Add sci-libs/pmx

3 files changed, 49 insertions, 0 deletions

diff --git a/sci-libs/pmx/ChangeLog b/sci-libs/pmx/ChangeLog
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+++ b/sci-libs/pmx/ChangeLog
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+# ChangeLog for sci-libs/pmx
+# Copyright 1999-2014 Gentoo Foundation; Distributed under the GPL v2
+# $Header: $
+
+*pmx-9999 (09 Jan 2014)
+
+  09 Jan 2014; Reinis Danne <rei4dan@gmail.com> +pmx-9999.ebuild,
+  +metadata.xml:
+  New ebuild.
+
diff --git a/sci-libs/pmx/metadata.xml b/sci-libs/pmx/metadata.xml
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+++ b/sci-libs/pmx/metadata.xml
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+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
+<pkgmetadata>
+  <herd>sci-chemistry</herd>
+  <longdescription>
+	pmx (formerly pymacs) has started as a small bunch of classes to read
+	structure files such as pdb or gro and trajectory data in gromacs xtc
+	format. Over the years it has been extended towards a versatile (bio-)
+	molecular structure manipulation package with some additional
+	functionalities, e.g. gromacs file parsers and scripts for setup and
+	analysis of free energy calculations.
+  </longdescription>
+</pkgmetadata>
diff --git a/sci-libs/pmx/pmx-9999.ebuild b/sci-libs/pmx/pmx-9999.ebuild
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index 000000000..2d073e420
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+++ b/sci-libs/pmx/pmx-9999.ebuild
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+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+PYTHON_COMPAT=( python{2_6,2_7} )
+
+inherit eutils distutils-r1 git-r3
+
+DESCRIPTION="Python library to read PDB, GRO or Gromacs XTC files"
+HOMEPAGE="http://code.google.com/p/pmx"
+EGIT_REPO_URI="https://code.google.com/p/${PN}.git"
+EGIT_NONSHALLOW=true
+
+LICENSE="LGPL-3"
+SLOT="0"
+IUSE=""
+
+DEPEND="${DEPEND}
+		sci-chemistry/gromacs
+		sci-libs/scipy[${PYTHON_USEDEP}]
+		dev-python/numpy[${PYTHON_USEDEP}]
+		"
+
+RDEPEND="${DEPEND}"