sci-physics/root: version bump

Version bump in 5.32 and 5.34 branches.

11 files changed, 1054 insertions, 0 deletions

diff --git a/sci-physics/root/ChangeLog b/sci-physics/root/ChangeLog
index f98dcd98a..77624c155 100644
--- a/sci-physics/root/ChangeLog
+++ b/sci-physics/root/ChangeLog
@@ -2,6 +2,18 @@
 # Copyright 1999-2012 Gentoo Foundation; Distributed under the GPL v2
 # $Header: /var/cvsroot/gentoo-x86/sci-physics/root/ChangeLog,v 1.96 2012/03/29 18:21:49 bicatali Exp $
 
+*root-5.34.02 (19 Oct 2012)
+*root-5.32.04 (19 Oct 2012)
+
+  19 Oct 2012; Andrew Savchenko <bircoph@gmail.com>
+  +files/root-5.28.00b-asneeded.patch,
+  +files/root-5.28.00b-nobyte-compile.patch,
+  +files/root-5.28.00h-explicit-functions.patch,
+  +files/root-5.32.00-dotfont.patch,
+  +files/root-5.32.00-explicit-functions.patch, +root-5.32.04.ebuild,
+  +files/root-5.34.01-glibc216.patch, +root-5.34.02.ebuild:
+  Version bump for 5.32.04 and 5.34.02 patch releases.
+
   23 Jul 2012; Andrew Savchenko <bircoph@gmail.com>
   -files/root-5.28.00b-asneeded.patch, -files/root-5.32.00-dotfont.patch:
   Update User's Guide. Remove old.
diff --git a/sci-physics/root/Manifest b/sci-physics/root/Manifest
index 407893b71..f2b3bb8d4 100644
--- a/sci-physics/root/Manifest
+++ b/sci-physics/root/Manifest
@@ -1,6 +1,9 @@
+DIST ROOTUsersGuide-5.34.02.pdf 9137216 SHA256 b69908af895804e824470078fa32974974a492d8e5db81c2f4b67c68b091c98d SHA512 874316975b28a820badd3c116238005870d4bf559b0c86349293ee9bdc2d0fedc763658ff5f03b8ef4565ecbee9a014de55472c126c4b94b97cb3b103b9c5968 WHIRLPOOL ffc66e18396334e44566be1609177b9e9dab5ea7c72be0ac0ec1fb9aea528a53ce3a8be397ada15e805a43d8edc2293e5f1b1ef551ed3dc2a1619fdf0227e4f0
 DIST ROOTUsersGuide.pdf 9124822 SHA256 70a96c4a2573dc0d320142f86993ecfda24caa755e910340a3014120f2997c8b SHA512 c3b4c18ef2e13968afdf67c6003249d4cfe6ea661fa32ce25127361bae7e3376a25cd3b11591292f3975bcd8105291aca52f2f6214c9fe45f4bd6e7e44d54b25 WHIRLPOOL 11256ba7837d17e5795cf71ac32db43d7d8f797bfbddf5f71612fe2f8fb2e01354372c0ea8f0bc22868881eb0bfdc8a3e3f1b05293d2750d293aa4d59217b2e6
 DIST RooFit_Users_Manual_2.91-33.pdf 1330062 SHA256 101c4e4c41962238fcabf1caa86cafc51241a1800594491b2e62ef8b565a5646 SHA512 732d7dea3541b51e5f0b9b5b70dae57e1bdbb2504c4222d5e5095ec0f9b67307011c1f31c2c95be419b53dd8426f52f62f6c9370084208176a2ed3d7f25d783b WHIRLPOOL 033897bef4bdb13246a81ea6749f7895e6c4d639752e932130234ad9153bb399a4e5d416237850da27f139d3cccc53d9adb7a077abf20d257ce057157d6c3696
 DIST TMVAUsersGuide-v4.03.pdf 3913533 SHA256 0cdbb4a2d19eb7a86e2911cfa73a905932e862d6c94be10b7662a9355b0241af SHA512 d8bb2ce35ef32c4877059898f56513db0b1057924e21935a3d3a6f114748e167984c43fd2ec7e54197fccff875540543968fea9a8e75bf63f5f13521724a7ddb WHIRLPOOL 0a3e2e61e8e32f3a22757178adf033f9fbb89014aecd4df7f8bd49677d772bb3ad2c0f5526259611879f6bb20df647c01e23f53ade483d7a3e2242f8aee6c6aa
 DIST info.png 2060 SHA256 51de6661250f3fb71c6c8250cbc4bdc4dc4283cc90240b4dc1ee6168e8d40279 SHA512 81a730eefbe7a7e15d5840491402c7644bf7ed5d5f8f3830ed9457b343cc7882480e993ea84aef93500742cd0fe8469859cd2c925e5582b91ef56406804ae276 WHIRLPOOL 02ea6daf9e3d21947ebf5dd01c455a13f2fcbf9981be34a150056a3510122ca49e3d137d4f242c7218d4d06ace09566d513a04f09071723ac244f5a38e982bac
 DIST root-banner.png 132555 SHA256 d165e1cc175f654ff79af39193a6144678f600e14a53dd20e2b216b3e8951e94 SHA512 139347f396e88c8062d847d612949204cb80e551a826d926950ca8ab967f0d496487fed17a227fc796ae4db23fca758d91a0af7943142adbed358e98d7667b1f WHIRLPOOL dd23e26acf9303b404cda8135d6946af3b1abba3dfdff8d80e56096f810d50a01ebfb52dc1e6ee1d1b99fbb5859dc850e0e368155339b5007294d95ce8909857
+DIST root_v5.32.04.source.tar.gz 55526502 SHA256 0c0130ba3d74b86caee3071deeceb46545cfde34def8ad2107601e133506acf2 SHA512 796d7f6fe92700232da3fcaac042438e13c13e504179a7375105b2ff06e1fac571ef4d59f270d73844b2a481b0762a873985d22eee2b1a0b156071b777d4417a WHIRLPOOL c5ce0f81331e08b3f79e97c894bff60185bba562388e789d3d1716d3523045a55c24e1cebded4ad19a09023c4b5275fd7d44acb726a1f248a9616ed95addd609
+DIST root_v5.34.02.source.tar.gz 56243895 SHA256 401ae3b69a397e0ab557faf640a13f49f8aab41dc03b4e7ebddbe37be32fedb1 SHA512 3f8da0e78e2be7a3961b97e6da0bc6957f74c51f4356a273a996a081b6ec9ce62311d89bd3aa3bbfcd3a7e47ea8324ebc6565eae40b72a9c85aa7a7c7b18fd79 WHIRLPOOL 1ca36f02a7f060f946b5c5a578fe8edf710da5bbc257dacd6dbbf513c95738e73da58915acb90322f38094a383b9cf34f24ea17f982da6ae8069abe25ab96cac
 DIST rootdrawing-logo.png 15051 SHA256 1dfd913cad53a3ebd6bf560d14df918cab5a295cc7d155944a8e27284af83a6b SHA512 14aa13ebfed3c9412d7d7d04c250740b25fe3af6bcb07e618045a5cec2dc23698a251fd7df2db1a6c37331084db99b029b387ea81c25ac825fc7ae10ad164a68 WHIRLPOOL 877a959a5aead73ba69dbb805c9869cbd6a047ea476bd4e7fef80781563a61d20dad49dd4d8b0005bfc58e8f7c7d38efbb3e085a95974feb81dfc9e339c18741
diff --git a/sci-physics/root/files/root-5.28.00b-asneeded.patch b/sci-physics/root/files/root-5.28.00b-asneeded.patch
new file mode 100644
index 000000000..b845247e1
--- /dev/null
