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-rw-r--r--sci-biology/generecon/ChangeLog10
-rw-r--r--sci-biology/generecon/Manifest20
-rw-r--r--sci-biology/generecon/files/digest-generecon-1.2.1-r13
-rw-r--r--sci-biology/generecon/files/generecon-docfiles.patch12
-rw-r--r--sci-biology/generecon/generecon-1.2.1-r1.ebuild37
-rw-r--r--sci-biology/generecon/metadata.xml9
6 files changed, 0 insertions, 91 deletions
diff --git a/sci-biology/generecon/ChangeLog b/sci-biology/generecon/ChangeLog
deleted file mode 100644
index ff5a98428..000000000
--- a/sci-biology/generecon/ChangeLog
+++ /dev/null
@@ -1,10 +0,0 @@
-# ChangeLog for sci-biology/generecon
-# Copyright 1999-2006 Gentoo Foundation; Distributed under the GPL v2
-# $Header: $
-
-*generecon-1.2.1 (19 Apr 2006)
-
- 19 Apr 2006; Lucas Chiesa <lucas.chiesa@gmail.com>:
- +generecon-1.2.1.ebuild, +metadata.xml, +ChangeLog,
- Initial import. Thanks to Neil <nshephard@gmail.com>
- for the initial ebuild. Closes bug #128514.
diff --git a/sci-biology/generecon/Manifest b/sci-biology/generecon/Manifest
deleted file mode 100644
index 83fec8d58..000000000
--- a/sci-biology/generecon/Manifest
+++ /dev/null
@@ -1,20 +0,0 @@
-AUX generecon-docfiles.patch 435 RMD160 ce732399b02f42a0089ea82ea240098dfb8207c5 SHA1 4f6ed16b9ce8f118b99a47d9e36ffa304e42e8bb SHA256 37fbf94d6716a489e6a59f119cf617b9ff024e612dc96323d2297f9c09360175
-MD5 537dc4e80ebe82b913290cfc7a0f6144 files/generecon-docfiles.patch 435
-RMD160 ce732399b02f42a0089ea82ea240098dfb8207c5 files/generecon-docfiles.patch 435
-SHA256 37fbf94d6716a489e6a59f119cf617b9ff024e612dc96323d2297f9c09360175 files/generecon-docfiles.patch 435
-DIST generecon-1.2.1.tar.gz 238270 RMD160 f625ec81db88556a33e76f63c5c242b70e951f0f SHA1 a1562a21eab88d6ac1b2d2c046b87414ff703d4b SHA256 b35496ab6baf0bda45dc7a934385441cc92bfac39cb0a261a541ad8b258ba446
-EBUILD generecon-1.2.1-r1.ebuild 1015 RMD160 0108cae8648d7e7831f18194e07f6796ac018fbc SHA1 7a77fcab817a6a70f4f7ae08ce71e9224d48ffa4 SHA256 b4b07aaab53f7a16cb2a1cc1b5c5d76df7198c2d012a25fe35a62de17b5cfb5f
-MD5 c793459ba1d3a6a3ffc81dd783c9edb1 generecon-1.2.1-r1.ebuild 1015
-RMD160 0108cae8648d7e7831f18194e07f6796ac018fbc generecon-1.2.1-r1.ebuild 1015
-SHA256 b4b07aaab53f7a16cb2a1cc1b5c5d76df7198c2d012a25fe35a62de17b5cfb5f generecon-1.2.1-r1.ebuild 1015
-MISC ChangeLog 363 RMD160 19d0d4926d34d52c906e11fef60b3d7d713c0b4f SHA1 d3248b7ba9d5b2aa8af1c6c77802199041720c0e SHA256 9a3bb08c6357408656ecf892cbe5e25eb62f53211e8276237b383d7548755242
-MD5 29a1e620d057818eb5edbc12f4c1f9ac ChangeLog 363
-RMD160 19d0d4926d34d52c906e11fef60b3d7d713c0b4f ChangeLog 363
-SHA256 9a3bb08c6357408656ecf892cbe5e25eb62f53211e8276237b383d7548755242 ChangeLog 363
-MISC metadata.xml 261 RMD160 d7630eceb5ae049fa36c58ed3c9f6fe7780c15bf SHA1 6ded05d9eaded2a6b810b7f80dd2dc3270bbff8e SHA256 8bbae243cac9cf6fc1d24a0582390bd1184df161f4d7f87300874e6a7860b15c
-MD5 5cfd1e62f34b60928bc68a829d31d4eb metadata.xml 261
-RMD160 d7630eceb5ae049fa36c58ed3c9f6fe7780c15bf metadata.xml 261
-SHA256 8bbae243cac9cf6fc1d24a0582390bd1184df161f4d7f87300874e6a7860b15c metadata.xml 261
