diff options
Diffstat (limited to 'sci-biology/bwa/bwa-0.7.12.ebuild')
-rw-r--r-- | sci-biology/bwa/bwa-0.7.12.ebuild | 31 |
1 files changed, 31 insertions, 0 deletions
diff --git a/sci-biology/bwa/bwa-0.7.12.ebuild b/sci-biology/bwa/bwa-0.7.12.ebuild new file mode 100644 index 000000000..353c4bf93 --- /dev/null +++ b/sci-biology/bwa/bwa-0.7.12.ebuild @@ -0,0 +1,31 @@ +# Copyright 1999-2015 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +EAPI=5 + +inherit base toolchain-funcs + +DESCRIPTION="Burrows-Wheeler Alignment Tool, a fast short genomic sequence aligner" +HOMEPAGE="http://bio-bwa.sourceforge.net/" +SRC_URI="mirror://sourceforge/bio-bwa/${P}.tar.bz2" + +LICENSE="GPL-3" +SLOT="0" +IUSE="" +KEYWORDS="~amd64 ~x86 ~x64-macos" + +PATCHES=( "${FILESDIR}"/${PN}_Makefile.patch ) + +src_compile() { + tc-export CC AR + default +} + +src_install() { + dobin bwa || die + doman bwa.1 || die + exeinto /usr/share/${PN} + doexe qualfa2fq.pl xa2multi.pl || die + dodoc NEWS.md README-alt.md README.md || die +} |