diff options
Diffstat (limited to 'sci-biology/ncbi-tools++/files/ncbi-tools++-12.0.0-as-needed.patch')
| -rw-r--r-- | sci-biology/ncbi-tools++/files/ncbi-tools++-12.0.0-as-needed.patch | 1864 |
1 files changed, 1864 insertions, 0 deletions
diff --git a/sci-biology/ncbi-tools++/files/ncbi-tools++-12.0.0-as-needed.patch b/sci-biology/ncbi-tools++/files/ncbi-tools++-12.0.0-as-needed.patch new file mode 100644 index 000000000..821380023 --- /dev/null +++ b/sci-biology/ncbi-tools++/files/ncbi-tools++-12.0.0-as-needed.patch @@ -0,0 +1,1864 @@ + src/algo/align/contig_assembly/Makefile.xalgocontig_assembly.lib | 2 ++ + src/algo/align/ngalign/Makefile.xngalign.lib | 2 ++ + src/algo/align/nw/Makefile.xalgoalignnw.lib | 2 ++ + src/algo/align/prosplign/Makefile.prosplign.lib | 2 ++ + src/algo/align/splign/Makefile.xalgoalignsplign.lib | 2 ++ + src/algo/blast/api/Makefile.xblast.lib | 2 +- + src/algo/blast/blastinput/Makefile.blastinput.lib | 2 +- + src/algo/blast/core/Makefile.blast.lib | 2 ++ + src/algo/blast/dbindex/Makefile.xalgoblastdbindex.lib | 2 ++ + src/algo/blast/dbindex_search/Makefile.xalgoblastdbindex_search.lib | 2 ++ + src/algo/blast/format/Makefile.xblastformat.lib | 2 +- + src/algo/blast/gumbel_params/Makefile.gumbelparams.lib | 1 + + src/algo/cobalt/Makefile.cobalt.lib | 2 ++ + src/algo/dustmask/Makefile.xalgodustmask.lib | 1 + + src/algo/gnomon/Makefile.gnomon.lib | 2 +- + src/algo/ms/formats/pepxml/Makefile.pepXML.lib | 2 ++ + src/algo/ms/omssa/Makefile.xomssa.lib | 2 ++ + src/algo/phy_tree/Makefile.xalgophytree.lib | 2 +- + src/algo/phy_tree/phytree_format/Makefile.phytreeformat.lib | 2 ++ + src/algo/segmask/Makefile.xalgosegmask.lib | 1 + + src/algo/seqqa/Makefile.xalgoseqqa.lib | 2 ++ + src/algo/sequence/Makefile.xalgoseq.lib | 2 ++ + src/algo/structure/bma_refine/Makefile.xbma_refiner.lib | 3 +++ + src/algo/structure/cd_utils/Makefile.xcd_utils.lib | 2 +- + src/algo/structure/struct_dp/Makefile.xstruct_dp.lib | 2 ++ + src/algo/structure/struct_util/Makefile.xstruct_util.lib | 2 ++ + src/algo/structure/threader/Makefile.xstruct_thread.lib | 2 ++ + src/algo/text/Makefile.xalgotext.lib | 2 ++ + src/algo/volume_merge/Makefile.xalgovmerge.lib | 2 ++ + src/algo/winmask/Makefile.xalgowinmask.lib | 2 ++ + src/cgi/Makefile.cgi.lib | 2 ++ + src/cgi/Makefile.fcgi.lib | 2 ++ + src/connect/Makefile.connssl.lib | 2 ++ + src/connect/Makefile.xconnect.lib | 4 ++++ + src/connect/Makefile.xthrserv.lib | 2 +- + src/connect/Makefile.xxconnect.lib | 2 ++ + src/connect/services/Makefile.ncbi_xcache_netcache.lib | 2 +- + src/connect/services/Makefile.xconnserv.lib | 2 +- + src/connect/test/Makefile.conntest.lib | 2 ++ + src/corelib/Makefile.test_boost.lib | 2 ++ + src/corelib/Makefile.test_mt.lib | 2 ++ + src/corelib/test/Makefile.pbacktest.lib | 2 ++ + src/db/bdb/Makefile.bdb.lib | 4 ++++ + src/db/bdb/Makefile.ncbi_xcache_bdb.lib | 2 +- + src/db/sqlite/Makefile.sqlitewrapp.lib | 3 +++ + src/dbapi/Makefile.dbapi.lib | 5 +++++ + src/dbapi/driver/Makefile.dbapi_driver.lib | 2 ++ + src/dbapi/driver/samples/Makefile.dbapi_sample_base.lib | 2 ++ + src/dbapi/lang_bind/python/Makefile.python_ncbi_dbapi.lib | 2 +- + src/dbapi/simple/Makefile.sdbapi.lib | 1 + + src/html/Makefile.html.lib | 2 ++ + src/misc/cgi_redirect/Makefile.cgi_redirect.lib | 2 ++ + src/misc/grid_cgi/Makefile.xgridcgi.lib | 2 ++ + src/objects/access/Makefile.access.lib | 1 + + src/objects/biblio/Makefile.biblio.lib | 2 ++ + src/objects/biotree/Makefile.biotree.lib | 2 ++ + src/objects/blast/Makefile.blast.lib | 2 ++ + src/objects/blast/Makefile.xnetblastcli.lib | 2 ++ + src/objects/blastdb/Makefile.blastdb.lib | 2 ++ + src/objects/blastxml/Makefile.blastxml.lib | 2 ++ + src/objects/cdd/Makefile.cdd.lib | 2 ++ + src/objects/cn3d/Makefile.cn3d.lib | 2 ++ + src/objects/docsum/Makefile.docsum.lib | 2 ++ + src/objects/entrez2/Makefile.entrez2.lib | 2 ++ + src/objects/entrez2/Makefile.entrez2cli.lib | 2 ++ + src/objects/entrezgene/Makefile.entrezgene.lib | 2 ++ + src/objects/featdef/Makefile.featdef.lib | 2 ++ + src/objects/gbseq/Makefile.gbseq.lib | 2 ++ + src/objects/general/Makefile.general.lib | 2 ++ + src/objects/genomecoll/Makefile.genome_collection.lib | 2 ++ + src/objects/homologene/Makefile.homologene.lib | 2 ++ + src/objects/id1/Makefile.id1.lib | 2 ++ + src/objects/id1/Makefile.id1cli.lib | 2 ++ + src/objects/id2/Makefile.id2.lib | 2 ++ + src/objects/id2/Makefile.id2cli.lib | 2 ++ + src/objects/insdseq/Makefile.insdseq.lib | 2 ++ + src/objects/macro/Makefile.macro.lib | 2 ++ + src/objects/medlars/Makefile.medlars.lib | 2 ++ + src/objects/medline/Makefile.medline.lib | 2 ++ + src/objects/mim/Makefile.mim.lib | 2 ++ + src/objects/mla/Makefile.mla.lib | 2 ++ + src/objects/mla/Makefile.mlacli.lib | 2 ++ + src/objects/mmdb/Makefile.mmdb.lib | 2 ++ + src/objects/ncbimime/Makefile.ncbimime.lib | 2 ++ + src/objects/objprt/Makefile.objprt.lib | 2 ++ + src/objects/omssa/Makefile.omssa.lib | 2 ++ + src/objects/pcassay/Makefile.pcassay.lib | 2 ++ + src/objects/pcsubstance/Makefile.pcsubstance.lib | 2 ++ + src/objects/proj/Makefile.proj.lib | 2 ++ + src/objects/pub/Makefile.pub.lib | 2 ++ + src/objects/pubmed/Makefile.pubmed.lib | 2 ++ + src/objects/remap/Makefile.remap.lib | 2 ++ + src/objects/remap/Makefile.remapcli.lib | 2 ++ + src/objects/scoremat/Makefile.scoremat.lib | 2 ++ + src/objects/seq/Makefile.seq.lib | 2 ++ + src/objects/seqcode/Makefile.seqcode.lib | 2 ++ + src/objects/seqedit/Makefile.seqedit.lib | 1 + + src/objects/seqset/Makefile.seqset.lib | 1 + + src/objects/seqsplit/Makefile.seqsplit.lib | 2 ++ + src/objects/seqtest/Makefile.seqtest.lib | 2 ++ + src/objects/submit/Makefile.submit.lib | 1 + + src/objects/taxon1/Makefile.taxon1.lib | 2 ++ + src/objects/taxon3/Makefile.taxon3.lib | 2 ++ + src/objects/tinyseq/Makefile.tinyseq.lib | 2 ++ + src/objects/valerr/Makefile.valerr.lib | 2 ++ + src/objects/valid/Makefile.valid.lib | 2 ++ + src/objects/variation/Makefile.variation.lib | 1 + + src/objmgr/split/Makefile.id2_split.lib | 2 +- + src/objmgr/util/Makefile.util.lib | 1 + + src/objtools/align/Makefile.xalntool.lib | 2 ++ + src/objtools/align_format/Makefile.align_format.lib | 2 ++ + src/objtools/alnmgr/Makefile.alnmgr.lib | 1 + + src/objtools/blast/blastdb_format/Makefile.blastdb_format.lib | 2 ++ + src/objtools/blast/gene_info_reader/Makefile.gene_info.lib | 2 ++ + src/objtools/blast/gene_info_writer/Makefile.gene_info_writer.lib | 2 ++ + src/objtools/blast/seqdb_reader/Makefile.seqdb.lib | 2 ++ + src/objtools/blast/seqdb_writer/Makefile.writedb.lib | 2 ++ + src/objtools/blast/services/Makefile.blast_services.lib | 1 + + src/objtools/cddalignview/Makefile.cddalignview.lib | 2 ++ + src/objtools/cleanup/Makefile.cleanup.lib | 2 +- + src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb.lib | 3 +++ + .../data_loaders/blastdb/Makefile.ncbi_xloader_blastdb_rmt.lib | 2 ++ + src/objtools/data_loaders/cdd/Makefile.ncbi_xloader_cdd.lib | 2 ++ + src/objtools/data_loaders/genbank/Makefile.ncbi_xreader.lib | 2 +- + src/objtools/data_loaders/genbank/id2/Makefile.ncbi_xreader_id2.lib | 2 ++ + src/objtools/data_loaders/patcher/Makefile.ncbi_xloader_patcher.lib | 2 ++ + src/objtools/data_loaders/trace/Makefile.xloader_trace.lib | 2 ++ + src/objtools/edit/Makefile.edit.lib | 2 ++ + src/objtools/eutils/api/Makefile.eutils.lib | 2 ++ + src/objtools/eutils/egquery/Makefile.egquery.lib | 2 ++ + src/objtools/eutils/ehistory/Makefile.ehistory.lib | 2 ++ + src/objtools/eutils/einfo/Makefile.einfo.lib | 2 ++ + src/objtools/eutils/elink/Makefile.elink.lib | 2 ++ + src/objtools/eutils/epost/Makefile.epost.lib | 2 ++ + src/objtools/eutils/esearch/Makefile.esearch.lib | 2 ++ + src/objtools/eutils/espell/Makefile.espell.lib | 2 ++ + src/objtools/eutils/esummary/Makefile.esummary.lib | 2 ++ + src/objtools/eutils/linkout/Makefile.linkout.lib | 2 ++ + src/objtools/eutils/uilist/Makefile.uilist.lib | 2 ++ + src/objtools/format/Makefile.xformat.lib | 2 ++ + src/objtools/lds/Makefile.lds.lib | 2 +- + src/objtools/manip/Makefile.xobjmanip.lib | 2 ++ + src/objtools/readers/Makefile.xobjread.lib | 3 +-- + src/objtools/readers/Makefile.xobjreadex.lib | 2 +- + src/objtools/seqmasks_io/Makefile.seqmasks_io.lib | 2 +- + src/objtools/simple/Makefile.xobjsimple.lib | 1 + + src/objtools/snputil/Makefile.snputil.lib | 2 ++ + src/objtools/validator/Makefile.validator.lib | 2 ++ + src/objtools/writers/Makefile.xobjwrite.lib | 1 + + src/sample/app/asn/Makefile.sample_asn.lib | 2 ++ + src/sample/app/soap/Makefile.soap_dataobj.lib | 2 ++ + src/sample/lib/asn_lib/Makefile.asn_sample_lib.lib | 2 ++ + src/sample/lib/basic/Makefile.basic_sample_lib.lib | 2 ++ + src/sample/lib/dtd/Makefile.dtd_sample_lib.lib | 2 ++ + src/sample/lib/xsd/Makefile.xsd_sample_lib.lib | 2 ++ + src/serial/Makefile.serial.lib | 2 ++ + src/serial/soap/Makefile.soap.lib | 2 ++ + src/serial/soap/Makefile.soap_server.lib | 2 ++ + src/serial/test/Makefile.we_cpp.lib | 1 + + src/sra/data_loaders/bam/Makefile.ncbi_xloader_bam.lib | 2 +- + src/sra/sdk/libs/align/Makefile.align-writer.lib | 2 +- + src/util/Makefile.util.lib | 2 ++ + src/util/compress/api/Makefile.compress.lib | 2 +- + src/util/qparse/Makefile.xqueryparse.lib | 2 ++ + src/util/regexp/Makefile.regexp.lib | 2 ++ + src/util/sequtil/Makefile.sequtil.lib | 2 ++ + src/util/xregexp/Makefile.xregexp.lib | 2 +- + 167 files changed, 307 insertions(+), 23 deletions(-) + +diff --git a/src/algo/align/contig_assembly/Makefile.xalgocontig_assembly.lib b/src/algo/align/contig_assembly/Makefile.xalgocontig_assembly.lib +index c8851d8..35ae629 100644 +--- a/src/algo/align/contig_assembly/Makefile.xalgocontig_assembly.lib ++++ b/src/algo/align/contig_assembly/Makefile.xalgocontig_assembly.lib +@@ -10,3 +10,5 @@ LIB = xalgocontig_assembly + + CXXFLAGS = $(FAST_CXXFLAGS) + LDFLAGS = $(FAST_LDFLAGS) ++ ++DLL_LIB = align_format blastinput dbapi_driver seq xalgoalignnw xalgodustmask xalnmgr xblast xncbi xobjmgr xobjutil xser # axf +diff --git a/src/algo/align/ngalign/Makefile.xngalign.lib b/src/algo/align/ngalign/Makefile.xngalign.lib +index d163f7c..ade88ce 100644 +--- a/src/algo/align/ngalign/Makefile.xngalign.lib ++++ b/src/algo/align/ngalign/Makefile.xngalign.lib +@@ -15,3 +15,5 @@ LIB = xngalign + + CXXFLAGS = $(FAST_CXXFLAGS) -I./. + LDFLAGS = $(FAST_LDFLAGS) ++ ++DLL_LIB = seq xalgoalignutil xncbi blastinput xalgoalignnw align_format xcgi ncbi_xloader_genbank ncbi_xreader ncbi_xreader_id2 +diff --git a/src/algo/align/nw/Makefile.xalgoalignnw.lib b/src/algo/align/nw/Makefile.xalgoalignnw.lib +index acc1ddf..acba81c 100644 +--- a/src/algo/align/nw/Makefile.xalgoalignnw.lib ++++ b/src/algo/align/nw/Makefile.xalgoalignnw.lib +@@ -15,3 +15,5 @@ CXXFLAGS = $(FAST_CXXFLAGS) + LDFLAGS = $(FAST_LDFLAGS) + + WATCHERS = kiryutin ++ ++DLL_LIB = access align_format dbapi_driver general seq writedb xncbi xser # axf +diff --git a/src/algo/align/prosplign/Makefile.prosplign.lib b/src/algo/align/prosplign/Makefile.prosplign.lib +index 248ee37..73143ad 100644 +--- a/src/algo/align/prosplign/Makefile.prosplign.lib ++++ b/src/algo/align/prosplign/Makefile.prosplign.lib +@@ -10,3 +10,5 @@ LIB = prosplign + + CXXFLAGS = $(FAST_CXXFLAGS) + LDFLAGS = $(FAST_LDFLAGS) ++ ++DLL_LIB = align_format blastinput dbapi_driver general igblast seq xalgoalignutil xalnmgr xncbi xobjmgr xobjutil xser # axf +diff --git a/src/algo/align/splign/Makefile.xalgoalignsplign.lib b/src/algo/align/splign/Makefile.xalgoalignsplign.lib +index