diff options
Diffstat (limited to 'sci-biology/SEECER/SEECER-0.1.3-r2.ebuild')
| -rw-r--r-- | sci-biology/SEECER/SEECER-0.1.3-r2.ebuild | 7 |
1 files changed, 5 insertions, 2 deletions
diff --git a/sci-biology/SEECER/SEECER-0.1.3-r2.ebuild b/sci-biology/SEECER/SEECER-0.1.3-r2.ebuild index 60862d8c8..0b7ec3bfa 100644 --- a/sci-biology/SEECER/SEECER-0.1.3-r2.ebuild +++ b/sci-biology/SEECER/SEECER-0.1.3-r2.ebuild @@ -5,7 +5,7 @@ EAPI=6 inherit eutils -DESCRIPTION="SEquencing Error Corrector for RNA-Seq reads" +DESCRIPTION="SEquence Error Corrector for RNA-Seq reads" HOMEPAGE="http://sb.cs.cmu.edu/seecer/" SRC_URI=" http://sb.cs.cmu.edu/seecer/downloads/"${P}".tar.gz @@ -22,12 +22,15 @@ DEPEND=" sci-libs/gsl:0= sci-biology/seqan:0=" RDEPEND="${DEPEND} - =sci-biology/jellyfish-1.1.11" + =sci-biology/jellyfish-1.1.11-r1" S="${S}"/SEECER PATCHES=( "${FILESDIR}"/remove-hardcoded-paths.patch + "${FILESDIR}"/run_seecer.sh.patch + "${FILESDIR}"/run_jellyfish.sh.patch + "${FILESDIR}"/rename_jellyfish_binary.patch ) src_prepare(){ |