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Diffstat (limited to 'sci-biology/autoeditor/autoeditor-1.20.ebuild')
| -rw-r--r-- | sci-biology/autoeditor/autoeditor-1.20.ebuild | 40 |
1 files changed, 0 insertions, 40 deletions
diff --git a/sci-biology/autoeditor/autoeditor-1.20.ebuild b/sci-biology/autoeditor/autoeditor-1.20.ebuild deleted file mode 100644 index 5e4c631b7..000000000 --- a/sci-biology/autoeditor/autoeditor-1.20.ebuild +++ /dev/null @@ -1,40 +0,0 @@ -# Copyright 1999-2015 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=5 - -inherit eutils - -DESCRIPTION="Automatic correct of discrepancies in multiple sequence alignments" -HOMEPAGE="http://sourceforge.net/apps/mediawiki/amos/index.php?title=AutoEditor" -SRC_URI=" - ftp://ftp.cbcb.umd.edu/pub/software/autoEditor/autoEditor-1.20.tar.gz - test? ( ftp://ftp.cbcb.umd.edu/pub/software/autoEditor/autoEditor-1.20-sample.tar.gz )" - -LICENSE="Artistic" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="test" - -DEPEND=" - >=sci-libs/io_lib-1.8.11 - sci-biology/tigr-foundation-libs - sys-libs/zlib" -RDEPEND="${DEPEND}" - -S="${WORKDIR}"/autoEditor-1.20 - -src_prepare(){ - epatch "${FILESDIR}"/Makefile.patch - rm -rf TigrFoundation-2.0 || die "Failed to drop TigrFoundation-2.0/" -} - -# TODO: -# * QA Notice: Package has poor programming practices which may compile -# * fine but exhibit random runtime failures. -# * getConsQV.c:1051: warning: implicit declaration of function 'memset' - -src_test(){ - emake sample > sample.out - diff -u -w "${FILESDIR}"/sample_expected.out sample.out || die -} |