diff options
31 files changed, 38 insertions, 38 deletions
diff --git a/sci-biology/KaKs_Calculator/KaKs_Calculator-1.2.ebuild b/sci-biology/KaKs_Calculator/KaKs_Calculator-1.2.ebuild index 39e10af29..df99ed3b2 100644 --- a/sci-biology/KaKs_Calculator/KaKs_Calculator-1.2.ebuild +++ b/sci-biology/KaKs_Calculator/KaKs_Calculator-1.2.ebuild @@ -29,7 +29,7 @@ src_prepare(){ src_compile(){ cd src || die - emake + default } src_install(){ diff --git a/sci-biology/MaSuRCA/MaSuRCA-2.3.2b.ebuild b/sci-biology/MaSuRCA/MaSuRCA-2.3.2b.ebuild index 47849a1c3..def9b355a 100644 --- a/sci-biology/MaSuRCA/MaSuRCA-2.3.2b.ebuild +++ b/sci-biology/MaSuRCA/MaSuRCA-2.3.2b.ebuild @@ -37,19 +37,19 @@ src_configure(){ src_compile(){ cd jellyfish || die - emake + default cd ../CA/kmer || die - emake + default cd ../../CA/src || die - emake + default cd ../SuperReads || die - emake + default cd ../quorum || die - emake + default } src_install(){ diff --git a/sci-biology/clview/clview-0.1.ebuild b/sci-biology/clview/clview-0.1.ebuild index c8f81244c..1e897bf2d 100644 --- a/sci-biology/clview/clview-0.1.ebuild +++ b/sci-biology/clview/clview-0.1.ebuild @@ -100,7 +100,7 @@ src_prepare() { src_compile(){ cd "${S}"/clview || die - emake + default } src_install() { diff --git a/sci-biology/consed/consed-29.ebuild b/sci-biology/consed/consed-29.ebuild index 2ca1dde86..b814b4689 100644 --- a/sci-biology/consed/consed-29.ebuild +++ b/sci-biology/consed/consed-29.ebuild @@ -54,7 +54,7 @@ src_prepare() { src_compile() { einfo "consed does not compile with sys-devel/gcc-4.6:* or newer (but 4.4.7 works)" - emake + default emake -C misc/mktrace emake -C misc/phd2fasta (cd misc/454; $(tc-getCC) ${CFLAGS} ${LDFLAGS} sff2scf.c -o sff2scf) || die diff --git a/sci-biology/edena/edena-3.131028.ebuild b/sci-biology/edena/edena-3.131028.ebuild index 073297787..408b8757a 100644 --- a/sci-biology/edena/edena-3.131028.ebuild +++ b/sci-biology/edena/edena-3.131028.ebuild @@ -26,7 +26,7 @@ src_prepare(){ src_compile(){ cd src - emake + default } src_install(){ diff --git a/sci-biology/manatee-igs/manatee-igs-2.23.1.ebuild b/sci-biology/manatee-igs/manatee-igs-2.23.1.ebuild index 216bdcb25..b30b96691 100644 --- a/sci-biology/manatee-igs/manatee-igs-2.23.1.ebuild +++ b/sci-biology/manatee-igs/manatee-igs-2.23.1.ebuild @@ -61,7 +61,7 @@ src_prepare(){ #} # #src_compile(){ -# emake +# default #} src_install(){ diff --git a/sci-biology/manatee-jcvi/manatee-jcvi-2.4.3.ebuild b/sci-biology/manatee-jcvi/manatee-jcvi-2.4.3.ebuild index 8750d1926..a37262174 100644 --- a/sci-biology/manatee-jcvi/manatee-jcvi-2.4.3.ebuild +++ b/sci-biology/manatee-jcvi/manatee-jcvi-2.4.3.ebuild @@ -49,5 +49,5 @@ src_configure(){ } src_compile(){ - emake + default } diff --git a/sci-biology/mgblast/mgblast-0.1.ebuild b/sci-biology/mgblast/mgblast-0.1.ebuild index ff0693ffa..0a95c2e09 100644 --- a/sci-biology/mgblast/mgblast-0.1.ebuild +++ b/sci-biology/mgblast/mgblast-0.1.ebuild @@ -37,7 +37,7 @@ src_prepare(){ src_compile(){ cd "${S}"/mgblast || die - emake + default } src_install(){ diff --git a/sci-biology/minced/minced-9999.ebuild b/sci-biology/minced/minced-9999.ebuild index 8d629e18e..e4aa81fdc 100644 --- a/sci-biology/minced/minced-9999.ebuild +++ b/sci-biology/minced/minced-9999.ebuild @@ -19,7 +19,7 @@ DEPEND=">=virtual/jdk-1.7" RDEPEND=">=virtual/jre-1.7" src_compile(){ - emake + default } src_install(){ diff --git a/sci-biology/pileup/pileup-0.6.ebuild b/sci-biology/pileup/pileup-0.6.ebuild index 064c48cd1..aaa8a56b5 100644 --- a/sci-biology/pileup/pileup-0.6.ebuild +++ b/sci-biology/pileup/pileup-0.6.ebuild @@ -37,12 +37,12 @@ src_prepare(){ src_compile(){ cd ssaha_pileup/ssaha_pileup || die "Cannot cd to "${S}"ssaha_pileup/ssaha_pileup" - emake + default for d in get_seqreads ssaha_split ssaha_parseSNP search_read; do cd "${S}"/ssaha_pileup/other_codes/$d || die "Cannot cd to "${S}"ssaha_pileup/other_codes/"$d make clean - emake + default done } diff --git a/sci-biology/pvmsx/pvmsx-0.1.ebuild b/sci-biology/pvmsx/pvmsx-0.1.ebuild index f018aef1d..57e3b945e 100644 --- a/sci-biology/pvmsx/pvmsx-0.1.ebuild +++ b/sci-biology/pvmsx/pvmsx-0.1.ebuild @@ -35,7 +35,7 @@ src_prepare() { } src_compile() { - emake + default } src_install() { diff --git a/sci-biology/samstat/samstat-20130708.ebuild b/sci-biology/samstat/samstat-20130708.ebuild index 217230893..61c41352b 100644 --- a/sci-biology/samstat/samstat-20130708.ebuild +++ b/sci-biology/samstat/samstat-20130708.ebuild @@ -21,7 +21,7 @@ RDEPEND="${DEPEND}" S="${WORKDIR}"/"${PN}"/src src_compile(){ - emake + default } src_install(){ diff --git a/sci-biology/sga/sga-9999.ebuild b/sci-biology/sga/sga-9999.ebuild index 047ee2158..a2d4897ee 100644 --- a/sci-biology/sga/sga-9999.ebuild +++ b/sci-biology/sga/sga-9999.ebuild @@ -31,7 +31,7 @@ src_configure(){ src_compile(){ cd src || die - emake + default } src_install(){ diff --git a/sci-biology/sra_sdk/sra_sdk-2.2.2a.ebuild b/sci-biology/sra_sdk/sra_sdk-2.2.2a.ebuild index 3605a6630..b29b5d8c8 100644 --- a/sci-biology/sra_sdk/sra_sdk-2.2.2a.ebuild +++ b/sci-biology/sra_sdk/sra_sdk-2.2.2a.ebuild @@ -55,7 +55,7 @@ src_compile(){ emake OUTDIR="${WORKDIR}"/objdir out emake dynamic emake release - emake + default } src_install(){ diff --git a/sci-chemistry/NMRdyn/NMRdyn-3.2.5.ebuild b/sci-chemistry/NMRdyn/NMRdyn-3.2.5.ebuild index 8b6445f4d..bac742185 100644 --- a/sci-chemistry/NMRdyn/NMRdyn-3.2.5.ebuild +++ b/sci-chemistry/NMRdyn/NMRdyn-3.2.5.ebuild @@ -68,7 +68,7 @@ src_compile() { if use qt4; then cd src/NMRdynGUI || die - emake + default fi } diff --git a/sci-chemistry/drawxtl/drawxtl-45.ebuild b/sci-chemistry/drawxtl/drawxtl-45.ebuild index 873394dfe..258522239 100644 --- a/sci-chemistry/drawxtl/drawxtl-45.ebuild +++ b/sci-chemistry/drawxtl/drawxtl-45.ebuild @@ -44,11 +44,11 @@ src_compile() { mkdir exe || die "mkdir failed" cd source/${MY_P} || die emake clean - emake + default if use fltk; then cd "${S}"/source/DRAWshell${PV} || die - emake + default fi } diff --git a/sci-chemistry/jligand/jligand-1.0.40.ebuild b/sci-chemistry/jligand/jligand-1.0.40.ebuild index 655ca7501..5d25e5bce 100644 --- a/sci-chemistry/jligand/jligand-1.0.40.ebuild +++ b/sci-chemistry/jligand/jligand-1.0.40.ebuild @@ -24,7 +24,7 @@ S="${WORKDIR}"/${MY_PN}.${PV} src_compile() { sed 's:makefile::g' -i Makefile || die - emake + default } src_install() { diff --git a/sci-libs/cblas-reference/cblas-reference-20110218-r1.ebuild b/sci-libs/cblas-reference/cblas-reference-20110218-r1.ebuild index ad42bf234..9e7e1f391 100644 --- a/sci-libs/cblas-reference/cblas-reference-20110218-r1.ebuild +++ b/sci-libs/cblas-reference/cblas-reference-20110218-r1.ebuild @@ -106,7 +106,7 @@ src_test() { local profname=$(fortran-int64_get_profname) local libname="${profname//-/_}" cd testing || die - emake + default emake run } multibuild_foreach_variant run_in_build_dir fortran-int64_multilib_multibuild_wrapper my_src_test diff --git a/sci-libs/cblas-reference/cblas-reference-20110218.ebuild b/sci-libs/cblas-reference/cblas-reference-20110218.ebuild index bd1ea4ae6..c2c9b6f1f 100644 --- a/sci-libs/cblas-reference/cblas-reference-20110218.ebuild +++ b/sci-libs/cblas-reference/cblas-reference-20110218.ebuild @@ -81,7 +81,7 @@ src_compile() { src_test() { cd testing || die - emake + default emake run } diff --git a/sci-libs/openlibm/openlibm-9999.ebuild b/sci-libs/openlibm/openlibm-9999.ebuild index 864627b80..a088a7f69 100644 --- a/sci-libs/openlibm/openlibm-9999.ebuild +++ b/sci-libs/openlibm/openlibm-9999.ebuild @@ -28,7 +28,7 @@ src_compile() { } src_test() { - emake + default } src_install() { diff --git a/sci-libs/spglib/spglib-1.6.0.ebuild b/sci-libs/spglib/spglib-1.6.0.ebuild index 554e3942a..e21553a46 100644 --- a/sci-libs/spglib/spglib-1.6.0.ebuild +++ b/sci-libs/spglib/spglib-1.6.0.ebuild @@ -30,5 +30,5 @@ src_configure() { } src_compile() { - emake + default } diff --git a/sci-mathematics/cadabra/cadabra-1.39.ebuild b/sci-mathematics/cadabra/cadabra-1.39.ebuild index ce3603b33..0e19badf1 100644 --- a/sci-mathematics/cadabra/cadabra-1.39.ebuild +++ b/sci-mathematics/cadabra/cadabra-1.39.ebuild @@ -51,7 +51,7 @@ src_compile() { if use doc; then cd "${S}/doc" || die - emake + default cd doxygen/latex || die emake pdf fi diff --git a/sci-mathematics/htk/htk-3.4.1.ebuild b/sci-mathematics/htk/htk-3.4.1.ebuild index a073e0a6c..650f0ce14 100644 --- a/sci-mathematics/htk/htk-3.4.1.ebuild +++ b/sci-mathematics/htk/htk-3.4.1.ebuild @@ -51,6 +51,6 @@ src_compile() { if use hlmtools || use hdecode; then emake -j1 else - emake + default fi } diff --git