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Diffstat (limited to 'sci-biology/karect/karect-1.0.0.ebuild')
-rw-r--r-- | sci-biology/karect/karect-1.0.0.ebuild | 33 |
1 files changed, 33 insertions, 0 deletions
diff --git a/sci-biology/karect/karect-1.0.0.ebuild b/sci-biology/karect/karect-1.0.0.ebuild new file mode 100644 index 000000000..91899101e --- /dev/null +++ b/sci-biology/karect/karect-1.0.0.ebuild @@ -0,0 +1,33 @@ +# Copyright 1999-2016 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Id$ + +EAPI=5 + +inherit toolchain-funcs + +DESCRIPTION="Correct mismatches and indels of raw reads incl. paired-end" +HOMEPAGE="https://github.com/aminallam/karect + http://bioinformatics.oxfordjournals.org/content/31/21/3421.abstract" +SRC_URI="https://codeload.github.com/aminallam/karect/legacy.tar.gz/master -> karect-1.0.0.tar.gz" +# actually fetches aminallam-karect-v1.0-0-gba3ad54.tar.gz +# https://github.com/aminallam/karect.git + +LICENSE="GPL-2" +SLOT="0" +KEYWORDS="~amd64" +IUSE="" + +DEPEND="" +RDEPEND="${DEPEND}" + +S="${WORKDIR}"/aminallam-karect-ba3ad54/ + +src_compile(){ + $(tc-getCXX) ${CXXFLAGS} -pthread -lpthread karect.cpp -o karect || die +} + +src_install(){ + dobin karect + dodoc karect_manual.pdf README README.md +} |