d67680b..3d56789 100644 +--- a/src/algo/align/splign/Makefile.xalgoalignsplign.lib ++++ b/src/algo/align/splign/Makefile.xalgoalignsplign.lib +@@ -10,3 +10,5 @@ LIB = xalgoalignsplign + + CXXFLAGS = $(FAST_CXXFLAGS) + LDFLAGS = $(FAST_LDFLAGS) ++ ++DLL_LIB = access align_format blastinput dbapi_driver gene_info general seq seqdb xalgoalignnw xalgoalignutil xalgoseq xblast xncbi xobjmgr xobjutil xser xutil # axf prosplign +diff --git a/src/algo/blast/api/Makefile.xblast.lib b/src/algo/blast/api/Makefile.xblast.lib +index 073973b..c6a4c2c 100644 +--- a/src/algo/blast/api/Makefile.xblast.lib ++++ b/src/algo/blast/api/Makefile.xblast.lib +@@ -78,7 +78,7 @@ SRC = $(SRC_C:%=.core_%) $(SRC_CXX) + + LIB = xblast + +-DLL_LIB = xalgodustmask xobjutil $(OBJMGR_LIBS) ++DLL_LIB = xalgodustmask xobjutil $(OBJMGR_LIBS) seqdb xnetblast xnetblastcli xalgoblastdbindex xalgowinmask tables composition_adjustment xobjread + + CFLAGS = $(FAST_CFLAGS) + # Strict gcc flags +diff --git a/src/algo/blast/blastinput/Makefile.blastinput.lib b/src/algo/blast/blastinput/Makefile.blastinput.lib +index bfb315c..2cd809a 100644 +--- a/src/algo/blast/blastinput/Makefile.blastinput.lib ++++ b/src/algo/blast/blastinput/Makefile.blastinput.lib +@@ -24,7 +24,7 @@ SRC = $(SRC_CXX) + + LIB = blastinput + +-DLL_LIB = xblast $(OBJMGR_LIBS) ++DLL_LIB = seqdb ncbi_xloader_blastdb ncbi_xloader_blastdb_rmt align_format xalnmgr xblast xcgi xobjread xobjutil ncbi_xloader_genbank ncbi_xreader ncbi_xreader_id2 xalnmgr xcgi + + # should be redundant, given the above :-/ + ASN_DEP = seqset xnetblast +diff --git a/src/algo/blast/core/Makefile.blast.lib b/src/algo/blast/core/Makefile.blast.lib +index 8e889a7..1326aee 100644 +--- a/src/algo/blast/core/Makefile.blast.lib ++++ b/src/algo/blast/core/Makefile.blast.lib +@@ -23,3 +23,5 @@ LDFLAGS = $(FAST_LDFLAGS) + + + WATCHERS = coulouri maning madden camacho ++ ++DLL_LIB = xutil +diff --git a/src/algo/blast/dbindex/Makefile.xalgoblastdbindex.lib b/src/algo/blast/dbindex/Makefile.xalgoblastdbindex.lib +index fcfb9f9..0e762b4 100644 +--- a/src/algo/blast/dbindex/Makefile.xalgoblastdbindex.lib ++++ b/src/algo/blast/dbindex/Makefile.xalgoblastdbindex.lib +@@ -14,3 +14,5 @@ LDFLAGS = $(FAST_LDFLAGS) + ASN_DEP = seqset + + WATCHERS = morgulis ++ ++DLL_LIB = dbapi_driver seq seqdb seqset xncbi xobjmgr xobjread xobjutil xser xutil # axf +diff --git a/src/algo/blast/dbindex_search/Makefile.xalgoblastdbindex_search.lib b/src/algo/blast/dbindex_search/Makefile.xalgoblastdbindex_search.lib +index e64f111..475f4a1 100644 +--- a/src/algo/blast/dbindex_search/Makefile.xalgoblastdbindex_search.lib ++++ b/src/algo/blast/dbindex_search/Makefile.xalgoblastdbindex_search.lib +@@ -10,3 +10,5 @@ LDFLAGS = $(FAST_LDFLAGS) + ASN_DEP = seqset + + WATCHERS = morgulis ++ ++DLL_LIB = dbapi_driver xncbi xobjmgr # axf +diff --git