diff options
Diffstat (limited to 'sci-biology/blue/blue-1.1.2.ebuild')
-rw-r--r-- | sci-biology/blue/blue-1.1.2.ebuild | 31 |
1 files changed, 31 insertions, 0 deletions
diff --git a/sci-biology/blue/blue-1.1.2.ebuild b/sci-biology/blue/blue-1.1.2.ebuild new file mode 100644 index 000000000..52ca61484 --- /dev/null +++ b/sci-biology/blue/blue-1.1.2.ebuild @@ -0,0 +1,31 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +DESCRIPTION="Error corrector for Illummina and Roche/454 able to also fix insertions and deletions" +HOMEPAGE="http://www.csiro.au/Outcomes/ICT-and-Services/Software/Blue.aspx" +SRC_URI="http://www.csiro.au/~/media/CSIROau/Images/Bioinformatics/Blue_software/Version_1-1-2/Linux112.ashx -> "${P}".tar.gz + http://www.csiro.au/~/media/CSIROau/Images/Bioinformatics/Blue_software/Version_1-1-2/Correcting_reads_with_Blue.ashx -> Correcting_reads_with_Blue.pdf" + +LICENSE="GPL" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND="dev-lang/mono" +RDEPEND="${DEPEND}" + +S="${WORKDIR}"/Linux + +src_compile(){ + Blue/compile.sh || die + Tessel/compile.sh || die + GenerateMerPairs/compile.sh || die +} + +src_install(){ + dobin Tessel.exe GenerateMerPairs.exe Blue.exe + # BUG: probably have to install also the *.exe.so files +} |