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Diffstat (limited to 'sci-biology/Scaffolder-evaluation/Scaffolder-evaluation-9999.ebuild')
-rw-r--r--sci-biology/Scaffolder-evaluation/Scaffolder-evaluation-9999.ebuild38
1 files changed, 0 insertions, 38 deletions
diff --git a/sci-biology/Scaffolder-evaluation/Scaffolder-evaluation-9999.ebuild b/sci-biology/Scaffolder-evaluation/Scaffolder-evaluation-9999.ebuild
deleted file mode 100644
index 4e291ece2..000000000
--- a/sci-biology/Scaffolder-evaluation/Scaffolder-evaluation-9999.ebuild
+++ /dev/null
@@ -1,38 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-PYTHON_COMPAT=( python3_{7,8,9} )
-
-inherit python-r1 perl-functions git-r3
-
-DESCRIPTION="Scripts to run genome assembly scaffolding tools and analyse output for accuracy"
-HOMEPAGE="https://github.com/martinghunt/Scaffolder-evaluation
- https://genomebiology.biomedcentral.com/articles/10.1186/gb-2014-15-3-r42"
-EGIT_REPO_URI="https://github.com/martinghunt/Scaffolder-evaluation.git"
-
-LICENSE="GPL-3"
-SLOT="0"
-KEYWORDS=""
-
-REQUIRED_USE="${PYTHON_REQUIRED_USE}"
-
-DEPEND="${PYTHON_DEPS}"
-RDEPEND="${DEPEND}
- dev-lang/perl
- dev-lang/R
- media-gfx/graphviz
- sci-biology/mummer
- sci-biology/bowtie
- sci-biology/samtools
- sci-biology/ncbi-tools
- sci-biology/Fastaq[${PYTHON_USEDEP}]
-"
-
-src_install(){
- python_foreach_impl python_doscript Analysis-scripts/*.py
- dobin Analysis-scripts/*.sh
- perl_domodule Wrapper-scripts/*
- dodoc README.md
-}