1 files changed, 0 insertions, 35 deletions
diff --git a/sci-biology/VarScan/VarScan-2.4.3.ebuild b/sci-biology/VarScan/VarScan-2.4.3.ebuild
deleted file mode 100644
index 0b3fc2ad5..000000000
--- a/sci-biology/VarScan/VarScan-2.4.3.ebuild
+++ /dev/null
@@ -1,35 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit java-pkg-2
-
-DESCRIPTION="Variant detection (germline, multi-sample, somatic mutations, CNA, SNP calls)"
-HOMEPAGE="http://varscan.sourceforge.net/"
-
-# binary
-#https://github.com/dkoboldt/varscan/blob/master/VarScan.v2.4.3.jar
-SRC_URI="https://github.com/dkoboldt/varscan/blob/master/VarScan.v2.4.3.source.jar?raw=true -> ${PN}.v${PV}.source.jar"
-
-LICENSE="Non-profit-OSL-3.0"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE=""
-
-DEPEND="
-	>=virtual/jdk-1.5:*
-	!sci-biology/VarScan-bin"
-RDEPEND=">=virtual/jre-1.5:*
-	sci-biology/bam-readcount"
-
-S="${WORKDIR}"/net/sf/varscan
-
-src_compile(){
-	javac *.java
-}
-
-src_install(){
-	java-pkg_newjar "${DISTDIR}"/${PN}.v${PV}.source.jar ${PN}.source.jar
-	java-pkg_dolauncher VarScan
-}