diff options
Diffstat (limited to 'sci-biology/jellyfish/jellyfish-2.3.0.ebuild')
| -rw-r--r-- | sci-biology/jellyfish/jellyfish-2.3.0.ebuild | 18 |
1 files changed, 7 insertions, 11 deletions
diff --git a/sci-biology/jellyfish/jellyfish-2.3.0.ebuild b/sci-biology/jellyfish/jellyfish-2.3.0.ebuild index 6bd33a14c..2237173e0 100644 --- a/sci-biology/jellyfish/jellyfish-2.3.0.ebuild +++ b/sci-biology/jellyfish/jellyfish-2.3.0.ebuild @@ -1,12 +1,10 @@ -# Copyright 1999-2021 Gentoo Authors +# Copyright 1999-2023 Gentoo Authors # Distributed under the terms of the GNU General Public License v2 -EAPI=7 - -inherit flag-o-matic autotools +EAPI=8 DESCRIPTION="k-mer counter within reads for assemblies" -HOMEPAGE="http://www.genome.umd.edu/jellyfish.html" +HOMEPAGE="https://genome.umd.edu/jellyfish.html" SRC_URI="https://github.com/gmarcais/Jellyfish/releases/download/v${PV}/${P}.tar.gz" # older version is hidden in trinityrnaseq_r20140413p1/trinity-plugins/jellyfish-1.1.11 @@ -16,15 +14,13 @@ SLOT="2" KEYWORDS="~amd64 ~x86" IUSE="cpu_flags_x86_sse" -DEPEND="" +RDEPEND=" + sci-biology/samtools:0 + sci-libs/htslib +" DEPEND="${RDEPEND}" BDEPEND="virtual/pkgconfig" -src_prepare(){ - eautoreconf - default -} - # TODO: enable compilation of Bindings to Ruby, Python and Perl # '--enable-ruby-binding', '--enable-python-binding' or '--enable-perl-binding', '--enable-swig' src_configure(){ |