+++ b/sci-physics/root/files/root-5.28.00b-asneeded.patch
@@ -0,0 +1,20 @@
+--- root.orig/configure	2010-12-20 07:17:54.000000000 +0000
++++ root/configure	2010-12-20 07:16:05.000000000 +0000
+@@ -709,7 +709,7 @@
+        cat <<EOF > conftest.mk
+ include ${ac_srcdir}/config/Makefile.${arch}
+ conftest: conftest.c
+-	\$(CC) \$(CFLAGS) \$(LDFLAGS) $linkdir $linklib \$< -o \$@
++	\$(CC) \$(CFLAGS) \$(LDFLAGS) \$< $linkdir $linklib  -o \$@
+ 
+ conftest.c:
+ 	echo "int main() { return 0; }" > \$@
+@@ -723,7 +723,7 @@
+        cat <<EOF > conftest.mk
+ include ${ac_srcdir}/config/Makefile.${arch}
+ conftest:conftest.c
+-	\$(CC) \$(CFLAGS) \$(LDFLAGS) $linkdir $linklib \$< -o \$@
++	\$(CC) \$(CFLAGS) \$(LDFLAGS) \$< $linkdir $linklib -o \$@
+ 
+ conftest.c:
+ 	echo "extern int $linksymbol (); " > \$@
diff --git a/sci-physics/root/files/root-5.28.00b-nobyte-compile.patch b/sci-physics/root/files/root-5.28.00b-nobyte-compile.patch
new file mode 100644
index 000000000..7029bf169
--- /dev/null
+++ b/sci-physics/root/files/root-5.28.00b-nobyte-compile.patch
@@ -0,0 +1,138 @@
+diff -Naur root.orig/Makefile root/Makefile
+--- root.orig/Makefile	2010-12-17 22:48:40.577775091 +0300
++++ root/Makefile	2010-12-17 22:49:27.902497903 +0300
+@@ -1148,10 +1148,7 @@
+ 	   if test "x$(RFLX_GRFLXPY)" != "x"; then \
+ 	      rm -f $(DESTDIR)$(LIBDIR)/$(RFLX_GRFLXPY); \
+ 	   fi; \
+-	   if test "x$(RFLX_GRFLXPYC)" != "x"; then \
+-	      rm -f $(DESTDIR)$(LIBDIR)/$(RFLX_GRFLXPYC); \
+-	   fi; \
+-	   if test "x$(RFLX_GRFLXPY)$(RFLX_GRFLXPYC)" != "x"; then \
++	   if test "x$(RFLX_GRFLXPY)" != "x"; then \
+ 	      dir=$(RFLX_GRFLXDD:lib/=); \
+ 	      while test "x$${dir}" != "x" && \
+ 	         test -d $(DESTDIR)$(LIBDIR)/$${dir} && \
+diff -Naur root.orig/bindings/pyroot/Module.mk root/bindings/pyroot/Module.mk
+--- root.orig/bindings/pyroot/Module.mk	2010-12-17 22:48:39.941179413 +0300
++++ root/bindings/pyroot/Module.mk	2010-12-17 22:49:27.899164943 +0300
+@@ -48,8 +48,6 @@
+ ROOTPY       := $(subst $(MODDIR),$(LPATH),$(ROOTPYS))
+ $(LPATH)/%.py: $(MODDIR)/%.py; cp $< $@
+ endif
+-ROOTPYC      := $(ROOTPY:.py=.pyc)
+-ROOTPYO      := $(ROOTPY:.py=.pyo)
+ 
+ # used in the main Makefile
+ ALLHDRS      += $(patsubst $(MODDIRI)/%.h,include/%.h,$(PYROOTH))
+@@ -68,10 +66,8 @@
+ include/%.h:    $(PYROOTDIRI)/%.h
+ 		cp $< $@
+ 
+-%.pyc: %.py;    python -c 'import py_compile; py_compile.compile( "$<" )'
+-%.pyo: %.py;    python -O -c 'import py_compile; py_compile.compile( "$<" )'
+ 
+-$(PYROOTLIB):   $(PYROOTO) $(PYROOTDO) $(ROOTPY) $(ROOTPYC) $(ROOTPYO) \
++$(PYROOTLIB):   $(PYROOTO) $(PYROOTDO) $(ROOTPY) \
+                 $(ROOTLIBSDEP) $(PYTHONLIBDEP)
+ 		@$(MAKELIB) $(PLATFORM) $(LD) "$(LDFLAGS)" \
+ 		  "$(SOFLAGS)" libPyROOT.$(SOEXT) $@ \
+@@ -113,7 +109,7 @@
+ 
+ distclean-$(MODNAME): clean-$(MODNAME)
+ 		@rm -f $(PYROOTDEP) $(PYROOTDS) $(PYROOTDH) $(PYROOTLIB) \
+-		   $(ROOTPY) $(ROOTPYC) $(ROOTPYO) $(PYROOTMAP) \
++		   $(ROOTPY) $(PYROOTMAP) \
+ 		   $(PYROOTPYD) $(PYTHON64DEP) $(PYTHON64)
+ 
+ distclean::     distclean-$(MODNAME)
+diff -Naur root.orig/build/package/debian/rules root/build/package/debian/rules
+--- root.orig/build/package/debian/rules	2010-12-17 22:48:40.197817461 +0300
++++ root/build/package/debian/rules	2010-12-17 22:49:27.902497903 +0300
+@@ -623,10 +623,6 @@
+ 		-X$(SYSCONFDIR)/root/system.rootauthrc			\
+ 		-X$(SYSCONFDIR)/root/system.rootdaemonrc		\
+ 		-X$(PREFIX)/lib/root/$(SOVERS)/libAfterImage.a		\
+-		-X$(PREFIX)/lib/root/$(SOVERS)/PyCintex.pyc		\
+-		-X$(PREFIX)/lib/root/$(SOVERS)/PyCintex.pyo		\
+-		-X$(PREFIX)/lib/root/$(SOVERS)/ROOT.pyc			\
+-		-X$(PREFIX)/lib/root/$(SOVERS)/ROOT.pyo			
+ #		$(foreach i, \
+ #		   $(wildcard $(DTMP)/$(PREFIX)/lib/root/lib*.so.$(SOVERS)), \
+ #		    -X$(i:$(DTMP)/%=%) )
+diff -Naur root.orig/cint/cintex/Module.mk root/cint/cintex/Module.mk
+--- root.orig/cint/cintex/Module.mk	2010-12-17 22:48:40.057833071 +0300
++++ root/cint/cintex/Module.mk	2010-12-17 22:49:27.902497903 +0300
+@@ -31,10 +31,6 @@
+ CINTEXPY     := $(subst $(MODDIR)/python,$(LPATH),$(CINTEXPYS))
+ $(LPATH)/%.py: $(MODDIR)/python/%.py; cp $< $@
+ endif
+-ifneq ($(BUILDPYTHON),no)
+-CINTEXPYC    := $(CINTEXPY:.py=.pyc)
+-CINTEXPYO    := $(CINTEXPY:.py=.pyo)
+-endif
+ 
+ # used in the main Makefile
+ ALLHDRS      += $(patsubst $(MODDIRI)/Cintex/%.h,include/Cintex/%.h,$(CINTEXH))
+@@ -86,8 +82,6 @@
+ 		fi)
+ 		cp $< $@
+ 
+-%.pyc: %.py;    python -c 'import py_compile; py_compile.compile( "$<" )'
+-%.pyo: %.py;    python -O -c 'import py_compile; py_compile.compile( "$<" )'
+ 
+ $(CINTEXLIB):   $(CINTEXO) $(CINTEXPY) $(CINTEXPYC) $(CINTEXPYO) \
+                 $(ORDER_) $(subst $(CINTEXLIB),,$(MAINLIBS)) $(CINTEXLIBDEP)
+diff -Naur root.orig/cint/reflex/Module.mk root/cint/reflex/Module.mk
+--- root.orig/cint/reflex/Module.mk	2010-12-17 22:48:40.037835301 +0300
++++ root/cint/reflex/Module.mk	2010-12-17 22:51:36.871451359 +0300
+@@ -48,9 +48,6 @@
