diff options
Diffstat (limited to 'sci-biology/caftools/caftools-2.0.2.ebuild')
-rw-r--r-- | sci-biology/caftools/caftools-2.0.2.ebuild | 45 |
1 files changed, 0 insertions, 45 deletions
diff --git a/sci-biology/caftools/caftools-2.0.2.ebuild b/sci-biology/caftools/caftools-2.0.2.ebuild deleted file mode 100644 index 7d58f3375..000000000 --- a/sci-biology/caftools/caftools-2.0.2.ebuild +++ /dev/null @@ -1,45 +0,0 @@ -# Copyright 1999-2021 Gentoo Authors -# Distributed under the terms of the GNU General Public License v2 - -EAPI=7 - -DESCRIPTION="Manipulate CAF files and convert to GAP4 format (not GAP5), ACE, PHRAP" -HOMEPAGE="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC310697/" -SRC_URI=" - ftp://ftp.sanger.ac.uk/pub/PRODUCTION_SOFTWARE/src/${P}.tar.gz - ftp://ftp.sanger.ac.uk/pub/PRODUCTION_SOFTWARE/src/${PN}-2.0.tar.gz" - -LICENSE="GRL" -SLOT="0" -KEYWORDS="~amd64 ~x86" - -DEPEND=" - sci-libs/io_lib - dev-lang/perl" -RDEPEND="${DEPEND}" - -PATCHES=( - "${FILESDIR}"/Makefile.in-"${PV}".patch -) - -src_prepare(){ - default - mv "${WORKDIR}"/caftools-2.0/man/*.{1,5} "${S}"/man/ || die -} - -src_configure(){ - default - sed \ - -e 's:prefix = /usr:prefix = $(DESTDIR)/usr:' \ - -i Makefile src/Makefile || die -} - -# TODO: the 2.0.2 archive lacks manpages compared to 2.0, FIXME -# The man/Makefile.in is screwed in 2.0.2 so we cannot use it to install the manpage files, -# not even copying over whole caftools-2.0/man/ to caftools-2.0.2/man does not help. -src_install(){ - default - doman man/*.[1-5] || die - elog "Some usage info is at http://sarton.imb-jena.de/software/consed2gap/" - elog "for some reason caf_find_misassemblies is gone from 2.0.2 version" -} |