1 files changed, 33 insertions, 0 deletions
diff --git a/sci-biology/SEECER/SEECER-0.1.3.ebuild b/sci-biology/SEECER/SEECER-0.1.3.ebuild
new file mode 100644
index 000000000..7f3833ea7
--- /dev/null
+++ b/sci-biology/SEECER/SEECER-0.1.3.ebuild
@@ -0,0 +1,33 @@
+# Copyright 1999-2015 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+DESCRIPTION="Error corrector for RNA-Seq reads"
+HOMEPAGE="http://sb.cs.cmu.edu/seecer/"
+SRC_URI="http://sb.cs.cmu.edu/seecer/downloads/SEECER-0.1.3.tar.gz
+	http://sb.cs.cmu.edu/seecer/downloads/manual.pdf"
+
+LICENSE=""
+SLOT="0"
+KEYWORDS=""
+IUSE=""
+
+DEPEND="sci-libs/gsl
+	sci-biology/seqan
+	sci-biology/jellyfish"
+RDEPEND="${DEPEND}"
+
+S="${S}"/SEECER
+
+# doh, it install /usr/bin/seecer (note the lowercase letters)
+
+# checking for x86_64-pc-linux-gnu-gcc option to support OpenMP... -fopenmp
+# 
+# Uses:
+#         libgomp.so.1 => /usr/lib/gcc/x86_64-pc-linux-gnu/4.8.3/libgomp.so.1 (0x00007f7853faf000)
+
+
+# dobin bin/run_seecer.sh
+# dodoc "${DISTDIR}"/manual.pdf