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author | Andrew Ammerlaan <andrewammerlaan@riseup.net> | 2021-01-20 10:40:39 +0100 |
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committer | Andrew Ammerlaan <andrewammerlaan@riseup.net> | 2021-01-20 10:40:39 +0100 |
commit | 2497d3d59d9e67dcc67eb8687964e57d18b6993c (patch) | |
tree | 3d51d86eccd674b9319a1d5b97a076b2f4a1eeef /sci-libs | |
parent | sci-libs/nipy: drop old: failed REQUIRED_USE: py_targets_py3_7 (diff) | |
download | sci-2497d3d59d9e67dcc67eb8687964e57d18b6993c.tar.gz sci-2497d3d59d9e67dcc67eb8687964e57d18b6993c.tar.bz2 sci-2497d3d59d9e67dcc67eb8687964e57d18b6993c.zip |
sci-libs/nipype: drop old failed REQUIRED_USE: py_targets_py3_7
Package-Manager: Portage-3.0.13, Repoman-3.0.2
Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
Diffstat (limited to 'sci-libs')
-rw-r--r-- | sci-libs/nipype/Manifest | 2 | ||||
-rw-r--r-- | sci-libs/nipype/nipype-1.1.1-r2.ebuild | 70 | ||||
-rw-r--r-- | sci-libs/nipype/nipype-1.4.2.ebuild | 67 |
3 files changed, 0 insertions, 139 deletions
diff --git a/sci-libs/nipype/Manifest b/sci-libs/nipype/Manifest index cbf353bd7..a3c77d4ff 100644 --- a/sci-libs/nipype/Manifest +++ b/sci-libs/nipype/Manifest @@ -1,3 +1 @@ -DIST nipype-1.1.1.tar.gz 3353518 BLAKE2B 509b6c2b18aab8c8ddfad3ca4ac87401caf0608ee566edecaa20a4329a3bfd9d67dae730ac45342600b4026b66c5043d753d09e5230269d3fc4b946d049ad11e SHA512 dba749ff3b53dfe19992a27f9ad9aedcd360b51b3bf7233bf4b83387ae7181425b27ef43d23747553e9f8eb368b6769d6bec62650e1303ec353dde4de84f1769 -DIST nipype-1.4.2.tar.gz 2823870 BLAKE2B 3af3a5e45fada174908723afd8c747575cba4c8489cd894fdced68a5b10b0638f871c600df921b61a4e809c43ea3b827539410ed713f14829d60f207d5bd8cfd SHA512 f913d1a63105ccb8392adfdba5ec52b3e5ce0c9ad145b062f6e551a811602b77a52f1f6e89d9d5ff366e9b063f0ab965cfbd6ae5f68a79e25e8970e1a864901c DIST nipype-1.5.0.tar.gz 2735317 BLAKE2B d618714b15defde52325bac32a80449846b448d1c141a21f9d950976c8c89624d714dbab10b4cd99fe20d4eb99ceb4095ebc6ddc567f57b3803e2c16ffda155a SHA512 eb11096a090855278c3e76ffe9643ab4de046a017511ba51f59448fd8cf9d67a4f6c552acbbbdd38065cfb456c24fd21299cf698fa05c5be507524622f28ac85 diff --git a/sci-libs/nipype/nipype-1.1.1-r2.ebuild b/sci-libs/nipype/nipype-1.1.1-r2.ebuild deleted file mode 100644 index 734fae8fc..000000000 --- a/sci-libs/nipype/nipype-1.1.1-r2.ebuild +++ /dev/null @@ -1,70 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -PYTHON_COMPAT=( python3_7 ) -PYTHON_REQ_USE="threads(+),sqlite" - -inherit distutils-r1 - -DESCRIPTION="Neuroimaging in Python: Pipelines and Interfaces" -HOMEPAGE="http://nipy.sourceforge.net/nipype/" -SRC_URI="https://github.com/nipy/nipype/archive/${PV}.tar.gz -> ${P}.tar.gz" - -LICENSE="BSD" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="test" -RESTRICT="!test? ( test )" - -DEPEND=" - dev-python/future[${PYTHON_USEDEP}] - dev-python/numpy[${PYTHON_USEDEP}] - dev-python/prov[${PYTHON_USEDEP}] - dev-python/setuptools[${PYTHON_USEDEP}] - sci-libs/nibabel[${PYTHON_USEDEP}] - test? ( - dev-python/mock[${PYTHON_USEDEP}] - dev-python/pytest[${PYTHON_USEDEP}] - ${RDEPEND} - ) -" -# Dependency disabled