diff options
63 files changed, 64 insertions, 63 deletions
diff --git a/dev-java/flexdock/flexdock-1.1.1.ebuild b/dev-java/flexdock/flexdock-1.1.1.ebuild index f52941f30..7b1e9f0b0 100644 --- a/dev-java/flexdock/flexdock-1.1.1.ebuild +++ b/dev-java/flexdock/flexdock-1.1.1.ebuild @@ -13,7 +13,7 @@ SRC_URI="http://forge.scilab.org/index.php/p/flexdock/downloads/get/${P}-src.zip LICENSE="MIT" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="" RDEPEND=">=virtual/jre-1.4" diff --git a/dev-java/flexdock/flexdock-1.2.4.ebuild b/dev-java/flexdock/flexdock-1.2.4.ebuild index fa2b9761e..6eae0b579 100644 --- a/dev-java/flexdock/flexdock-1.2.4.ebuild +++ b/dev-java/flexdock/flexdock-1.2.4.ebuild @@ -12,7 +12,7 @@ SRC_URI="http://forge.scilab.org/index.php/p/flexdock/downloads/get/${P}.tar.gz" LICENSE="MIT" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="" diff --git a/dev-java/htsjdk/htsjdk-2.5.1.ebuild b/dev-java/htsjdk/htsjdk-2.5.1.ebuild index f279f8343..755a6fa1f 100644 --- a/dev-java/htsjdk/htsjdk-2.5.1.ebuild +++ b/dev-java/htsjdk/htsjdk-2.5.1.ebuild @@ -14,7 +14,7 @@ SRC_URI="https://github.com/samtools/htsjdk/archive/${PV}.tar.gz -> ${P}.tar.gz" LICENSE="MIT" SLOT="0" IUSE="" -KEYWORDS="" # SANDBOX VIOLATION +KEYWORDS="" CDEPEND="dev-java/commons-jexl:2 dev-java/commons-compress:0 diff --git a/dev-java/htsjdk/htsjdk-9999.ebuild b/dev-java/htsjdk/htsjdk-9999.ebuild index 1b49494d4..b4a3c1441 100644 --- a/dev-java/htsjdk/htsjdk-9999.ebuild +++ b/dev-java/htsjdk/htsjdk-9999.ebuild @@ -14,7 +14,7 @@ EGIT_REPO_URI="https://github.com/samtools/htsjdk.git" LICENSE="MIT" SLOT="0" IUSE="" -KEYWORDS="" # SANDBOX VIOLATION +KEYWORDS="" CDEPEND="dev-java/commons-jexl:2 dev-java/commons-compress:0 diff --git a/dev-java/jrosetta/jrosetta-1.0.4.ebuild b/dev-java/jrosetta/jrosetta-1.0.4.ebuild index bc631a44a..dd8a3535e 100644 --- a/dev-java/jrosetta/jrosetta-1.0.4.ebuild +++ b/dev-java/jrosetta/jrosetta-1.0.4.ebuild @@ -13,7 +13,7 @@ SRC_URI="http://pkgs.fedoraproject.org/repo/pkgs/${PN}/${P}-sources.jar/5c3589d4 LICENSE="GPL-2" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="" DEPEND=" diff --git a/dev-python/ffnet/ffnet-0.7.1.ebuild b/dev-python/ffnet/ffnet-0.7.1.ebuild index 1f5008c60..0cc21ebb0 100644 --- a/dev-python/ffnet/ffnet-0.7.1.ebuild +++ b/dev-python/ffnet/ffnet-0.7.1.ebuild @@ -13,7 +13,7 @@ SRC_URI="mirror://sourceforge/${PN}/${P}.tar.gz" SLOT="0" LICENSE="GPL-2" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="examples graphviz matplotlib" DEPEND="${PYTHON_DEPS} diff --git a/dev-python/ffnet/ffnet-0.8.3.ebuild b/dev-python/ffnet/ffnet-0.8.3.ebuild index 00b13333b..5684807e4 100644 --- a/dev-python/ffnet/ffnet-0.8.3.ebuild +++ b/dev-python/ffnet/ffnet-0.8.3.ebuild @@ -13,7 +13,7 @@ SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz" SLOT="0" LICENSE="LGPL-3" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="examples matplotlib" DEPEND="${PYTHON_DEPS} diff --git a/dev-python/ffnetui/ffnetui-0.8.3.2.ebuild b/dev-python/ffnetui/ffnetui-0.8.3.2.ebuild index 77ce6ca3e..605cafd71 100644 --- a/dev-python/ffnetui/ffnetui-0.8.3.2.ebuild +++ b/dev-python/ffnetui/ffnetui-0.8.3.2.ebuild @@ -13,7 +13,7 @@ SRC_URI="mirror://pypi/${PN:0:1}/${PN}/${P}.tar.gz" SLOT="0" LICENSE="GPL-3" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="" DEPEND="${PYTHON_DEPS} diff --git a/dev-python/python-vxi11/python-vxi11-0.8.ebuild b/dev-python/python-vxi11/python-vxi11-0.8.ebuild index ca091b03f..0c4b25d06 100644 --- a/dev-python/python-vxi11/python-vxi11-0.8.ebuild +++ b/dev-python/python-vxi11/python-vxi11-0.8.ebuild @@ -12,4 +12,4 @@ SRC_URI="https://github.com/python-ivi/${PN}/archive/v${PV}.tar.gz -> ${P}.tar.g LICENSE="MIT" SLOT="0" -KEYWORDS="~amd64"