+ RFLX_GRFLXS   := $(wildcard $(RFLX_GRFLXSD)/*.py)
+ RFLX_GRFLXPY  := $(patsubst $(RFLX_GRFLXSD)/%.py,$(RFLX_GRFLXDD)/%.py,$(RFLX_GRFLXS))
+ RFLX_GRFLXPY  += $(RFLX_GCCXMLPATHPY)
+-ifneq ($(BUILDPYTHON),no)
+-RFLX_GRFLXPYC := $(subst .py,.pyc,$(RFLX_GRFLXPY))
+-endif
+ 
+ RFLX_LIBDIR = $(LIBDIR)
+ 
+@@ -92,7 +89,7 @@
+ 
+ ALLEXECS += $(RFLX_GENMAPX)
+ 
+-POSTBIN  += $(RFLX_GRFLXPYC) $(RFLX_GRFLXPY)
++POSTBIN  += $(RFLX_GRFLXPY)
+ 
+ ##### local rules #####
+ .PHONY:         all-$(MODNAME) clean-$(MODNAME) distclean-$(MODNAME) \
+@@ -122,8 +119,6 @@
+ 		  mkdir -p lib/python/genreflex; fi )
+ 		cp $< $@
+ 
+-$(RFLX_GRFLXDD)/%.pyc: $(RFLX_GRFLXDD)/%.py
+-		@python -c 'import py_compile; py_compile.compile( "$<" )'
+ 
+ $(RFLX_GENMAPO) : CXXFLAGS += -I$(REFLEXDIRS)/genmap
+ 
+@@ -149,7 +144,7 @@
+ 		$(RLIBMAP) -o $@ -l $(REFLEXDICTLIB) \
+ 		   -d $(REFLEXDICTLIBDEPM) -c $(REFLEXL)
+ 
+-all-$(MODNAME): $(REFLEXLIB) $(REFLEXDICTLIB) $(REFLEXDICTMAP) $(RFLX_GRFLXPYC) $(RFLX_GRFLXPY)
++all-$(MODNAME): $(REFLEXLIB) $(REFLEXDICTLIB) $(REFLEXDICTMAP) $(RFLX_GRFLXPY)
+ 
+ clean-genreflex:
+ 		@rm -rf lib/python/genreflex
+diff -Naur root.orig/cint/reflex/python/CMakeLists.txt root/cint/reflex/python/CMakeLists.txt
+--- root.orig/cint/reflex/python/CMakeLists.txt	2010-12-17 22:48:40.037835301 +0300
++++ root/cint/reflex/python/CMakeLists.txt	2010-12-17 22:49:27.902497903 +0300
+@@ -15,7 +15,7 @@
+ #####################   sources   ####################
+ 
+ FILE(GLOB_RECURSE GENREFLEX_SRCS RELATIVE ${CMAKE_CURRENT_SOURCE_DIR} genreflex/*.py)
+-SET(GENREFLEX_SCRIPT ${CMAKE_CURRENT_BINARY_DIR}/genreflex/genreflex.pyc PARENT_SCOPE)
++SET(GENREFLEX_SCRIPT PARENT_SCOPE)
+ 
+ #####################  gccxmlpath ####################
+ 
+
diff --git a/sci-physics/root/files/root-5.28.00h-explicit-functions.patch b/sci-physics/root/files/root-5.28.00h-explicit-functions.patch
new file mode 100644
index 000000000..918b696cb
--- /dev/null
+++ b/sci-physics/root/files/root-5.28.00h-explicit-functions.patch
@@ -0,0 +1,12 @@
+--- root/io/io/Module.mk.orig	2011-11-24 20:12:56.000000000 +0400
++++ root/io/io/Module.mk	2012-03-09 03:45:42.850549826 +0400
+@@ -67,9 +67,4 @@
+ distclean::     distclean-$(MODNAME)
+ 
+ ##### extra rules ######
+-#ifeq ($(GCC_VERS_FULL),gcc-4.4.0)
+-ifeq ($(GCC_VERS),gcc-4.4)
+-ifneq ($(filter -O%,$(OPT)),)
+    $(call stripsrc,$(IODIRS)/TStreamerInfoReadBuffer.o): CXXFLAGS += -DR__EXPLICIT_FUNCTION_INSTANTIATION
+-endif
+-endif
diff --git a/sci-physics/root/files/root-5.32.00-dotfont.patch b/sci-physics/root/files/root-5.32.00-dotfont.patch
new file mode 100644
index 000000000..85d6dea76
--- /dev/null
+++ b/sci-physics/root/files/root-5.32.00-dotfont.patch
@@ -0,0 +1,58 @@
+--- root/html/src/TClassDocOutput.cxx.orig	2012-05-25 16:18:10.000000000 +0400
++++ root/html/src/TClassDocOutput.cxx	2012-05-29 21:36:53.813593012 +0400
+@@ -625,7 +625,7 @@
+       << "size=\"8,10\";" << endl
+       << "ratio=auto;" << endl
+       << "margin=0;" << endl
+-      << "node [shape=plaintext,fontsize=40,width=4,height=0.75];" << endl
++      << "node [shape=plaintext,fontsize=40,width=4,height=0.75,fontname=\"DejaVu Serif\"];" << endl
+       << "\"" << fCurrentClass->GetName() << "\" [shape=ellipse];" << endl;
+ 
+    std::stringstream ssDep;
+@@ -704,7 +704,7 @@
+             outdot << ";" << endl;
+          } else if (writeAndMoreFor) {
+                outdot << "  \"...andmore" << writeAndMoreFor->GetName()
+-                      << "\" [label=\"...and more\",fontname=\"Times-Italic\",fillcolor=lightgrey,style=filled];" << endl;
++                      << "\" [label=\"...and more\",fontname=\"DejaVu Serif Italic\",fillcolor=lightgrey,style=filled];" << endl;
+          }
+       }
+       if (!levelExists) break;
+@@ -733,7 +733,7 @@
+       << "ranksep=0.1;" << endl
+       << "nodesep=0;" << endl
+       << "margin=0;" << endl;
+-   outdot << "  node [style=filled,width=0.7,height=0.15,fixedsize=true,shape=plaintext,fontsize=10];" << endl;
++   outdot << "  node [style=filled,width=0.7,height=0.15,fixedsize=true,shape=plaintext,fontsize=10,fontname=\"DejaVu Serif\"];" << endl;
+ 
+    std::stringstream ssDep;
+    const int numColumns = 3;
+@@ -939,7 +939,7 @@
+       << "ranksep=0;" << endl
+       << "nodesep=0;" << endl
+       << "size=\"8,10\";" << endl
+-      << "node [fontsize=20,shape=plaintext];" << endl;
++      << "node [fontsize=20,shape=plaintext,fontname=\"DejaVu Serif\"];" << endl;
+ 
+    for (std::list<std::string>::iterator iFile = listFilesToParse.begin();
+       iFile != listFilesToParse.end(); ++iFile) {
+@@ -999,7 +999,8 @@
+       << "ranksep=0.7;" << endl
+       << "nodesep=0.3;" << endl
+       << "size=\"8,8\";" << endl
+-      << "ratio=compress;" << endl;
++      << "ratio=compress;" << endl
++      << "node [fontname=\"DejaVu Serif\"];" << endl;
+ 
+    TString libs(fCurrentClass->GetSharedLibs());
