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Diffstat (limited to 'sci-biology/manatee-jcvi')
-rw-r--r--sci-biology/manatee-jcvi/Manifest1
-rw-r--r--sci-biology/manatee-jcvi/manatee-jcvi-2.4.3.ebuild54
-rw-r--r--sci-biology/manatee-jcvi/metadata.xml15
3 files changed, 0 insertions, 70 deletions
diff --git a/sci-biology/manatee-jcvi/Manifest b/sci-biology/manatee-jcvi/Manifest
deleted file mode 100644
index 9efd473f9..000000000
--- a/sci-biology/manatee-jcvi/Manifest
+++ /dev/null
@@ -1 +0,0 @@
-DIST manatee-2.4.3.tgz 1840410 BLAKE2B e80b499e4a9a6fddc60851e1da126dc48356d675df36938f1ed1a920f19a5f76708fc4be295164ae69330d1978cebbf6e6b9c1f7c098e8049710a3e48eeee0d3 SHA512 0bfb9dff8bdaec1e602fdaa1ec6e2939cba1813ac639b95b9e2679e3473719ad74bb383ba54c56cf4dc0553eac002ea3955ae05a1bc87215c7553b9edb9f9fcf
diff --git a/sci-biology/manatee-jcvi/manatee-jcvi-2.4.3.ebuild b/sci-biology/manatee-jcvi/manatee-jcvi-2.4.3.ebuild
deleted file mode 100644
index 7bc28decf..000000000
--- a/sci-biology/manatee-jcvi/manatee-jcvi-2.4.3.ebuild
+++ /dev/null
@@ -1,54 +0,0 @@
-# Copyright 1999-2021 Gentoo Authors
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=7
-
-DESCRIPTION="Genome annotation tool"
-HOMEPAGE="http://manatee.sourceforge.net/jcvi/downloads.shtml"
-SRC_URI="http://downloads.sourceforge.net/project/manatee/manatee/manatee-${PV}/manatee-2.4.3.tgz"
-
-LICENSE="Artistic-Manatee"
-SLOT="0"
-KEYWORDS=""
-
-DEPEND=">=dev-libs/expat-1.95.8
- >=media-libs/gd-2.0.34
- dev-perl/DBI
- dev-perl/DBD-mysql
- dev-perl/XML-Parser
- dev-perl/XML-Twig
- dev-perl/XML-Simple
- dev-perl/XML-Writer
- dev-perl/HTML-Template
- dev-perl/Tree-DAG_Node
- virtual/perl-File-Spec
- virtual/perl-Data-Dumper
- dev-perl/GD
- virtual/perl-Storable
- dev-perl/Log-Log4perl
- dev-perl/Log-Cabin
- dev-perl/IO-Tee
- dev-perl/MLDBM
- dev-perl/CGI
- dev-perl/DBI
- dev-perl/Apache-DBI
- dev-perl/Date-Manip
-"
-# dev-perl/CGI-Carp
-# dev-perl/CGI-Cookie
-# dev-perl/GD-Text
-# dev-perl/GD-Graph
-#
-RDEPEND="${DEPEND}
- >=virtual/mysql-5:*
- >=www-servers/apache-2.2"
-
-S="${WORKDIR}"/manatee-"${PV}"
-
-src_configure(){
- econf HTTPD=/usr/sbin/httpd HTTPD_SCRIPT_HOME=/var/www/cgi-bin HTTPD_DOC_HOME=/var/www/htdocs MYSQLD=/usr/sbin/mysqld
-}
-
-src_compile(){
- default
-}
diff --git a/sci-biology/manatee-jcvi/metadata.xml b/sci-biology/manatee-jcvi/metadata.xml
deleted file mode 100644
index 0f267b755..000000000
--- a/sci-biology/manatee-jcvi/metadata.xml
+++ /dev/null
@@ -1,15 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="sourceforge">downloads</remote-id>
- </upstream>
-</pkgmetadata>