\ No newline at end of file +KEYWORDS="~amd64" diff --git a/dev-util/f90cache/f90cache-0.99.ebuild b/dev-util/f90cache/f90cache-0.99.ebuild index fad4d4013..1bc36389a 100644 --- a/dev-util/f90cache/f90cache-0.99.ebuild +++ b/dev-util/f90cache/f90cache-0.99.ebuild @@ -11,7 +11,7 @@ SRC_URI="http://people.irisa.fr/Edouard.Canot/${PN}/${P}.tar.bz2" LICENSE="GPL-3" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="" DEPEND="" diff --git a/media-libs/avbin-bin/avbin-bin-8.1.ebuild b/media-libs/avbin-bin/avbin-bin-8.1.ebuild index 66edbc76c..13eb02661 100644 --- a/media-libs/avbin-bin/avbin-bin-8.1.ebuild +++ b/media-libs/avbin-bin/avbin-bin-8.1.ebuild @@ -11,7 +11,7 @@ SRC_URI=" LICENSE="GPL-3 LGPL-3" SLOT="0" -KEYWORDS="~amd64 ~x86 -*" +KEYWORDS="-* ~amd64 ~x86" IUSE="" pkg_setup(){ diff --git a/sci-biology/MolBioLib/MolBioLib-5.ebuild b/sci-biology/MolBioLib/MolBioLib-5.ebuild index 681758724..2775e2faf 100644 --- a/sci-biology/MolBioLib/MolBioLib-5.ebuild +++ b/sci-biology/MolBioLib/MolBioLib-5.ebuild @@ -9,7 +9,7 @@ SRC_URI="https://sourceforge.net/projects/molbiolib/files/MolBioLib_public.versi LICENSE="GPL-3" SLOT="0" -KEYWORDS="" # does not build +KEYWORDS="" IUSE="doc" # contains bundled samtools-0.1.18 and bamtools (pezmaster31-bamtools-d553a62) which contains jsoncpp diff --git a/sci-biology/bwa/bwa-0.7.17.ebuild b/sci-biology/bwa/bwa-0.7.17.ebuild index 429ba43e6..9d4e13e57 100644 --- a/sci-biology/bwa/bwa-0.7.17.ebuild +++ b/sci-biology/bwa/bwa-0.7.17.ebuild @@ -12,7 +12,7 @@ SRC_URI="mirror://sourceforge/bio-bwa/${P}.tar.bz2" LICENSE="GPL-3" SLOT="0" IUSE="" -KEYWORDS="~amd64 ~x86 ~x64-macos" +KEYWORDS="~amd64 ~x64-macos ~x86" RDEPEND="dev-lang/perl" diff --git a/sci-biology/clover/clover-2011.10.24.ebuild b/sci-biology/clover/clover-2011.10.24.ebuild index d8a1f2eb2..b8d395801 100644 --- a/sci-biology/clover/clover-2011.10.24.ebuild +++ b/sci-biology/clover/clover-2011.10.24.ebuild @@ -16,7 +16,7 @@ SRC_URI=" LICENSE="freedist" SLOT="0" IUSE="" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" S="${WORKDIR}/${PN}-${MY_PV}" diff --git a/sci-biology/estscan/estscan-3.0.3.ebuild b/sci-biology/estscan/estscan-3.0.3.ebuild index 8483670c9..e933c59b8 100644 --- a/sci-biology/estscan/estscan-3.0.3.ebuild +++ b/sci-biology/estscan/estscan-3.0.3.ebuild @@ -20,7 +20,7 @@ SRC_URI=" SLOT="0" LICENSE="estscan" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="icc ifc" DEPEND=" diff --git a/sci-biology/gatk/gatk-3.8.1.ebuild b/sci-biology/gatk/gatk-3.8.1.ebuild index f46c1d322..c5e44747a 100644 --- a/sci-biology/gatk/gatk-3.8.1.ebuild +++ b/sci-biology/gatk/gatk-3.8.1.ebuild @@ -18,7 +18,7 @@ EGIT_COMMIT="41147a655594c2aae6e2cad8462bd1648570b32b" LICENSE="MIT" SLOT="0" IUSE="" -KEYWORDS="~amd64" # 608.21 MiB git download and 134MB "${W}"/.m2 download +KEYWORDS=""${W} # 134MB 608.21 MiB and download git ~amd64"" COMMON_DEPS="" DEPEND=" diff --git a/sci-biology/gatk/gatk-9999.ebuild b/sci-biology/gatk/gatk-9999.ebuild index fc9db8986..83149fb0f 100644 --- a/sci-biology/gatk/gatk-9999.ebuild +++ b/sci-biology/gatk/gatk-9999.ebuild @@ -21,7 +21,7 @@ EGIT_CLONE_TYPE="mirror" LICENSE="BSD-3" # since gatk-4 SLOT="0" IUSE="" -KEYWORDS="" # 148.19 MB git download and 134MB "${W}"/.m2 download +KEYWORDS=""${W} # 134MB 148.19 MB and download git" COMMON_DEPS="" # gatk-4 needs java-1.8 diff --git a/sci-biology/graf-bin/graf-bin-20171212.ebuild b/sci-biology/graf-bin/graf-bin-20171212.ebuild index 93d554892..710eb5595 100644 --- a/sci-biology/graf-bin/graf-bin-20171212.ebuild +++ b/sci-biology/graf-bin/graf-bin-20171212.ebuild @@ -12,7 +12,7 @@ SRC_URI="http://www.ncbi.nlm.nih.gov/projects/gap/cgi-bin/GetZip.cgi?zip_name=GR LICENSE="public-domain" SLOT="0" -KEYWORDS="~amd64" # 64bit exe only +KEYWORDS="~amd64" IUSE="" DEPEND="" diff --git a/sci-biology/igv/igv-2.3.81.ebuild b/sci-biology/igv/igv-2.3.81.ebuild index 5fabefeb3..b870b0e98 100644 --- a/sci-biology/igv/igv-2.3.81.ebuild +++ b/sci-biology/igv/igv-2.3.81.ebuild @@ -26,7 +26,7 @@ HOMEPAGE="http://www.broadinstitute.org/igv/" LICENSE="LGPL-2.1" SLOT="0" IUSE="" -KEYWORDS="" # igv-2.3.81/src/com/iontorrent/views/FlowSignalDistributionPanel.java:222: error: cannot access PublicCloneable +KEYWORDS="" # actually more exactly the COMMON_DEPS should contain: # >=dev-java/commons-compress-1.11 # use bundled library until dev-java/commons-compress is bumped, see bug #591696 diff --git a/sci-biology/igv/igv-2.3.88.ebuild b/sci-biology/igv/igv-2.3.88.ebuild index 8011ea888..b870b0e98 100644 --- a/sci-biology/igv/igv-2.3.88.ebuild +++ b/sci-biology/igv/igv-2.3.88.ebuild @@ -26,7 +26,7 @@ HOMEPAGE="http://www.broadinstitute.org/igv/" LICENSE="LGPL-2.1" SLOT="0" IUSE="" -KEYWORDS="" # see upstream issue #332 +KEYWORDS="" # actually more exactly the COMMON_DEPS should contain: # >=dev-java/commons-compress-1.11 # use bundled library until dev-java/commons-compress is bumped, see bug #591696 diff --git a/sci-biology/igv/igv-2.3.92.ebuild b/sci-biology/igv/igv-2.3.92.ebuild index 8011ea888..b870b0e98 100644 --- a/sci-biology/igv/igv-2.3.92.ebuild +++ b/sci-biology/igv/igv-2.3.92.ebuild @@ -26,7 +26,7 @@ HOMEPAGE="http://www.broadinstitute.org/igv/" LICENSE="LGPL-2.1" SLOT="0" IUSE="" -KEYWORDS="" # see upstream issue #332 +KEYWORDS="" # actually more exactly the COMMON_DEPS should contain: # >=dev-java/commons-compress-1.11 # use bundled library until dev-java/commons-compress is bumped, see bug #591696 diff --git a/sci-biology/jtreeview-bin/jtreeview-bin-1.1.6.4.ebuild b/sci-biology/jtreeview-bin/jtreeview-bin-1.1.6.4.ebuild index 365c534bf..345c4eaf6 100644 --- a/sci-biology/jtreeview-bin/jtreeview-bin-1.1.6.4.ebuild +++ b/sci-biology/jtreeview-bin/jtreeview-bin-1.1.6.4.ebuild @@ -16,7 +16,7 @@ SRC_URI=" LICENSE="GPL-2" SLOT="0" -KEYWORDS="" # src_install is wrong somehow, TreeView.jar does not start +KEYWORDS="" IUSE="" DEPEND=" diff --git a/sci-biology/jtreeview/jtreeview-1.1.6.4.ebuild b/sci-biology/jtreeview/jtreeview-1.1.6.4.ebuild index f1e58af01..fab52dbd7 100644 --- a/sci-biology/jtreeview/jtreeview-1.1.6.4.ebuild +++ b/sci-biology/jtreeview/jtreeview-1.1.6.4.ebuild @@ -17,7 +17,7 @@ SRC_URI=" LICENSE="GPL-2" SLOT="0" -KEYWORDS="" # resulting java binary does not execute for me +KEYWORDS="" IUSE="" DEPEND=">virtual/jdk-1.5:* diff --git a/sci-biology/jtreeview/jtreeview-9999.ebuild b/sci-biology/jtreeview/jtreeview-9999.ebuild index 0d7a1be51..35d361230 100644 --- a/sci-biology/jtreeview/jtreeview-9999.ebuild +++ b/sci-biology/jtreeview/jtreeview-9999.ebuild @@ -12,7 +12,7 @@ EGIT_REPO_URI="https://bitbucket.org/TreeView3Dev/treeview3.git" LICENSE="MIT" SLOT="0" -KEYWORDS="" # builds and executes fines +KEYWORDS="" IUSE="" DEPEND=">virtual/jdk-1.7:*" diff --git a/sci-biology/libBigWig/libBigWig-0.4.0.ebuild b/sci-biology/libBigWig/libBigWig-0.4.0.ebuild index bd71899f7..92c7fc505 100644 --- a/sci-biology/libBigWig/libBigWig-0.4.0.ebuild +++ b/sci-biology/libBigWig/libBigWig-0.4.0.ebuild @@ -9,7 +9,7 @@ SRC_URI="https://github.com/dpryan79/libBigWig/archive/${PV}.tar.gz -> ${P}.tar. LICENSE="MIT" SLOT="0" -KEYWORDS="~amd64 ~x86" # https://github.com/dpryan79/libBigWig/issues/30 +KEYWORDS="~amd64 ~x86" IUSE="" DEPEND="net-misc/curl" diff --git a/sci-biology/libBigWig/libBigWig-9999.ebuild b/sci-biology/libBigWig/libBigWig-9999.ebuild index d470de250..a90395b0e 100644 --- a/sci-biology/libBigWig/libBigWig-9999.ebuild +++ b/sci-biology/libBigWig/libBigWig-9999.ebuild @@ -11,7 +11,7 @@ EGIT_REPO_URI="https://github.com/dpryan79/libBigWig.git" LICENSE="MIT" SLOT="0" -KEYWORDS="" # https://github.com/dpryan79/libBigWig/issues/30 +KEYWORDS="" IUSE="" DEPEND="net-misc/curl" diff --git a/sci-biology/mira/mira-4.9.5.ebuild b/sci-biology/mira/mira-4.9.5.ebuild index 7c888a5e7..5193618bc 100644 --- a/sci-biology/mira/mira-4.9.5.ebuild +++ b/sci-biology/mira/mira-4.9.5.ebuild @@ -21,7 +21,7 @@ S="${WORKDIR}"/"${PN}"-"${MY_PV}" SLOT="0" LICENSE="GPL-2" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~x86-macos" +KEYWORDS="~amd64 ~x86 ~x86-macos ~amd64-linux ~x86-linux" IUSE="doc" CDEPEND=" diff --git a/sci-biology/mne-python/mne-python-0.7.ebuild b/sci-biology/mne-python/mne-python-0.7.ebuild index 00e24590e..ed1648fca 100644 --- a/sci-biology/mne-python/mne-python-0.7.ebuild +++ b/sci-biology/mne-python/mne-python-0.7.ebuild @@ -15,7 +15,7 @@ LICENSE="BSD" SLOT="0" IUSE="test" #IUSE="cuda test" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" RDEPEND=" dev-python/numpy[${PYTHON_USEDEP}] diff --git a/sci-biology/nxtrim/nxtrim-9999.ebuild b/sci-biology/nxtrim/nxtrim-9999.ebuild index 9a12a0226..5c9da016c 100644 --- a/sci-biology/nxtrim/nxtrim-9999.ebuild +++ b/sci-biology/nxtrim/nxtrim-9999.ebuild @@ -11,7 +11,7 @@ EGIT_REPO_URI="https://github.com/sequencing/NxTrim.git" LICENSE="BSD-2" SLOT="0" -KEYWORDS="" # https://github.com/sequencing/NxTrim/issues/32 +KEYWORDS="" IUSE="" DEPEND="" diff --git a/sci-biology/oncotator/oncotator-1.9.2.0.ebuild b/sci-biology/oncotator/oncotator-1.9.2.0.ebuild index 77f439b6d..486c669b2 100644 --- a/sci-biology/oncotator/oncotator-1.9.2.0.ebuild +++ b/sci-biology/oncotator/oncotator-1.9.2.0.ebuild @@ -12,7 +12,7 @@ SRC_URI="https://github.com/broadinstitute/oncotator/archive/v${PV}.tar.gz -> ${ LICENSE="oncotator" SLOT="0" -KEYWORDS="~amd64 ~x86" # breaks silently during install because of python syntax errors +KEYWORDS="~amd64 ~x86" IUSE="" RESTRICT="fetch" diff --git a/sci-biology/phusion/phusion-2.1c.ebuild b/sci-biology/phusion/phusion-2.1c.ebuild index 7c72e31fd..54161ec02 100644 --- a/sci-biology/phusion/phusion-2.1c.ebuild +++ b/sci-biology/phusion/phusion-2.1c.ebuild @@ -14,7 +14,7 @@ LICENSE="all-rights-reserved" # temporarily placed value # Availability # Phusion is undergoing a rewrite of the code to make this a portable package. It will be made available free of charge to academic sites, but requires licensing for commercial use. For more information please contact the authors. SLOT="0" -KEYWORDS="" # compile process does not exit upon errors +KEYWORDS="" # one file does not compile # x86_64-pc-linux-gnu-gcc -O2 -pipe -maes -mpclmul -mpopcnt -mavx -march=native -o contigoverlap contigoverlap.o -lm # contigoverlap.o: In function `HashFasta': diff --git a/sci-biology/portrait/portrait-1.1.ebuild b/sci-biology/portrait/portrait-1.1.ebuild index 424ccfcd6..fd50849cb 100644 --- a/sci-biology/portrait/portrait-1.1.ebuild +++ b/sci-biology/portrait/portrait-1.1.ebuild @@ -22,7 +22,8 @@ RDEPEND=" # was only tested with sci-libs/libsvm-2.84 src_install(){ - sed -e 's/