+    outdot << "\"All Libraries\" [URL=\"LibraryDependencies.html\",shape=box,rank=max,fillcolor=lightgray,style=filled];" << endl;
+@@ -1109,7 +1110,8 @@
+ 
+    dotout << "digraph G {" << endl
+           << "ratio=auto;" << endl
+-          << "rankdir=RL;" << endl;
++          << "rankdir=RL;" << endl
++          << "node [fontname=\"DejaVu Serif\"];" << endl;
+ 
+    // loop on all classes
+    TClassDocInfo* cdi = 0;
diff --git a/sci-physics/root/files/root-5.32.00-explicit-functions.patch b/sci-physics/root/files/root-5.32.00-explicit-functions.patch
new file mode 100644
index 000000000..570d61e68
--- /dev/null
+++ b/sci-physics/root/files/root-5.32.00-explicit-functions.patch
@@ -0,0 +1,18 @@
+--- root/io/io/Module.mk.orig	2012-02-29 19:46:38.000000000 +0400
++++ root/io/io/Module.mk	2012-03-09 02:29:19.905665572 +0400
+@@ -67,15 +67,5 @@
+ distclean::     distclean-$(MODNAME)
+ 
+ ##### extra rules ######
+-#ifeq ($(GCC_VERS_FULL),gcc-4.4.0)
+-ifeq ($(GCC_VERS),gcc-4.4)
+-ifneq ($(filter -O%,$(OPT)),)
+    $(call stripsrc,$(IODIRS)/TStreamerInfoReadBuffer.o): CXXFLAGS += -DR__EXPLICIT_FUNCTION_INSTANTIATION
+-endif
+-endif
+-ifeq ($(GCC_VERS),gcc-4.5)
+-ifneq ($(filter -O%,$(OPT)),)
+    $(call stripsrc,$(IODIRS)/TStreamerInfoReadBuffer.o): CXXFLAGS += -DR__EXPLICIT_FUNCTION_INSTANTIATION
+-endif
+-endif
+-
diff --git a/sci-physics/root/files/root-5.34.01-glibc216.patch b/sci-physics/root/files/root-5.34.01-glibc216.patch
new file mode 100644
index 000000000..b2da15970
--- /dev/null
+++ b/sci-physics/root/files/root-5.34.01-glibc216.patch
@@ -0,0 +1,35 @@
+diff -ur root-5.34.00.orig/build/rmkdepend/main.c root-5.34.00/build/rmkdepend/main.c
+--- root-5.34.00.orig/build/rmkdepend/main.c	2012-06-05 15:31:46.000000000 +0200
++++ root-5.34.00/build/rmkdepend/main.c	2012-07-05 20:42:58.938953353 +0200
+@@ -60,7 +60,7 @@
+ #  endif
+ # elif defined(__CYGWIN__)
+ extern int fchmod(int, mode_t);
+-#else
++# elif !defined(__GLIBC__) || __GLIBC__ < 2 || (__GLIBC__ == 2 && __GLIBC_MINOR__ < 16)
+ extern int fchmod(int, int);
+ # endif
+ #endif
+diff -ur root-5.34.00.orig/cint/tool/rmkdepend/main.c root-5.34.00/cint/tool/rmkdepend/main.c
+--- root-5.34.00.orig/cint/tool/rmkdepend/main.c	2012-06-05 15:31:30.000000000 +0200
++++ root-5.34.00/cint/tool/rmkdepend/main.c	2012-07-05 20:42:58.492949104 +0200
+@@ -58,7 +58,7 @@
+ #if !defined(MAC_OS_X_VERSION_10_4)
+ extern int fchmod();
+ #endif
+-#else
++#elif !defined(__GLIBC__) || __GLIBC__ < 2 || (__GLIBC__ == 2 && __GLIBC_MINOR__ < 16)
+ extern int fchmod();
+ #endif
+ #endif
+diff -ur root-5.34.00.orig/core/unix/src/TUnixSystem.cxx root-5.34.00/core/unix/src/TUnixSystem.cxx
+--- root-5.34.00.orig/core/unix/src/TUnixSystem.cxx	2012-06-05 15:31:17.000000000 +0200
++++ root-5.34.00/core/unix/src/TUnixSystem.cxx	2012-07-05 20:29:29.969242837 +0200
+@@ -98,6 +98,7 @@
+ #include <pwd.h>
+ #include <grp.h>
+ #include <errno.h>
++#include <sys/resource.h>
+ #include <sys/wait.h>
+ #include <time.h>
+ #include <sys/time.h>
diff --git a/sci-physics/root/metadata.xml b/sci-physics/root/metadata.xml
index bea83067e..705abb61a 100644
--- a/sci-physics/root/metadata.xml
+++ b/sci-physics/root/metadata.xml
@@ -17,6 +17,7 @@
 </longdescription>
 	<use>
 		<flag name="c++0x"> Build ROOT using the C++11 standard. Not supported, requires <pkg>sys-devel/gcc</pkg>&gt;=4.7.0</flag>
+		<flag name="clarens"> Build the Clarens and PEAC plug-ins, to use in a GRID enabled analysis</flag>
 		<flag name="fits">Support for images and data from FITS files with <pkg>sci-libs/cfitsio</pkg></flag>
 		<flag name="geocad">Enable ROOT-CAD interface using <pkg>sci-libs/opencascade</pkg></flag>
 		<flag name="htmldoc">Generate html documentation</flag>
diff --git a/sci-physics/root/root-5.32.04.ebuild b/sci-physics/root/root-5.32.04.ebuild
new file mode 100644
index 000000000..1e6d66388
--- /dev/null
+++ b/sci-physics/root/root-5.32.04.ebuild
@@ -0,0 +1,378 @@
+# Copyright 1999-2012 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/root/root-5.32.03-r2.ebuild,v 1.5 2012/10/16 18:50:45 jlec Exp $
+
+EAPI=4
+
+PYTHON_DEPEND="python? 2"
+
+if [[ ${PV} == "9999" ]] ; then
+	_SVN=subversion
+	ESVN_REPO_URI="https://root.cern.ch/svn/root/trunk"
+	ESVN_OPTIONS="--non-interactive --trust-server-cert"
+	SRC_URI=""
+	KEYWORDS=""
+else
+	SRC_URI="ftp://root.cern.ch/${PN}/${PN}_v${PV}.source.tar.gz"
+	KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+fi
+
+inherit elisp-common eutils fdo-mime fortran-2 multilib python toolchain-funcs user ${_SVN}
+
+ROOFIT_DOC_PV=2.91-33
+TMVA_DOC_PV=4.03
+PATCH_PV=5.28.00b
+PATCH_PV2=5.32.00
+
+DESCRIPTION="C++ data analysis framework and interpreter from CERN"
+HOMEPAGE="http://root.cern.ch/"
+SRC_URI="${SRC_URI}
+	doc? ( ftp://root.cern.ch/${PN}/doc/ROOTUsersGuide.pdf
+		math? (
+			ftp://root.cern.ch/${PN}/doc/RooFit_Users_Manual_${ROOFIT_DOC_PV}.pdf
+			http://tmva.sourceforge.net/docu/TMVAUsersGuide.pdf -> TMVAUsersGuide-v${TMVA_DOC_PV}.pdf )
