 - - 25 Mar 2011; Justin Lecher <jlec@gentoo.org> openbabel-2.3.0.ebuild: - Removed python again - - 25 Mar 2011; Justin Lecher <jlec@gentoo.org> openbabel-2.3.0.ebuild: - Removed python again - - 25 Mar 2011; Justin Lecher <jlec@gentoo.org> openbabel-2.3.0.ebuild: - Removed python again - - 25 Mar 2011; Justin Lecher <jlec@gentoo.org> openbabel-2.3.0.ebuild, - metadata.xml: - Cleaned ebuild - - 07 Mar 2011; Justin Lecher <jlec@gentoo.org> openbabel-2.3.0.ebuild: - Correct Slots for gtk 3 introduction to tree - - 14 Nov 2010; Reinis Danne <rei4dan@gmail.com> openbabel-2.3.0.ebuild, - +files/openbabel-2.3.0-test_lib_path.patch: - Fix library path for tests. - - 14 Nov 2010; Reinis Danne <rei4dan@gmail.com> openbabel-2.3.0.ebuild, - metadata.xml: - Use system libinchi, add gui USE-flag and build tests only if requerd. - -*openbabel-2.3.0 (13 Nov 2010) - - 13 Nov 2010; Reinis Danne <rei4dan@gmail.com> +openbabel-2.3.0.ebuild, - +metadata.xml: - Version bump. - diff --git a/sci-chemistry/openbabel/Manifest b/sci-chemistry/openbabel/Manifest deleted file mode 100644 index 273e98d05..000000000 --- a/sci-chemistry/openbabel/Manifest +++ /dev/null @@ -1,15 +0,0 @@ ------BEGIN PGP SIGNED MESSAGE----- -Hash: SHA1 - -AUX openbabel-2.3.0-test_lib_path.patch 637 RMD160 08d27b2de2aa7c323808373d5874dd4fd08528c9 SHA1 f5539ee8e213444f05965b3636f0bf1edd7212a7 SHA256 3f6e2f4ba94a85cb901f37142097fd74a484c948c17123af3bd646ad48ea8517 -DIST openbabel-2.3.0.tar.gz 14321281 RMD160 96dafa3c2aca544f79e08b5617ab0da845c28a16 SHA1 408a4bddb7f052fd89c57ea51b4204b721856b16 SHA256 6dadcb256d83b1f2e616fa1853dd1afadb23550a20d1c118b406231a09f861fb -EBUILD openbabel-2.3.0.ebuild 1465 RMD160 b6b132ce832c81dc46e5e90bd8d0f96019baff04 SHA1 0a070e88eb0014b233cd8f1e883a30913f8b2dc1 SHA256 62e9f947af2e6b67f0d7a4e956210c5a0d2b2e8f001452eb44ab41f389bfc1bb -MISC ChangeLog 1176 RMD160 3739b4a7166a1fbafd1f6fc6c6e361f437c24707 SHA1 4e056686051d59695da05d807ceeec112a2f46a0 SHA256 a130f39187172a1b732bc86b9fcdaf2c555648c62f504e11e18dd316f66171aa -MISC metadata.xml 490 RMD160 443b08385246148cc37ad53df59658eabcb07cf3 SHA1 4a031d5b463dbcc4fea187c155f4771ee57683fc SHA256 dba1cb37e8e79e9816a15bcad3ceeffd991572ddad57ad58607ebb110a79b5a5 ------BEGIN PGP SIGNATURE----- -Version: GnuPG v2.0.17 (GNU/Linux) - -iEYEARECAAYFAk2Mx7IACgkQgAnW8HDreRbZTACbB8A0RaDgMLxgHx7LI4uUP6dy -n0UAn0hd9MjNgPoTzsFHLOwCw/1iQLc7 -=DlBw ------END PGP SIGNATURE----- diff --git a/sci-chemistry/openbabel/files/openbabel-2.3.0-test_lib_path.patch b/sci-chemistry/openbabel/files/openbabel-2.3.0-test_lib_path.patch deleted file mode 100644 index 014da6bcd..000000000 --- a/sci-chemistry/openbabel/files/openbabel-2.3.0-test_lib_path.