//' -i *.pl || die "Failed to convert from DOS line endings to Unix" + sed -e 's/ +//' -i *.pl || die "Failed to convert from DOS line endings to Unix" sed -e 's#/home/rtarrial/prog#/usr/bin#' -i *.pl dobin *.pl dodoc README.txt diff --git a/sci-biology/pysamstats/pysamstats-0.24.2.ebuild b/sci-biology/pysamstats/pysamstats-0.24.2.ebuild index d6e1350a4..b81dd558d 100644 --- a/sci-biology/pysamstats/pysamstats-0.24.2.ebuild +++ b/sci-biology/pysamstats/pysamstats-0.24.2.ebuild @@ -14,7 +14,7 @@ SRC_URI="mirror://pypi/p/${PN}/${P}.tar.gz" LICENSE="MIT" SLOT="0" -KEYWORDS="" # needs working pysam, see bug #645060 +KEYWORDS="" IUSE="" DEPEND="dev-python/cython diff --git a/sci-biology/trans-abyss/trans-abyss-1.4.8.ebuild b/sci-biology/trans-abyss/trans-abyss-1.4.8.ebuild index 7ea4f3e3f..dbb2d668f 100644 --- a/sci-biology/trans-abyss/trans-abyss-1.4.8.ebuild +++ b/sci-biology/trans-abyss/trans-abyss-1.4.8.ebuild @@ -10,7 +10,7 @@ SRC_URI="http://www.bcgsc.ca/platform/bioinfo/software/trans-abyss/releases/${PV # http://www.bcgsc.ca/platform/bioinfo/license/bcca_2010 LICENSE="bcca_2010" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="" # perl and python diff --git a/sci-biology/trinityrnaseq/trinityrnaseq-2.6.6.ebuild b/sci-biology/trinityrnaseq/trinityrnaseq-2.6.6.ebuild index 238766eed..49865431b 100644 --- a/sci-biology/trinityrnaseq/trinityrnaseq-2.6.6.ebuild +++ b/sci-biology/trinityrnaseq/trinityrnaseq-2.6.6.ebuild @@ -14,7 +14,7 @@ SRC_URI="https://github.com/trinityrnaseq/trinityrnaseq/archive/Trinity-v${PV}.t LICENSE="BSD-BroadInstitute" SLOT="0" -KEYWORDS="" # PERL5INC path is wrong when /usr/bin/Trinity is executed +KEYWORDS="" IUSE="" DEPEND="" diff --git a/sci-biology/wcd/wcd-0.6.3.ebuild b/sci-biology/wcd/wcd-0.6.3.ebuild index f7abf6dc9..d4b797608 100644 --- a/sci-biology/wcd/wcd-0.6.3.ebuild +++ b/sci-biology/wcd/wcd-0.6.3.ebuild @@ -17,7 +17,7 @@ S="${WORKDIR}"/wcd-express-"${PV}" LICENSE="GPL-2" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="doc mpi threads" # This code (0.4.1 at least) has been tested using LAMMPI (RedHat, Suse, diff --git a/sci-chemistry/nwchem/nwchem-6.3_p2-r1.ebuild b/sci-chemistry/nwchem/nwchem-6.3_p2-r1.ebuild index 88cf72d30..980b6f392 100644 --- a/sci-chemistry/nwchem/nwchem-6.3_p2-r1.ebuild +++ b/sci-chemistry/nwchem/nwchem-6.3_p2-r1.ebuild @@ -15,7 +15,7 @@ SRC_URI="http://www.nwchem-sw.org/images/Nwchem-${PV%_p*}.revision${PV#*_p}-src. LICENSE="ECL-2.0" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="blas mpi doc examples nwchem-tests openmp mrcc python" REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} )" diff --git a/sci-chemistry/nwchem/nwchem-6.5_p26243-r7.ebuild b/sci-chemistry/nwchem/nwchem-6.5_p26243-r7.ebuild index 59af31a84..f11a699df 100644 --- a/sci-chemistry/nwchem/nwchem-6.5_p26243-r7.ebuild +++ b/sci-chemistry/nwchem/nwchem-6.5_p26243-r7.ebuild @@ -30,7 +30,7 @@ SRC_URI="http://www.nwchem-sw.org/images/Nwchem-${PV%_p*}.revision${PV#*_p}-src. LICENSE="ECL-2.0" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="blas cuda doc examples infiniband int64 lapack mrcc nwchem-tests openmp python scalapack" REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} ) diff --git a/sci-chemistry/nwchem/nwchem-6.6_p27746-r2.ebuild b/sci-chemistry/nwchem/nwchem-6.6_p27746-r2.ebuild index d57af8b29..fc2f110e9 100644 --- a/sci-chemistry/nwchem/nwchem-6.6_p27746-r2.ebuild +++ b/sci-chemistry/nwchem/nwchem-6.6_p27746-r2.ebuild @@ -19,7 +19,7 @@ SRC_URI="http://www.nwchem-sw.org/images/Nwchem-${PV%_p*}.revision${PV#*_p}-src. LICENSE="ECL-2.0" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="blas cuda doc examples infiniband int64 lapack mrcc nwchem-tests openmp python scalapack" REQUIRED_USE="python? ( ${PYTHON_REQUIRED_USE} ) diff --git a/sci-libs/fast5/fast5-0.6.4.ebuild b/sci-libs/fast5/fast5-0.6.4.ebuild index 181c2e593..bae49ffe0 100644 --- a/sci-libs/fast5/fast5-0.6.4.ebuild +++ b/sci-libs/fast5/fast5-0.6.4.ebuild @@ -13,7 +13,7 @@ SRC_URI="https://github.com/mateidavid/fast5/archive/v${PV}.tar.gz -> ${P}.tar.g LICENSE="MIT" SLOT="0" -KEYWORDS="" # the install step is broken (python modules integration, upstream binary code) +KEYWORDS="" IUSE="" DEPEND=" diff --git a/sci-libs/libfac/libfac-3.1.1.ebuild b/sci-libs/libfac/libfac-3.1.1.ebuild index 2f14bb0a0..e8f8749fa 100644 --- a/sci-libs/libfac/libfac-3.1.1.ebuild +++ b/sci-libs/libfac/libfac-3.1.1.ebuild @@ -13,7 +13,7 @@ SRC_URI="ftp://www.mathematik.uni-kl.de/pub/Math/Singular/Libfac/${PN}-${MY_PV}. LICENSE="GPL-2" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="singular" DEPEND=">=sci-libs/factory-${PV}[singular=]" diff --git a/sci-libs/libmatheval/libmatheval-1.1.10.ebuild b/sci-libs/libmatheval/libmatheval-1.1.10.ebuild index 8312a51ab..9b0144249 100644 --- a/sci-libs/libmatheval/libmatheval-1.1.10.ebuild +++ b/sci-libs/libmatheval/libmatheval-1.1.10.ebuild @@ -12,5 +12,5 @@ SRC_URI="mirror://gnu/${PN}/${PF}.tar.gz" LICENSE="GPL-2" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="static-libs" diff --git a/sci-libs/modglue/modglue-1.19.ebuild b/sci-libs/modglue/modglue-1.19.ebuild index 49024e8f8..9005c3f2b 100644 --- a/sci-libs/modglue/modglue-1.19.ebuild +++ b/sci-libs/modglue/modglue-1.19.ebuild @@ -13,7 +13,7 @@ RESTRICT="mirror" LICENSE="GPL-2" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="doc" RDEPEND="dev-libs/libsigc++:2" diff --git a/sci-libs/openblas/openblas-0.2.19-r1.ebuild b/sci-libs/openblas/openblas-0.2.19-r1.ebuild index 38378cecd..1bbbc4d8c 100644 --- a/sci-libs/openblas/openblas-0.2.19-r1.ebuild +++ b/sci-libs/openblas/openblas-0.2.19-r1.ebuild @@ -14,7 +14,7 @@ SRC_URI="https://github.com/xianyi/OpenBLAS/tarball/v${PV} -> ${P}.tar.gz LICENSE="BSD" SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos" +KEYWORDS="~amd64 ~x64-macos ~x86 ~x86-macos ~amd64-linux ~x86-linux" IUSE="dynamic openmp static-libs threads" RDEPEND="" diff --git a/sci-libs/openblas/openblas-0.2.20.ebuild b/sci-libs/openblas/openblas-0.2.20.ebuild index 838c334d6..4a352163a 100644 --- a/sci-libs/openblas/openblas-0.2.20.ebuild +++ b/sci-libs/openblas/openblas-0.2.20.ebuild @@ -13,7 +13,7 @@ SRC_URI="https://github.com/xianyi/OpenBLAS/tarball/v${PV} -> ${P}.tar.gz" LICENSE="BSD" SLOT="0" -KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux ~x64-macos ~x86-macos" +KEYWORDS="~amd64 ~x64-macos ~x86 ~x86-macos ~amd64-linux ~x86-linux" IUSE="dynamic openmp static-libs threads" RDEPEND="" diff --git a/sci-mathematics/cipi/cipi-1.0.ebuild b/sci-mathematics/cipi/cipi-1.0.ebuild index 7a9c098f8..03c1afef3 100644 --- a/sci-mathematics/cipi/cipi-1.0.ebuild +++ b/sci-mathematics/cipi/cipi-1.0.ebuild @@ -11,7 +11,7 @@ SRC_URI="https://github.com/tom111/cipi/archive/1.0.tar.gz -> ${P}.tar.gz" LICENSE="GPL-3" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="doc" DEPEND=" diff --git a/sci-mathematics/giac/giac-1.1.0.ebuild b/sci-mathematics/giac/giac-1.1.0.ebuild index d599fd75a..520a56151 100644 --- a/sci-mathematics/giac/giac-1.1.0.ebuild +++ b/sci-mathematics/giac/giac-1.1.0.ebuild @@ -9,7 +9,7 @@ SRC_URI="http://www-fourier.ujf-grenoble.fr/~parisse/${PN}/${P}.tar.bz2" LICENSE="GPL-2" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="doc examples fltk" AUTOTOOLS_IN_SOURCE_BUILD=true diff --git a/sci-mathematics/kash-bin/kash-bin-3.ebuild b/sci-mathematics/kash-bin/kash-bin-3.ebuild