+		htmldoc? (
+			http://root.cern.ch/drupal/sites/default/files/rootdrawing-logo.png
+			http://root.cern.ch/drupal/sites/all/themes/newsflash/images/blue/root-banner.png
+			http://root.cern.ch/drupal/sites/all/themes/newsflash/images/info.png ) )"
+
+SLOT="0"
+LICENSE="LGPL-2.1"
+IUSE="+X afs avahi clarens doc emacs examples fits fftw graphviz htmldoc kerberos
+	ldap +math mpi mysql odbc +opengl openmp oracle postgres prefix pythia6
+	pythia8 python qt4 +reflex ruby ssl xft xinetd xml xrootd"
+
+CDEPEND="
+	app-arch/xz-utils
+	>=dev-lang/cfortran-4.4-r2
+	dev-libs/libpcre
+	media-fonts/dejavu
+	media-libs/freetype
+	media-libs/giflib
+	media-libs/libpng:0
+	media-libs/tiff:0
+	sys-libs/zlib
+	virtual/jpeg
+	virtual/shadow
+	X? (
+		media-libs/ftgl
+		media-libs/glew
+		x11-libs/libX11
+		x11-libs/libXext
+		x11-libs/libXpm
+		|| (
+			>=media-libs/libafterimage-1.20[gif,jpeg,png,tiff]
+			>=x11-wm/afterstep-2.2.11[gif,jpeg,png,tiff]
+		)
+		opengl? ( virtual/opengl virtual/glu x11-libs/gl2ps )
+		qt4? (
+			x11-libs/qt-gui:4
+			x11-libs/qt-opengl:4
+			x11-libs/qt-qt3support:4
+			x11-libs/qt-svg:4
+			x11-libs/qt-webkit:4
+			x11-libs/qt-xmlpatterns:4 )
+		xft? ( x11-libs/libXft )
+		)
+	afs? ( net-fs/openafs )
+	avahi? ( net-dns/avahi )
+	clarens? ( dev-libs/xmlrpc-c[curl] )
+	emacs? ( virtual/emacs )
+	fits? ( sci-libs/cfitsio )
+	fftw? ( sci-libs/fftw:3.0 )
+	graphviz? ( media-gfx/graphviz )
+	kerberos? ( virtual/krb5 )
+	ldap? ( net-nds/openldap )
+	math? ( sci-libs/gsl sci-mathematics/unuran mpi? ( virtual/mpi ) )
+	mysql? ( virtual/mysql )
+	odbc? ( || ( dev-db/libiodbc dev-db/unixODBC ) )
+	oracle? ( dev-db/oracle-instantclient-basic )
+	postgres? ( dev-db/postgresql-base )
+	pythia6? ( sci-physics/pythia:6 )
+	pythia8? ( sci-physics/pythia:8 )
+	ruby? (
+			dev-lang/ruby
+			dev-ruby/rubygems )
+	ssl? ( dev-libs/openssl )
+	xml? ( dev-libs/libxml2 )
+	xrootd? ( net-libs/xrootd )"
+
+DEPEND="${CDEPEND}
+	virtual/pkgconfig"
+
+RDEPEND="${CDEPEND}
+	reflex? ( dev-cpp/gccxml )
+	xinetd? ( sys-apps/xinetd )"
+
+PDEPEND="htmldoc? ( ~app-doc/root-docs-${PV} )"
+
+REQUIRED_USE="
+	!X? ( !opengl !qt4 !xft )
+	mpi? ( math !openmp )
+	openmp? ( math !mpi )"
+
+S="${WORKDIR}/${PN}"
+
+pkg_setup() {
+	fortran-2_pkg_setup
+	python_pkg_setup
+	echo
+	elog "There are extra options on packages not yet in Gentoo:"
+	elog "AliEn, castor, Chirp, dCache, gfal, gLite, Globus,"
+	elog "HDFS, Monalisa, MaxDB/SapDB, SRP."
+	elog "You can use the env variable EXTRA_ECONF variable for this."
+	elog "For example, for SRP, you would set: "
+	elog "EXTRA_ECONF=\"--enable-srp --with-srp-libdir=/usr/$(get_libdir)\""
+	echo
+	enewgroup rootd
+	enewuser rootd -1 -1 /var/spool/rootd rootd
+
+	if use math; then
+		if use openmp; then
+			if [[ $(tc-getCC)$ == *gcc* ]] && ! tc-has-openmp; then
+				ewarn "You are using a gcc without OpenMP capabilities"
+				die "Need an OpenMP capable compiler"
+			else
+				export USE_OPENMP=1 USE_PARALLEL_MINUIT2=1
+			fi
+		elif use mpi; then
+			export USE_MPI=1 USE_PARALLEL_MINUIT2=1
+		fi
+	fi
+}
+
+src_prepare() {
+	epatch \
+		"${FILESDIR}"/${PN}-${PATCH_PV}-prop-ldflags.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV}-asneeded.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV2}-nobyte-compile.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV}-glibc212.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV}-unuran.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV2}-afs.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV2}-cfitsio.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV2}-chklib64.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV2}-explicit-functions.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV2}-dotfont.patch
+
+	# make sure we use system libs and headers
+	rm montecarlo/eg/inc/cfortran.h README/cfortran.doc || die
+	rm -rf graf2d/asimage/src/libAfterImage || die
+	rm -rf graf3d/ftgl/{inc,src} || die
+	rm -rf graf2d/freetype/src || die
+	rm -rf graf3d/glew/{inc,src} || die
+	rm -rf core/pcre/src || die
+	rm -rf math/unuran/src/unuran-*.tar.gz || die
+	LANG=C LC_ALL=C find core/zip -type f -name "[a-z]*" -print0 | xargs -0 rm -f || die
+	rm -rf core/lzma/src/*.tar.gz || die
+	rm graf3d/gl/{inc,src}/gl2ps.* || die
+	sed -i -e 's/^GLLIBS *:= .* $(OPENGLLIB)/& -lgl2ps/' graf3d/gl/Module.mk || die
+
+	# In Gentoo, libPythia6 is called libpythia6
+	# libungif is called libgif,
+	# iodbc is in /usr/include/iodbc
+	# pg_config.h is checked instead of libpq-fe.h
+	sed -i \
+		-e 's:libPythia6:libpythia6:g' \
+		-e 's:ungif:gif:g' \
+		-e 's:$ODBCINCDIR:$ODBCINCDIR /usr/include/iodbc:' \
+		-e 's:libpq-fe.h:pg_config.h:' \
+		configure || die "adjusting configure for Gentoo failed"
+
+	# prefixify the configure script
+	sed -i \
+		-e 's:/usr:${EPREFIX}/usr:g' \
+		configure || die "prefixify configure failed"
+
+	# QTDIR only used for qt3 in gentoo, and configure looks for it.