a/sci-mathematics/ltl2ba/ltl2ba-1.1.ebuild b/sci-mathematics/ltl2ba/ltl2ba-1.1.ebuild index 38b4c3153..edbb9a990 100644 --- a/sci-mathematics/ltl2ba/ltl2ba-1.1.ebuild +++ b/sci-mathematics/ltl2ba/ltl2ba-1.1.ebuild @@ -21,7 +21,7 @@ src_compile() { -e "s/CC=gcc/#CC=gcc/g" \ -e "s/CFLAGS= -O3 -ansi -DNXT/CFLAGS+= -ansi -DNXT/g" - emake + default } src_install() { diff --git a/sci-mathematics/pff/pff-8.4.ebuild b/sci-mathematics/pff/pff-8.4.ebuild index 2c221adfd..d6c235a42 100644 --- a/sci-mathematics/pff/pff-8.4.ebuild +++ b/sci-mathematics/pff/pff-8.4.ebuild @@ -25,7 +25,7 @@ src_prepare() { } src_compile(){ - emake + default } src_install(){ diff --git a/sci-mathematics/scilab/scilab-5.5.2-r1.ebuild b/sci-mathematics/scilab/scilab-5.5.2-r1.ebuild index 432ffdd9a..fabaeb04c 100644 --- a/sci-mathematics/scilab/scilab-5.5.2-r1.ebuild +++ b/sci-mathematics/scilab/scilab-5.5.2-r1.ebuild @@ -232,7 +232,7 @@ src_configure() { src_compile() { addpredict /proc/mtrr - emake + default pax-mark m .libs/scilab-bin use doc && emake doc } diff --git a/sci-mathematics/why3/why3-0.83.ebuild b/sci-mathematics/why3/why3-0.83.ebuild index 7ff28271f..b07bcc30e 100644 --- a/sci-mathematics/why3/why3-0.83.ebuild +++ b/sci-mathematics/why3/why3-0.83.ebuild @@ -40,7 +40,7 @@ src_configure() { src_compile() { MAKEOPTS+=" -j1" - emake + default if use doc; then emake doc/manual.pdf fi diff --git a/sci-misc/foma/foma-0.9.14_alpha.ebuild b/sci-misc/foma/foma-0.9.14_alpha.ebuild index 20ef0c666..52fca31fd 100644 --- a/sci-misc/foma/foma-0.9.14_alpha.ebuild +++ b/sci-misc/foma/foma-0.9.14_alpha.ebuild @@ -33,7 +33,7 @@ src_prepare() { } src_compile() { - emake + default emake libfoma } diff --git a/sci-misc/foma/foma-0.9.16_alpha.ebuild b/sci-misc/foma/foma-0.9.16_alpha.ebuild index 0607dc094..37700c369 100644 --- a/sci-misc/foma/foma-0.9.16_alpha.ebuild +++ b/sci-misc/foma/foma-0.9.16_alpha.ebuild @@ -33,7 +33,7 @@ src_prepare() { } src_compile() { - emake + default emake libfoma } diff --git a/sci-misc/kaldi/kaldi-0_p20150709.ebuild b/sci-misc/kaldi/kaldi-0_p20150709.ebuild index 0ce2b8a8d..ad8c84d36 100644 --- a/sci-misc/kaldi/kaldi-0_p20150709.ebuild +++ b/sci-misc/kaldi/kaldi-0_p20150709.ebuild @@ -47,7 +47,7 @@ src_configure() { } src_compile() { - emake + default use doc && doxygen } diff --git a/sci-physics/geant-vmc/geant-vmc-4.2.15a.ebuild b/sci-physics/geant-vmc/geant-vmc-4.2.15a.ebuild index f79c02ccb..c00fbca5e 100644 --- a/sci-physics/geant-vmc/geant-vmc-4.2.15a.ebuild +++ b/sci-physics/geant-vmc/geant-vmc-4.2.15a.ebuild @@ -34,7 +34,7 @@ src_compile() { source $(ls -1 "${EROOT}"usr/share/Geant4-*/geant4make/geant4make.sh) || die for d in ${dirs}; do pushd ${d} > /dev/null || die - emake + default if use doc; then doxygen || die fi @@ -44,7 +44,7 @@ src_compile() { src_test() { cd examples || die - emake + default ./run_suite.sh || die } |