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Diffstat (limited to 'sci-biology/bioperl/bioperl-1.6.901.ebuild')
-rw-r--r--sci-biology/bioperl/bioperl-1.6.901.ebuild81
1 files changed, 0 insertions, 81 deletions
diff --git a/sci-biology/bioperl/bioperl-1.6.901.ebuild b/sci-biology/bioperl/bioperl-1.6.901.ebuild
deleted file mode 100644
index 98d0763c1..000000000
--- a/sci-biology/bioperl/bioperl-1.6.901.ebuild
+++ /dev/null
@@ -1,81 +0,0 @@
-# Copyright 1999-2009 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: /var/cvsroot/gentoo-x86/sci-biology/bioperl/bioperl-1.6.1.ebuild,v 1.3 2009/10/02 14:51:51 weaver Exp $
-
-EAPI="2"
-
-inherit perl-module
-
-SUBPROJECTS="+db +network +run"
-MIN_PV="1.6"
-
-DESCRIPTION="Perl tools for bioinformatics - Core modules"
-HOMEPAGE="http://www.bioperl.org/"
-# SRC_URI="http://www.bioperl.org/DIST/BioPerl-${PV}.tar.bz2"
-SRC_URI="http://www.cpan.org/authors/id/C/CJ/CJFIELDS/BioPerl-${PV}.tar.gz"
-
-LICENSE="Artistic GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="-minimal graphviz sqlite ${SUBPROJECTS}"
-
-CDEPEND=">=perl-core/Module-Build-0.380.0
- dev-perl/Data-Stag
- dev-perl/libwww-perl
- !minimal? (
- dev-perl/Ace
- dev-perl/Spreadsheet-ParseExcel
- dev-perl/Spreadsheet-WriteExcel
- >=dev-perl/XML-SAX-0.15
- dev-perl/Graph
- dev-perl/SOAP-Lite
- dev-perl/Array-Compare
- dev-perl/SVG
- dev-perl/XML-Simple
- dev-perl/XML-Parser
- dev-perl/XML-Twig
- >=dev-perl/HTML-Parser-3.60
- >=dev-perl/XML-Writer-0.4
- dev-perl/Clone
- dev-perl/XML-DOM
- dev-perl/set-scalar
- dev-perl/XML-XPath
- dev-perl/XML-DOM-XPath
- dev-perl/Algorithm-Munkres
- dev-perl/Data-Stag
- dev-perl/Math-Random
- dev-perl/PostScript
- dev-perl/Convert-Binary-C
- dev-perl/SVG-Graph
- dev-perl/IO-String
- dev-perl/Class-Inspector
- dev-perl/Sort-Naturally
- )
- graphviz? ( dev-perl/GraphViz )
- sqlite? ( dev-perl/DBD-SQLite )"
-DEPEND="virtual/perl-Module-Build
- ${CDEPEND}"
-# In perl-overlay
-# >=virtual/perl-ExtUtils-Manifest-1.52 (to CDEPEND?)
-# >=perl-CPAN/perl-CPAN-1.81
-RDEPEND="${CDEPEND}"
-PDEPEND="!minimal? ( dev-perl/Bio-ASN1-EntrezGene )
- db? ( >=sci-biology/bioperl-db-${MIN_PV} )
- network? ( >=sci-biology/bioperl-network-${MIN_PV} )
- run? ( >=sci-biology/bioperl-run-${MIN_PV} )"
-
-S="${WORKDIR}/BioPerl-${PV}"
-
-src_configure() {
- sed -i -e '/add_post_install_script.*symlink_script.pl/d' \
- -e "/'CPAN' *=> *1.81/d" \
- -e "/'ExtUtils::Manifest' *=> *'1.52'/d" "${S}/Build.PL" || die
-
- if use minimal && use graphviz; then die "USE flags minimal and graphviz cannot be used together"; fi
- perl-module_src_configure
-}
-
-src_install() {
- mydoc="AUTHORS BUGS FAQ"
- perl-module_src_install
-}