+	unset QTDIR
+
+	# Make html docs self-consistent for offline work (based on Fedora spec)
+	if use htmldoc; then
+		epatch "${FILESDIR}"/${PN}-${PATCH_PV2}-htmldoc.patch
+		# make images local
+		sed 's!http://root.cern.ch/drupal/sites/all/themes/newsflash/images/blue/!!' \
+			-i etc/html/ROOT.css || die "htmldoc sed failed"
+		sed 's!http://root.cern.ch/drupal/sites/all/themes/newsflash/images/!!' \
+			-i etc/html/ROOT.css || die "htmldoc sed failed"
+		sed 's!http://root.cern.ch/drupal/sites/default/files/!!' \
+			-i etc/html/header.html || die "htmldoc sed failed"
+
+		cp "${DISTDIR}"/{rootdrawing-logo.png,root-banner.png,info.png} etc/html ||
+			die "htmldoc preparation failed"
+	fi
+}
+
+src_configure() {
+	# the configure script is not the standard autotools
+	./configure \
+		--prefix="${EPREFIX}"/usr \
+		--etcdir="${EPREFIX}"/etc/root \
+		--libdir="${EPREFIX}"/usr/$(get_libdir)/${PN} \
+		--docdir="${EPREFIX}"/usr/share/doc/${PF} \
+		--tutdir="${EPREFIX}"/usr/share/doc/${PF}/examples/tutorials \
+		--testdir="${EPREFIX}"/usr/share/doc/${PF}/examples/tests \
+		--with-cc=$(tc-getCC) \
+		--with-cxx=$(tc-getCXX) \
+		--with-f77=$(tc-getFC) \
+		--with-ld=$(tc-getCXX) \
+		--with-afs-shared=yes \
+		--with-sys-iconpath="${EPREFIX}"/usr/share/pixmaps \
+		--disable-builtin-afterimage \
+		--disable-builtin-freetype \
+		--disable-builtin-ftgl \
+		--disable-builtin-glew \
+		--disable-builtin-pcre \
+		--disable-builtin-zlib \
+		--disable-builtin-lzma \
+		--disable-cling \
+		--enable-astiff \
+		--enable-exceptions	\
+		--enable-explicitlink \
+		--enable-gdml \
+		--enable-memstat \
+		--enable-shadowpw \
+		--enable-shared	\
+		--enable-soversion \
+		--enable-table \
+		--fail-on-missing \
+		$(use_enable X x11) \
+		$(use_enable X asimage) \
+		$(use_enable afs) \
+		$(use_enable avahi bonjour) \
+		$(use_enable clarens) \
+		$(use_enable clarens peac) \
+		$(use_enable fits fitsio) \
+		$(use_enable fftw fftw3) \
+		$(use_enable graphviz gviz) \
+		$(use_enable kerberos krb5) \
+		$(use_enable ldap) \
+		$(use_enable math gsl-shared) \
+		$(use_enable math genvector) \
+		$(use_enable math mathmore) \
+		$(use_enable math minuit2) \
+		$(use_enable math roofit) \
+		$(use_enable math tmva) \
+		$(use_enable math unuran) \
+		$(use_enable mysql) \
+		$(use_enable odbc) \
+		$(use_enable opengl) \
+		$(use_enable postgres pgsql) \
+		$(use_enable prefix rpath) \
+		$(use_enable pythia6) \
+		$(use_enable pythia8) \
+		$(use_enable python) \
+		$(use_enable qt4 qt) \
+		$(use_enable qt4 qtgsi) \
+		$(use_enable reflex cintex) \
+		$(use_enable reflex) \
+		$(use_enable ruby) \
+		$(use_enable ssl) \
+		$(use_enable xft) \
+		$(use_enable xml) \
+		$(use_enable xrootd) \
+		${EXTRA_ECONF} \
+		|| die "configure failed"
+}
+
+src_compile() {
+	emake OPT="${CXXFLAGS}" F77OPT="${FFLAGS}"
+	if use emacs; then
+		elisp-compile build/misc/*.el || die "elisp-compile failed"
+	fi
+}
+
+doc_install() {
+	cd "${S}"
+	if use doc; then
+		einfo "Installing user's guides"
+		dodoc "${DISTDIR}"/ROOTUsersGuide.pdf
+		use math && dodoc \
+			"${DISTDIR}"/RooFit_Users_Manual_${ROOFIT_DOC_PV}.pdf \
+			"${DISTDIR}"/TMVAUsersGuide-v${TMVA_DOC_PV}.pdf
+	fi
+
+	if use examples; then
+		# these should really be taken care of by the root make install
+		insinto /usr/share/doc/${PF}/examples/tutorials/tmva
+		doins -r tmva/test
+	else
+		rm -rf "${ED}"/usr/share/doc/${PF}/examples || die
+	fi
+}
+
+daemon_install() {
+	cd "${S}"
+	local daemons="rootd proofd"
+	dodir /var/spool/rootd
+	fowners rootd:rootd /var/spool/rootd
+	dodir /var/spool/rootd/{pub,tmp}
+	fperms 1777 /var/spool/rootd/{pub,tmp}
+
+	for i in ${daemons}; do
+		newinitd "${FILESDIR}"/${i}.initd ${i}
+		newconfd "${FILESDIR}"/${i}.confd ${i}
+	done
+	if use xinetd; then
+		insinto /etc/xinetd
+		doins etc/daemons/{rootd,proofd}.xinetd
+	fi
+}
+
+desktop_install() {
+	cd "${S}"
+	sed -e 's,@prefix@,/usr,' \
+		build/package/debian/root-system-bin.desktop.in > root.desktop
+	domenu root.desktop
+	doicon "${S}"/build/package/debian/root-system-bin.png
+
+	insinto /usr/share/icons/hicolor/48x48/mimetypes
+	doins build/package/debian/application-x-root.png
+
+	insinto /usr/share/icons/hicolor/48x48/apps
+	doicon build/package/debian/root-system-bin.xpm
+}
+
+src_install() {
+	emake DESTDIR="${D}" install
+
+	echo "LDPATH=${EPREFIX}/usr/$(get_libdir)/root" > 99root
+	use pythia8 && echo "PYTHIA8=${EPREFIX}/usr" >> 99root
+	use python && echo "PYTHONPATH=${EPREFIX}/usr/$(get_libdir)/root" >> 99root
+	use ruby && echo "RUBYLIB=${EPREFIX}/usr/$(get_libdir)/root" >> 99root
+	doenvd 99root
+
+	# The build system installs Emacs support unconditionally and in the wrong
+	# directory. Remove it and call elisp-install in case of USE=emacs.
+	rm -rf "${ED}"/usr/share/emacs
+	if use emacs; then
+		elisp-install ${PN} build/misc/*.{el,elc} || die "elisp-install failed"
+	fi
+
+	doc_install
+	daemon_install
+	desktop_install
+
+	# Cleanup of files either already distributed or unused on Gentoo
+	rm "${ED}"usr/share/doc/${PF}/{INSTALL,LICENSE,COPYING.CINT} || die
+	rm "${ED}"usr/share/root/fonts/LICENSE || die
+	pushd "${ED}"usr/$(get_libdir)/root/cint/cint/lib > /dev/null
+	rm -f posix/mktypes dll_stl/setup \
+		G__* dll_stl/G__* dll_stl/rootcint_* posix/exten.o || die
+	rm -f "${ED}"usr/$(get_libdir)/root/cint/cint/include/makehpib || die
+	rm -f "${ED}"/etc/root/proof/*.sample || die
+	rm -rf "${ED}"/etc/root/daemons || die
+	popd > /dev/null
+	# these should be in PATH
+	mv "${ED}"etc/root/proof/utils/pq2/pq2* \
+		"${ED}"usr/bin/ || die
+}
+
+pkg_postinst() {
+	fdo-mime_desktop_database_update
+	use python && python_mod_optimize /usr/$(get_libdir)/root
+}
+
+pkg_postrm() {
+	fdo-mime_desktop_database_update
+	use python && python_mod_cleanup /usr/$(get_libdir)/root
+}
diff --git a/sci-physics/root/root-5.34.02.ebuild b/sci-physics/root/root-5.34.02.ebuild
new file mode 100644
index 000000000..9f28943ce
--- /dev/null
+++ b/sci-physics/root/root-5.34.02.ebuild
@@ -0,0 +1,379 @@