as upstream test configuration which requires it fails -#dev-python/pytest-xdist[${PYTHON_USEDEP}] - -RDEPEND=" - >=dev-python/click-6.6[${PYTHON_USEDEP}] - dev-python/networkx[${PYTHON_USEDEP}] - dev-python/packaging[${PYTHON_USEDEP}] - dev-python/pydot[${PYTHON_USEDEP}] - dev-python/pydotplus[${PYTHON_USEDEP}] - dev-python/pygraphviz[${PYTHON_USEDEP}] - dev-python/python-dateutil[${PYTHON_USEDEP}] - dev-python/simplejson[${PYTHON_USEDEP}] - dev-python/traits[${PYTHON_USEDEP}] - dev-python/scipy[${PYTHON_USEDEP}] -" - -src_prepare() { - sed -i\ - -e "/'pytest>=%s' % PYTEST_MIN_VERSION,/d"\ - -e "/'pytest-xdist',$/d"\ - -e "/'prov==%s' % PROV_VERSION,/d"\ - nipype/info.py || die - sed -i\ - -e "s/prov==1\.5\.0/prov/g"\ - requirements.txt rtd_requirements.txt || die - default -} - -python_test() { - pytest -vv\ - || die - # Upstream test configuration fails - #-c nipype/pytest.ini\ - #--doctest-modules nipype\ - #--cov nipype\ - #--cov-config .coveragerc\ - #--cov-report xml:cov.xml\ -} diff --git a/sci-libs/nipype/nipype-1.4.2.ebuild b/sci-libs/nipype/nipype-1.4.2.ebuild deleted file mode 100644 index 1f91463b6..000000000 --- a/sci-libs/nipype/nipype-1.4.2.ebuild +++ /dev/null @@ -1,67 +0,0 @@ -# Copyright 1999-2020 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -PYTHON_COMPAT=( python3_7 ) -PYTHON_REQ_USE="threads(+),sqlite" - -inherit distutils-r1 - -DESCRIPTION="Neuroimaging in Python: Pipelines and Interfaces" -HOMEPAGE="http://nipy.sourceforge.net/nipype/" -SRC_URI="https://github.com/nipy/nipype/archive/${PV}.tar.gz -> ${P}.tar.gz" - -LICENSE="BSD" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="test" -RESTRICT="!test? ( test )" - -DEPEND=" - dev-python/numpy[${PYTHON_USEDEP}] - dev-python/prov[${PYTHON_USEDEP}] - sci-libs/nibabel[${PYTHON_USEDEP}] - test? ( - dev-python/mock[${PYTHON_USEDEP}] - dev-python/pytest[${PYTHON_USEDEP}] - ${RDEPEND} - ) -" -# Dependency disabled as upstream test configuration which requires it fails -#dev-python/pytest-xdist[${PYTHON_USEDEP}] - -RDEPEND=" - >=dev-python/click-6.6[${PYTHON_USEDEP}] - dev-python/filelock[${PYTHON_USEDEP}] - dev-python/networkx[${PYTHON_USEDEP}] - dev-python/packaging[${PYTHON_USEDEP}] - dev-python/pydot[${PYTHON_USEDEP}] - dev-python/pydotplus[${PYTHON_USEDEP}] - dev-python/python-dateutil[${PYTHON_USEDEP}] - dev-python/scipy[${PYTHON_USEDEP}] - dev-python/simplejson[${PYTHON_USEDEP}] - dev-python/traits[${PYTHON_USEDEP}] -" -#etelemetry and neurdflib - -src_prepare() { - sed -i \ - -e "/def test_no_et(tmp_path):/i@pytest.mark.skip('Known to fail by upstream: https://github.com/nipy/nipype/issues/3196#issuecomment-606003186')" \ - nipype/tests/test_nipype.py || die - sed -i \ - -e "/def test_fslversion():/i@pytest.mark.skip('Known to fail by upstream: https://github.com/nipy/nipype/issues/3196#issuecomment-605997462')" \ - nipype/interfaces/fsl/tests/test_base.py || die - default -} - -python_test() { - NIPYPE_NO_ET=1 pytest -vv\ - || die - # Upstream test configuration fails - #-c nipype/pytest.ini\ - #--doctest-modules nipype\ - #--cov nipype\ - #--cov-config .coveragerc\ - #--cov-report xml:cov.xml\ -} |