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Diffstat (limited to 'sci-biology/biopython/biopython-1.62.ebuild')
| -rw-r--r-- | sci-biology/biopython/biopython-1.62.ebuild | 49 |
1 files changed, 49 insertions, 0 deletions
diff --git a/sci-biology/biopython/biopython-1.62.ebuild b/sci-biology/biopython/biopython-1.62.ebuild new file mode 100644 index 000000000..9413e775b --- /dev/null +++ b/sci-biology/biopython/biopython-1.62.ebuild @@ -0,0 +1,49 @@ +# Copyright 1999-2013 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: /var/cvsroot/gentoo-x86/sci-biology/biopython/biopython-1.61.ebuild,v 1.3 2013/07/02 12:47:34 jlec Exp $ + +EAPI=5 + +PYTHON_COMPAT=( python{2_5,2_6,2_7,3_3} ) + +inherit distutils-r1 + +DESCRIPTION="Python modules for computational molecular biology" +HOMEPAGE="http://www.biopython.org/ http://pypi.python.org/pypi/biopython/" +SRC_URI="http://biopython.org/DIST/biopython-1.62.tar.gz" + +LICENSE="HPND" +SLOT="0" +KEYWORDS="~amd64 ~ppc ~x86 ~amd64-linux ~x86-linux" +IUSE="mysql postgres" + +REQUIRED_USE="${PYTHON_REQUIRED_USE}" + +RDEPEND="${PYTHON_DEPS} + dev-python/matplotlib[${PYTHON_USEDEP}] + dev-python/networkx[${PYTHON_USEDEP}] + dev-python/numpy[${PYTHON_USEDEP}] + dev-python/pygraphviz[${PYTHON_USEDEP}] + dev-python/reportlab[${PYTHON_USEDEP}] + media-gfx/pydot[${PYTHON_USEDEP}] + mysql? ( dev-python/mysql-python[${PYTHON_USEDEP}] ) + postgres? ( dev-python/psycopg[${PYTHON_USEDEP}] )" +DEPEND="${RDEPEND} + sys-devel/flex" + +DOCS=( CONTRIB DEPRECATED NEWS README ) +S="${WORKDIR}/biopython-1.62" + +python_test() { + cd Tests + ${PYTHON} run_tests.py +} + +python_install_all() { + distutils-r1_python_install_all + + insinto /usr/share/doc/${PF} + doins -r Doc/* + insinto /usr/share/${PN} + cp -r --preserve=mode Scripts Tests "${ED}"/usr/share/${PN} || die +} |