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff -ru old/openbabel-2.3.0/test/CMakeLists.txt new/openbabel-2.3.0/test/CMakeLists.txt ---- old/openbabel-2.3.0/test/CMakeLists.txt 2010-10-26 17:39:01.000000000 +0300 -+++ new/openbabel-2.3.0/test/CMakeLists.txt 2010-11-14 18:13:32.000000000 +0200 -@@ -2,7 +2,7 @@ - add_definitions(-DTESTDATADIR="\\"${CMAKE_SOURCE_DIR}/test/files/\\"") - - # define FORMATDIR for location of format plugin binaries --add_definitions(-DFORMATDIR="\\"${openbabel_BINARY_DIR}/lib/\\"") -+add_definitions(-DFORMATDIR="\\"${openbabel_BINARY_DIR}/lib${LIB_SUFFIX}/\\"") - - ########################################################### - # new tests using obtest.h diff --git a/sci-chemistry/openbabel/metadata.xml b/sci-chemistry/openbabel/metadata.xml deleted file mode 100644 index d0238ddef..000000000 --- a/sci-chemistry/openbabel/metadata.xml +++ /dev/null @@ -1,11 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <herd>sci-chemistry</herd> - <longdescription> - Open Babel is a chemical toolbox designed to speak the many languages of - chemical data. It's an open, collaborative project allowing anyone to - search, convert, analyze, or store data from molecular modeling, chemistry, - solid-state materials, biochemistry, or related areas. - </longdescription> -</pkgmetadata> diff --git a/sci-chemistry/openbabel/openbabel-2.3.0.ebuild b/sci-chemistry/openbabel/openbabel-2.3.0.ebuild deleted file mode 100644 index 242e58a49..000000000 --- a/sci-chemistry/openbabel/openbabel-2.3.0.ebuild +++ /dev/null @@ -1,64 +0,0 @@ -# Copyright 1999-2011 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: /var/cvsroot/gentoo-x86/sci-chemistry/openbabel/openbabel-2.2.3.ebuild,v 1.11 2010/07/18 14:53:22 armin76 Exp $ - -EAPI="3" - -WX_GTK_VER="2.8" - -inherit cmake-utils eutils wxwidgets - -DESCRIPTION="Interconverts file formats used in molecular modeling" -HOMEPAGE="http://openbabel.sourceforge.net/" -SRC_URI="mirror://sourceforge/openbabel/${P}.tar.gz" - -KEYWORDS="~amd64 ~x86" -SLOT="0" -LICENSE="GPL-2" -IUSE="doc wxwidgets" - -RDEPEND=" - dev-cpp/eigen:2 - dev-libs/libxml2:2 - !sci-chemistry/babel - sci-libs/inchi - sys-libs/zlib - wxwidgets? ( x11-libs/wxGTK:2.8[X] )" -DEPEND="${RDEPEND} - >=dev-util/cmake-2.4.8" - -DOCS="AUTHORS ChangeLog NEWS README THANKS doc/*.inc doc/README* doc/*.mol2" - -src_prepare() { - epatch "${FILESDIR}"/${P}-test_lib_path.patch -} - -src_configure() { - local mycmakeargs="" - mycmakeargs="${mycmakeargs} - -DOPENBABEL_USE_SYSTEM_INCHI=ON - $(cmake-utils_use wxwidgets BUILD_GUI)" - - cmake-utils_src_configure -} - -src_install() { - dohtml doc/{*.html,*.png} || die - if use doc ; then - insinto /usr/share/doc/${PF}/API/html - doins doc/API/html/* || die - fi - cmake-utils_src_install -} - -src_test() { - local mycmakeargs="" - mycmakeargs="${mycmakeargs} - -DOPENBABEL_USE_SYSTEM_INCHI=ON - $(cmake-utils_use wxwidgets BUILD_GUI) - $(cmake-utils_use_enable test TESTS)" - - cmake-utils_src_configure - cmake-utils_src_compile - cmake-utils_src_test -} |