index 97a4ebc73..29ddbe0df 100644 --- a/sci-mathematics/kash-bin/kash-bin-3.ebuild +++ b/sci-mathematics/kash-bin/kash-bin-3.ebuild @@ -13,7 +13,7 @@ SRC_URI=" LICENSE="kash" SLOT="0" -KEYWORDS="~x86 ~amd64 ~x86-linux ~amd64-linux" +KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux" IUSE="" MY_P="kash3" diff --git a/sci-mathematics/lattE-macchiato/lattE-macchiato-0.9.3.ebuild b/sci-mathematics/lattE-macchiato/lattE-macchiato-0.9.3.ebuild index c78164c26..2b0505090 100644 --- a/sci-mathematics/lattE-macchiato/lattE-macchiato-0.9.3.ebuild +++ b/sci-mathematics/lattE-macchiato/lattE-macchiato-0.9.3.ebuild @@ -12,7 +12,7 @@ SRC_URI="http://www.math.ucdavis.edu/~mkoeppe/latte/download/latte-for-tea-too-1 SLOT="0" LICENSE="GPL-2" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="" DEPEND=" diff --git a/sci-mathematics/lie/lie-2.2.2.ebuild b/sci-mathematics/lie/lie-2.2.2.ebuild index b9fc34648..1e386d356 100644 --- a/sci-mathematics/lie/lie-2.2.2.ebuild +++ b/sci-mathematics/lie/lie-2.2.2.ebuild @@ -14,7 +14,7 @@ RESTRICT="mirror" LICENSE="LGPL-2.1" ##### See http://packages.debian.org/changelogs/pool/main/l/lie/lie_2.2.2+dfsg-1/lie.copyright SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="doc" DEPEND=" diff --git a/sci-mathematics/mathics/mathics-1.0.ebuild b/sci-mathematics/mathics/mathics-1.0.ebuild index 88726a6a9..622b488f1 100644 --- a/sci-mathematics/mathics/mathics-1.0.ebuild +++ b/sci-mathematics/mathics/mathics-1.0.ebuild @@ -15,7 +15,7 @@ S="${WORKDIR}/Mathics-${PV}" LICENSE="GPL-3" SLOT="0" IUSE="" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" RDEPEND=" ~dev-python/sympy-1.0[${PYTHON_USEDEP}] diff --git a/sci-mathematics/petsc/petsc-3.10.0.ebuild b/sci-mathematics/petsc/petsc-3.10.0.ebuild index 1755e242a..b67536ef6 100644 --- a/sci-mathematics/petsc/petsc-3.10.0.ebuild +++ b/sci-mathematics/petsc/petsc-3.10.0.ebuild @@ -15,7 +15,7 @@ SRC_URI="http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/${MY_P}.tar.gz" LICENSE="BSD-2" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="afterimage boost complex-scalars cxx debug doc fftw fortran hdf5 hypre mpi metis mumps scotch sparse superlu threads X" diff --git a/sci-mathematics/petsc/petsc-3.8.4.ebuild b/sci-mathematics/petsc/petsc-3.8.4.ebuild index 17757f6c0..c47619aaf 100644 --- a/sci-mathematics/petsc/petsc-3.8.4.ebuild +++ b/sci-mathematics/petsc/petsc-3.8.4.ebuild @@ -15,7 +15,7 @@ SRC_URI="http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/${MY_P}.tar.gz" LICENSE="BSD-2" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="afterimage boost complex-scalars cxx debug doc fftw fortran hdf5 hypre mpi metis mumps scotch sparse superlu threads X" diff --git a/sci-mathematics/petsc/petsc-3.9.4.ebuild b/sci-mathematics/petsc/petsc-3.9.4.ebuild index 1755e242a..b67536ef6 100644 --- a/sci-mathematics/petsc/petsc-3.9.4.ebuild +++ b/sci-mathematics/petsc/petsc-3.9.4.ebuild @@ -15,7 +15,7 @@ SRC_URI="http://ftp.mcs.anl.gov/pub/petsc/release-snapshots/${MY_P}.tar.gz" LICENSE="BSD-2" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="afterimage boost complex-scalars cxx debug doc fftw fortran hdf5 hypre mpi metis mumps scotch sparse superlu threads X" diff --git a/sci-mathematics/slepc/slepc-3.10.0.ebuild b/sci-mathematics/slepc/slepc-3.10.0.ebuild index eb250a909..5bd6c4b95 100644 --- a/sci-mathematics/slepc/slepc-3.10.0.ebuild +++ b/sci-mathematics/slepc/slepc-3.10.0.ebuild @@ -13,7 +13,7 @@ SRC_URI="http://slepc.upv.es/download/distrib/${P}.tar.gz" LICENSE="LGPL-3" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="complex-scalars doc