-MD5 290f19d04f4c5d01712c2acb82451690 files/digest-generecon-1.2.1-r1 247
-RMD160 b8e2df20a2475c5a5d2866b0f7dff927a1021b5c files/digest-generecon-1.2.1-r1 247
-SHA256 e444905c55f0025a00372c2456d27b2b7cedfe82e03b7fd54807f26646903eed files/digest-generecon-1.2.1-r1 247
diff --git a/sci-biology/generecon/files/digest-generecon-1.2.1-r1 b/sci-biology/generecon/files/digest-generecon-1.2.1-r1
deleted file mode 100644
index 03adaf567..000000000
--- a/sci-biology/generecon/files/digest-generecon-1.2.1-r1
+++ /dev/null
@@ -1,3 +0,0 @@
-MD5 bda6f2a7c40ddbe5f694050a299ef6a4 generecon-1.2.1.tar.gz 238270
-RMD160 f625ec81db88556a33e76f63c5c242b70e951f0f generecon-1.2.1.tar.gz 238270
-SHA256 b35496ab6baf0bda45dc7a934385441cc92bfac39cb0a261a541ad8b258ba446 generecon-1.2.1.tar.gz 238270
diff --git a/sci-biology/generecon/files/generecon-docfiles.patch b/sci-biology/generecon/files/generecon-docfiles.patch
deleted file mode 100644
index 79d63e73f..000000000
--- a/sci-biology/generecon/files/generecon-docfiles.patch
+++ /dev/null
@@ -1,12 +0,0 @@
-diff -Nuar generecon-1.2.1.orig/Makefile.am generecon-1.2.1/Makefile.am
---- generecon-1.2.1.orig/Makefile.am 2006-04-19 12:52:18.000000000 -0300
-+++ generecon-1.2.1/Makefile.am 2006-04-19 12:55:53.000000000 -0300
-@@ -31,7 +31,7 @@
- bin_PROGRAMS = generecon
-
-
--docdir = ${prefix}/share/generecon/doc
-+docdir = ${prefix}/share/doc/#PF#
- dist_doc_DATA =
- test_inputdir = ${prefix}/share/generecon/test-input
- dist_test_input_DATA =
diff --git a/sci-biology/generecon/generecon-1.2.1-r1.ebuild b/sci-biology/generecon/generecon-1.2.1-r1.ebuild
deleted file mode 100644
index 7adfb5cf5..000000000
--- a/sci-biology/generecon/generecon-1.2.1-r1.ebuild
+++ /dev/null
@@ -1,37 +0,0 @@
-# Copyright 1999-2007 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-# $Header: $
-
-inherit eutils
-
-DESCRIPTION="Generecon performs linkage disequilibrium gene mapping based on coalescent theory using Bayesian Markov Chain Monte Carlo methods."
-HOMEPAGE="http://www.daimi.au.dk/~mailund/GeneRecon/"
-SRC_URI="http://www.daimi.au.dk/~mailund/GeneRecon/download/${P}.tar.gz"
-SLOT="0"
-
-# License of the package. This must match the name of file(s) in
-# /usr/portage/licenses/. For complex license combination see the developer
-# docs on gentoo.org for details.
-LICENSE="GPL-2"
-
-KEYWORDS="x86"
-
-DEPEND="dev-scheme/guile
- sci-libs/gsl"
-
-src_unpack() {
- unpack ${A}
- sed 's|#PF#|'${PF}'|g' ${FILESDIR}/${PN}-docfiles.patch > ${PN}-docfiles.patch
-
- epatch ${PN}-docfiles.patch
-
- cd ${S}
- pwd
- einfo "Regenerating autotools files..."
- aclocal || die "aclocal failed"
- automake || die "automake failed"
-}
-
-src_install() {
- make DESTDIR=${D} install || die "make install failed"
-}
diff --git a/sci-biology/generecon/metadata.xml b/sci-biology/generecon/metadata.xml
deleted file mode 100644
index 963198591..000000000
--- a/sci-biology/generecon/metadata.xml
+++ /dev/null
@@ -1,9 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <herd>sci</herd>
- <maintainer>
- <email>lucas.chiesa@gmail.com</email>
- <name>Lucas Chiesa</name>
- </maintainer>
-</pkgmetadata>