+# Copyright 1999-2012 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: /var/cvsroot/gentoo-x86/sci-physics/root/root-5.34.01.ebuild,v 1.2 2012/10/16 18:50:45 jlec Exp $
+
+EAPI=4
+
+PYTHON_DEPEND="python? 2"
+
+if [[ ${PV} == "9999" ]] ; then
+	_SVN=subversion
+	ESVN_REPO_URI="http://root.cern.ch/svn/root/trunk"
+	SRC_URI=""
+	KEYWORDS=""
+else
+	SRC_URI="ftp://root.cern.ch/${PN}/${PN}_v${PV}.source.tar.gz"
+	KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
+fi
+
+inherit elisp-common eutils fdo-mime fortran-2 multilib python toolchain-funcs user ${_SVN} versionator
+
+ROOFIT_DOC_PV=2.91-33
+TMVA_DOC_PV=4.03
+PATCH_PV=5.28.00b
+PATCH_PV2=5.32.00
+PATCH_PV3=5.34.01
+
+DESCRIPTION="C++ data analysis framework and interpreter from CERN"
+HOMEPAGE="http://root.cern.ch/"
+SRC_URI="${SRC_URI}
+	doc? ( ftp://root.cern.ch/${PN}/doc/ROOTUsersGuide.pdf -> ROOTUsersGuide-${PV}.pdf
+		math? (
+			ftp://root.cern.ch/${PN}/doc/RooFit_Users_Manual_${ROOFIT_DOC_PV}.pdf
+			http://tmva.sourceforge.net/docu/TMVAUsersGuide.pdf -> TMVAUsersGuide-v${TMVA_DOC_PV}.pdf )
+		htmldoc? (
+			http://root.cern.ch/drupal/sites/default/files/rootdrawing-logo.png
+			http://root.cern.ch/drupal/sites/all/themes/newsflash/images/blue/root-banner.png
+			http://root.cern.ch/drupal/sites/all/themes/newsflash/images/info.png ) )"
+
+SLOT="0"
+LICENSE="LGPL-2.1"
+IUSE="+X afs avahi -c++0x doc emacs examples fits fftw graphviz htmldoc
+	kerberos ldap +math mpi mysql odbc +opengl openmp oracle postgres prefix
+	pythia6 pythia8 python qt4 +reflex ruby ssl xinetd xml xrootd"
+
+CDEPEND="
+	app-arch/xz-utils
+	>=dev-lang/cfortran-4.4-r2
+	dev-libs/libpcre
+	media-fonts/dejavu
+	media-libs/freetype
+	media-libs/giflib
+	media-libs/libpng:0
+	media-libs/tiff:0
+	sys-libs/zlib
+	virtual/jpeg
+	virtual/shadow
+	X? (
+		media-libs/ftgl
+		media-libs/glew
+		x11-libs/libX11
+		x11-libs/libXext
+		x11-libs/libXpm
+		|| (
+			>=media-libs/libafterimage-1.20[gif,jpeg,png,tiff]
+			>=x11-wm/afterstep-2.2.11[gif,jpeg,png,tiff]
+		)
+		opengl? ( virtual/opengl virtual/glu x11-libs/gl2ps )
+		qt4? (
+			x11-libs/qt-gui:4
+			x11-libs/qt-opengl:4
+			x11-libs/qt-qt3support:4
+			x11-libs/qt-svg:4
+			x11-libs/qt-webkit:4
+			x11-libs/qt-xmlpatterns:4 )
+			x11-libs/libXft
+		)
+	afs? ( net-fs/openafs )
+	avahi? ( net-dns/avahi )
+	emacs? ( virtual/emacs )
+	fits? ( sci-libs/cfitsio )
+	fftw? ( sci-libs/fftw:3.0 )
+	graphviz? ( media-gfx/graphviz )
+	kerberos? ( virtual/krb5 )
+	ldap? ( net-nds/openldap )
+	math? ( sci-libs/gsl sci-mathematics/unuran mpi? ( virtual/mpi ) )
+	mysql? ( virtual/mysql )
+	odbc? ( || ( dev-db/libiodbc dev-db/unixODBC ) )
+	oracle? ( dev-db/oracle-instantclient-basic )
+	postgres? ( dev-db/postgresql-base )
+	pythia6? ( sci-physics/pythia:6 )
+	pythia8? ( sci-physics/pythia:8 )
+	ruby? (
+			dev-lang/ruby
+			dev-ruby/rubygems )
+	ssl? ( dev-libs/openssl )
+	xml? ( dev-libs/libxml2 )
+	xrootd? ( >=net-libs/xrootd-3.2.0 )"
+
+DEPEND="${CDEPEND}
+	virtual/pkgconfig"
+
+RDEPEND="${CDEPEND}
+	reflex? ( dev-cpp/gccxml )
+	xinetd? ( sys-apps/xinetd )"
+
+PDEPEND="htmldoc? ( ~app-doc/root-docs-${PV} )"
+
+REQUIRED_USE="
+	!X? ( !opengl !qt4 )
+	mpi? ( math !openmp )
+	openmp? ( math !mpi )"
+
+S="${WORKDIR}/${PN}"
+
+pkg_setup() {
+	fortran-2_pkg_setup
+	python_set_active_version 2
+	python_pkg_setup
+	echo
+	elog "There are extra options on packages not yet in Gentoo:"
+	elog "AliEn, castor, Chirp, dCache, gfal, gLite, Globus,"
+	elog "HDFS, Monalisa, MaxDB/SapDB, SRP."
+	elog "You can use the env variable EXTRA_ECONF variable for this."
+	elog "For example, for SRP, you would set: "
+	elog "EXTRA_ECONF=\"--enable-srp --with-srp-libdir=/usr/$(get_libdir)\""
+	echo
+	enewgroup rootd
+	enewuser rootd -1 -1 /var/spool/rootd rootd
+
+	if use math; then
+		if use openmp; then
+			if [[ $(tc-getCXX)$ == *g++* ]] && ! tc-has-openmp; then
+				ewarn "You are using a g++ without OpenMP capabilities"
+				die "Need an OpenMP capable compiler"
+			else
+				export USE_OPENMP=1 USE_PARALLEL_MINUIT2=1
+			fi
+		elif use mpi; then
+			export USE_MPI=1 USE_PARALLEL_MINUIT2=1
+		fi
+	fi
+	if use c++0x && [[ $(tc-getCXX) == *g++* ]] && \
+		! version_is_at_least "4.7" "$(gcc-version)"; then
+		eerror "You are using a g++ without C++0x capabilities"
+		die "Need an C++0x capable compiler"
+	fi
+}
+
+src_prepare() {
+	epatch \
+		"${FILESDIR}"/${PN}-${PATCH_PV}-prop-ldflags.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV2}-nobyte-compile.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV}-glibc212.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV}-unuran.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV2}-afs.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV2}-cfitsio.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV2}-chklib64.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV2}-dotfont.patch \
+		"${FILESDIR}"/${PN}-${PATCH_PV3}-glibc216.patch
+
+	# make sure we use system libs and headers
+	rm montecarlo/eg/inc/cfortran.h README/cfortran.doc || die
+	rm -r graf2d/asimage/src/libAfterImage || die
+	rm -r graf3d/ftgl/{inc,src} || die
+	rm -r graf2d/freetype/src || die
+	rm -r graf3d/glew/{inc,src} || die
+	rm -r core/pcre/src || die
+	rm -r math/unuran/src/unuran-*.tar.gz || die
+	LANG=C LC_ALL=C find core/zip -type f -name "[a-z]*" -print0 | xargs -0 rm -f || die
+	rm -r core/lzma/src/*.tar.gz || die
+	rm graf3d/gl/{inc,src}/gl2ps.* || die
+	sed -i -e 's/^GLLIBS *:= .* $(OPENGLLIB)/& -lgl2ps/' graf3d/gl/Module.mk || die
+
+	# In Gentoo, libPythia6 is called libpythia6
+	# libungif is called libgif,
+	# iodbc is in /usr/include/iodbc
+	# pg_config.h is checked instead of libpq-fe.h
+	sed -i \
+		-e 's:libPythia6:libpythia6:g' \
+		-e 's:ungif:gif:g' \
+		-e 's:$ODBCINCDIR:$ODBCINCDIR /usr/include/iodbc:' \
+		-e 's:libpq-fe.h:pg_config.h:' \
+		configure || die "adjusting configure for Gentoo failed"
+
+	# prefixify the configure script
+	sed -i \
+		-e 's:/usr:${EPREFIX}/usr:g' \
+		configure || die "prefixify configure failed"
+
+	# QTDIR only used for qt3 in gentoo, and configure looks for it.