mpi" PETSC_PV="$(get_version_component_range 1-2 ${PV})" diff --git a/sci-mathematics/slepc/slepc-3.8.2.ebuild b/sci-mathematics/slepc/slepc-3.8.2.ebuild index eb250a909..5bd6c4b95 100644 --- a/sci-mathematics/slepc/slepc-3.8.2.ebuild +++ b/sci-mathematics/slepc/slepc-3.8.2.ebuild @@ -13,7 +13,7 @@ SRC_URI="http://slepc.upv.es/download/distrib/${P}.tar.gz" LICENSE="LGPL-3" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="complex-scalars doc mpi" PETSC_PV="$(get_version_component_range 1-2 ${PV})" diff --git a/sci-mathematics/slepc/slepc-3.9.0.ebuild b/sci-mathematics/slepc/slepc-3.9.0.ebuild index eb250a909..5bd6c4b95 100644 --- a/sci-mathematics/slepc/slepc-3.9.0.ebuild +++ b/sci-mathematics/slepc/slepc-3.9.0.ebuild @@ -13,7 +13,7 @@ SRC_URI="http://slepc.upv.es/download/distrib/${P}.tar.gz" LICENSE="LGPL-3" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="complex-scalars doc mpi" PETSC_PV="$(get_version_component_range 1-2 ${PV})" diff --git a/sci-physics/fullprof-bin/fullprof-bin-20313.04.ebuild b/sci-physics/fullprof-bin/fullprof-bin-20313.04.ebuild index 085490296..8a4df4509 100644 --- a/sci-physics/fullprof-bin/fullprof-bin-20313.04.ebuild +++ b/sci-physics/fullprof-bin/fullprof-bin-20313.04.ebuild @@ -11,7 +11,7 @@ LICENSE="freedist HPND" # There is no clear license specified. But according to Docs/Readme_Fp_Suite.txt # those two seem to be appropriate. SLOT="0" -KEYWORDS="~x86 ~amd64 -*" +KEYWORDS="-* ~amd64 ~x86" IUSE="+doc +examples +X" RDEPEND="X? ( x11-libs/motif:0 )" diff --git a/sys-cluster/hpl/hpl-2.0-r1.ebuild b/sys-cluster/hpl/hpl-2.0-r1.ebuild index ffa15742e..8b80e4c1c 100644 --- a/sys-cluster/hpl/hpl-2.0-r1.ebuild +++ b/sys-cluster/hpl/hpl-2.0-r1.ebuild @@ -11,7 +11,7 @@ SRC_URI="http://www.netlib.org/benchmark/hpl/hpl-${PV}.tar.gz" SLOT="0" LICENSE="HPL" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="doc" RDEPEND=" diff --git a/sys-cluster/hpl/hpl-2.1.ebuild b/sys-cluster/hpl/hpl-2.1.ebuild index 64d3e3a25..ba91a5d66 100644 --- a/sys-cluster/hpl/hpl-2.1.ebuild +++ b/sys-cluster/hpl/hpl-2.1.ebuild @@ -11,7 +11,7 @@ SRC_URI="http://www.netlib.org/benchmark/hpl/hpl-${PV}.tar.gz" SLOT="0" LICENSE="HPL" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="doc" RDEPEND=" diff --git a/sys-cluster/modules/modules-3.2.9c-r1.ebuild b/sys-cluster/modules/modules-3.2.9c-r1.ebuild index c8823b46e..43f0ab91d 100644 --- a/sys-cluster/modules/modules-3.2.9c-r1.ebuild +++ b/sys-cluster/modules/modules-3.2.9c-r1.ebuild @@ -11,7 +11,7 @@ SRC_URI="http://sourceforge.net/projects/modules/files/Modules/${P%[a-z]}/${P}.t LICENSE="GPL-2" SLOT="0" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="X" DEPEND=" diff --git a/sys-cluster/mvapich2/mvapich2-1.6-r1.ebuild b/sys-cluster/mvapich2/mvapich2-1.6-r1.ebuild index d3c665e2c..8ed791509 100644 --- a/sys-cluster/mvapich2/mvapich2-1.6-r1.ebuild +++ b/sys-cluster/mvapich2/mvapich2-1.6-r1.ebuild @@ -11,7 +11,7 @@ SRC_URI="${HOMEPAGE}/download/mvapich2/mvapich2-${PV/_/-}.tgz" SLOT="0" LICENSE="BSD" -KEYWORDS="~x86 ~amd64" +KEYWORDS="~amd64 ~x86" IUSE="debug fortran large-cluster medium-cluster romio threads" RDEPEND=" diff --git a/virtual/perl-encoding-warnings/perl-encoding-warnings-0.11.ebuild b/virtual/perl-encoding-warnings/perl-encoding-warnings-0.11.ebuild index 926c12d1a..d3dfa34a1 100644 --- a/virtual/perl-encoding-warnings/perl-encoding-warnings-0.11.ebuild +++ b/virtual/perl-encoding-warnings/perl-encoding-warnings-0.11.ebuild @@ -9,7 +9,7 @@ SRC_URI="" LICENSE="" SLOT="0" -KEYWORDS=" ~amd64 ~x86" +KEYWORDS="~amd64 ~x86" IUSE="" RDEPEND="~perl-core/${PN#perl-}-${PV}" |