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Diffstat (limited to 'sci-biology/barrnap/barrnap-0.4.ebuild')
-rw-r--r--sci-biology/barrnap/barrnap-0.4.ebuild42
1 files changed, 0 insertions, 42 deletions
diff --git a/sci-biology/barrnap/barrnap-0.4.ebuild b/sci-biology/barrnap/barrnap-0.4.ebuild
deleted file mode 100644
index f4559fddc..000000000
--- a/sci-biology/barrnap/barrnap-0.4.ebuild
+++ /dev/null
@@ -1,42 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-inherit perl-module
-
-DESCRIPTION="Predict Bacterial and Archaeal rRNA genes and output in GFF3 format"
-HOMEPAGE="http://www.vicbioinformatics.com/software.barrnap.shtml"
-SRC_URI="http://www.vicbioinformatics.com/"${P}".tar.gz"
-
-LICENSE="GPL-3"
-SLOT="0"
-KEYWORDS="~amd64"
-IUSE=""
-
-# contains bundled binaries of hmmer-3.1 (dev version)
-# needs >=perl-5.6
-
-DEPEND=""
-RDEPEND="${DEPEND}
- dev-lang/perl:=
- sci-biology/nesoni"
-
-src_install(){
- # the below recreates the whole layout
- insinto /usr/share/"${PN}"/bin
- doins bin/barrnap
- chmod a+rx "${ED}"/usr/share/"${PN}"/bin/barrnap || die
- insinto /usr/share/"${PN}"/binaries/linux
- doins binaries/linux/nhmmer
- chmod a+rx "${ED}"/usr/share/"${PN}"/binaries/linux/nhmmer || die
- insinto /usr/share/"${PN}"/db
- doins db/*
- insinto /usr/share/"${PN}"/examples
- doins examples/*
-
- echo PATH=/usr/share/"${PN}"/bin:$PATH > "${S}"/99barrnap
- doenvd "${S}"/99barrnap
-
- dodoc README.md
-}