+	unset QTDIR
+
+	# Make html docs self-consistent for offline work (based on Fedora spec)
+	if use htmldoc; then
+		epatch "${FILESDIR}"/${PN}-${PATCH_PV2}-htmldoc.patch
+		# make images local
+		sed 's!http://root.cern.ch/drupal/sites/all/themes/newsflash/images/blue/!!' \
+			-i etc/html/ROOT.css || die "htmldoc sed failed"
+		sed 's!http://root.cern.ch/drupal/sites/all/themes/newsflash/images/!!' \
+			-i etc/html/ROOT.css || die "htmldoc sed failed"
+		sed 's!http://root.cern.ch/drupal/sites/default/files/!!' \
+			-i etc/html/header.html || die "htmldoc sed failed"
+
+		cp "${DISTDIR}"/{rootdrawing-logo.png,root-banner.png,info.png} etc/html ||
+			die "htmldoc preparation failed"
+	fi
+}
+
+src_configure() {
+	# the configure script is not the standard autotools
+	./configure \
+		--prefix="${EPREFIX}"/usr \
+		--etcdir="${EPREFIX}"/etc/root \
+		--libdir="${EPREFIX}"/usr/$(get_libdir)/${PN} \
+		--docdir="${EPREFIX}"/usr/share/doc/${PF} \
+		--tutdir="${EPREFIX}"/usr/share/doc/${PF}/examples/tutorials \
+		--testdir="${EPREFIX}"/usr/share/doc/${PF}/examples/tests \
+		--with-cc=$(tc-getCC) \
+		--with-cxx=$(tc-getCXX) \
+		--with-f77=$(tc-getFC) \
+		--with-ld=$(tc-getCXX) \
+		--with-afs-shared=yes \
+		--with-sys-iconpath="${EPREFIX}"/usr/share/pixmaps \
+		--disable-builtin-afterimage \
+		--disable-builtin-freetype \
+		--disable-builtin-ftgl \
+		--disable-builtin-glew \
+		--disable-builtin-pcre \
+		--disable-builtin-zlib \
+		--disable-builtin-lzma \
+		--disable-cling \
+		--enable-astiff \
+		--enable-explicitlink \
+		--enable-gdml \
+		--enable-memstat \
+		--enable-shadowpw \
+		--enable-shared	\
+		--enable-soversion \
+		--enable-table \
+		--fail-on-missing \
+		$(use_enable X x11) \
+		$(use_enable X asimage) \
+		$(use_enable X xft) \
+		$(use_enable afs) \
+		$(use_enable avahi bonjour) \
+		$(use_enable fits fitsio) \
+		$(use_enable fftw fftw3) \
+		$(use_enable graphviz gviz) \
+		$(use_enable kerberos krb5) \
+		$(use_enable ldap) \
+		$(use_enable math gsl-shared) \
+		$(use_enable math genvector) \
+		$(use_enable math mathmore) \
+		$(use_enable math minuit2) \
+		$(use_enable math roofit) \
+		$(use_enable math tmva) \
+		$(use_enable math unuran) \
+		$(use_enable mysql) \
+		$(use_enable odbc) \
+		$(use_enable opengl) \
+		$(use_enable postgres pgsql) \
+		$(use_enable prefix rpath) \
+		$(use_enable pythia6) \
+		$(use_enable pythia8) \
+		$(use_enable python) \
+		$(use_enable qt4 qt) \
+		$(use_enable qt4 qtgsi) \
+		$(use_enable reflex cintex) \
+		$(use_enable reflex) \
+		$(use_enable ruby) \
+		$(use_enable ssl) \
+		$(use_enable xml) \
+		$(use_enable xrootd) \
+		${EXTRA_ECONF} \
+		|| die "configure failed"
+}
+
+src_compile() {
+	emake OPT="${CXXFLAGS}" F77OPT="${FFLAGS}" ROOTSYS="${S}" LD_LIBRARY_PATH="${S}/lib"
+	if use emacs; then
+		elisp-compile build/misc/*.el || die "elisp-compile failed"
+	fi
+}
+
+doc_install() {
+	cd "${S}"
+	if use doc; then
+		einfo "Installing user's guides"
+		dodoc "${DISTDIR}"/ROOTUsersGuide-${PV}.pdf
+		use math && dodoc \
+			"${DISTDIR}"/RooFit_Users_Manual_${ROOFIT_DOC_PV}.pdf \
+			"${DISTDIR}"/TMVAUsersGuide-v${TMVA_DOC_PV}.pdf
+	fi
+
+	if use examples; then
+		# these should really be taken care of by the root make install
+		insinto /usr/share/doc/${PF}/examples/tutorials/tmva
+		doins -r tmva/test
+	else
+		rm -r "${ED}"/usr/share/doc/${PF}/examples || die
+	fi
+}
+
+daemon_install() {
+	cd "${S}"
+	local daemons="rootd proofd"
+	dodir /var/spool/rootd
+	fowners rootd:rootd /var/spool/rootd
+	dodir /var/spool/rootd/{pub,tmp}
+	fperms 1777 /var/spool/rootd/{pub,tmp}
+
+	for i in ${daemons}; do
+		newinitd "${FILESDIR}"/${i}.initd ${i}
+		newconfd "${FILESDIR}"/${i}.confd ${i}
+	done
+	if use xinetd; then
+		insinto /etc/xinetd
+		doins etc/daemons/{rootd,proofd}.xinetd
+	fi
+}
+
+desktop_install() {
+	cd "${S}"
+	sed -e 's,@prefix@,/usr,' \
+		build/package/debian/root-system-bin.desktop.in > root.desktop
+	domenu root.desktop
+	doicon "${S}"/build/package/debian/root-system-bin.png
+
+	insinto /usr/share/icons/hicolor/48x48/mimetypes
+	doins build/package/debian/application-x-root.png
+
+	insinto /usr/share/icons/hicolor/48x48/apps
+	doicon build/package/debian/root-system-bin.xpm
+}
+
+src_install() {
+	emake DESTDIR="${D}" install
+
+	echo "LDPATH=${EPREFIX}/usr/$(get_libdir)/root" > 99root
+	use pythia8 && echo "PYTHIA8=${EPREFIX}/usr" >> 99root
+	use python && echo "PYTHONPATH=${EPREFIX}/usr/$(get_libdir)/root" >> 99root
+	use ruby && echo "RUBYLIB=${EPREFIX}/usr/$(get_libdir)/root" >> 99root
+	doenvd 99root
+
+	# The build system installs Emacs support unconditionally and in the wrong
+	# directory. Remove it and call elisp-install in case of USE=emacs.
+	rm -r "${ED}"/usr/share/emacs
+	if use emacs; then
+		elisp-install ${PN} build/misc/*.{el,elc} || die "elisp-install failed"
+	fi
+
+	doc_install
+	daemon_install
+	desktop_install
+
+	# Cleanup of files either already distributed or unused on Gentoo
+	rm "${ED}"usr/share/doc/${PF}/{INSTALL,LICENSE,COPYING.CINT} || die
+	rm "${ED}"usr/share/root/fonts/LICENSE || die
+	pushd "${ED}"usr/$(get_libdir)/root/cint/cint/lib > /dev/null
+	rm posix/mktypes dll_stl/setup \
+		G__* dll_stl/G__* dll_stl/rootcint_* posix/exten.o || die
+	rm "${ED}"usr/$(get_libdir)/root/cint/cint/include/makehpib || die
+	rm "${ED}"/etc/root/proof/*.sample || die
+	rm -r "${ED}"/etc/root/daemons || die
+	popd > /dev/null
+	# these should be in PATH
+	mv "${ED}"etc/root/proof/utils/pq2/pq2* \
+		"${ED}"usr/bin/ || die
+}
+
+pkg_postinst() {
+	fdo-mime_desktop_database_update
+	use python && python_mod_optimize /usr/$(get_libdir)/root
+}
+
+pkg_postrm() {
+	fdo-mime_desktop_database_update
+	use python && python_mod_cleanup /usr/$(get_libdir)/root
+}