a/src/algo/blast/format/Makefile.xblastformat.lib b/src/algo/blast/format/Makefile.xblastformat.lib +index f7da067..9920332 100644 +--- a/src/algo/blast/format/Makefile.xblastformat.lib ++++ b/src/algo/blast/format/Makefile.xblastformat.lib +@@ -7,6 +7,6 @@ SRC = blastfmtutil blastxml_format blast_format data4xmlformat build_archive vec + + CPPFLAGS = $(ORIG_CPPFLAGS) + +-DLL_LIB = blastxml xhtml xcgi ++DLL_LIB = blastxml xhtml xcgi align_format general scoremat seq seqdb xalnmgr xblast xnetblast xobjmgr xobjutil blast_services ncbi_xloader_genbank xcgi # cobalt + + WATCHERS = jianye zaretska madden camacho fongah2 +diff --git a/src/algo/blast/gumbel_params/Makefile.gumbelparams.lib b/src/algo/blast/gumbel_params/Makefile.gumbelparams.lib +index 316d4fa..844de85 100644 +--- a/src/algo/blast/gumbel_params/Makefile.gumbelparams.lib ++++ b/src/algo/blast/gumbel_params/Makefile.gumbelparams.lib +@@ -11,3 +11,4 @@ LDFLAGS = $(FAST_LDFLAGS) + + WATCHERS = boratyng madden camacho + ++DLL_LIB = dbapi_driver xncbi xutil # axf +diff --git a/src/algo/cobalt/Makefile.cobalt.lib b/src/algo/cobalt/Makefile.cobalt.lib +index e618f67..b406cc5 100644 +--- a/src/algo/cobalt/Makefile.cobalt.lib ++++ b/src/algo/cobalt/Makefile.cobalt.lib +@@ -14,3 +14,5 @@ ASN_DEP = seq seqset biotree xnetblast blastdb + + CXXFLAGS = $(FAST_CXXFLAGS) + LDFLAGS = $(FAST_LDFLAGS) ++ ++DLL_LIB = align_format dbapi_driver general igblast seq seqdb seqset xalgoalignnw xalgophytree xblast xncbi xnetblast xobjmgr xobjutil xser fastme # axf +diff --git a/src/algo/dustmask/Makefile.xalgodustmask.lib b/src/algo/dustmask/Makefile.xalgodustmask.lib +index 84e2568..3632356 100644 +--- a/src/algo/dustmask/Makefile.xalgodustmask.lib ++++ b/src/algo/dustmask/Makefile.xalgodustmask.lib +@@ -11,3 +11,4 @@ SRC = symdust + CXXFLAGS = $(FAST_CXXFLAGS) + LDFLAGS = $(FAST_LDFLAGS) + ++DLL_LIB = dbapi_driver seq xncbi xobjmgr # axf +diff --git a/src/algo/gnomon/Makefile.gnomon.lib b/src/algo/gnomon/Makefile.gnomon.lib +index af363c0..3235647 100644 +--- a/src/algo/gnomon/Makefile.gnomon.lib ++++ b/src/algo/gnomon/Makefile.gnomon.lib +@@ -6,7 +6,7 @@ SRC = $(ASN:%=%__) $(ASN:%=%___) \ + gnomon_engine gnomon_objmgr score gnomon_model parse hmm gnomon_seq asn1 chainer id_handler \ + annot select_alignments_alt + LIB = xalgognomon +-DLL_LIB = xobjutil $(SOBJMGR_LIBS) ++DLL_LIB = xobjutil $(SOBJMGR_LIBS) xalgoseq + + CXXFLAGS = $(FAST_CXXFLAGS) + LDFLAGS = $(FAST_LDFLAGS) +diff --git a/src/algo/ms/formats/pepxml/Makefile.pepXML.lib b/src/algo/ms/formats/pepxml/Makefile.pepXML.lib +index 686dd70..98f57b2 100644 +--- a/src/algo/ms/formats/pepxml/Makefile.pepXML.lib ++++ b/src/algo/ms/formats/pepxml/Makefile.pepXML.lib +@@ -2,3 +2,5 @@ WATCHERS = lewisg slottad + + LIB = pepXML + SRC = pepXML__ pepXML___ ++ ++DLL_LIB = access align_format dbapi_driver xncbi xser # axf +diff --git a/src/algo/ms/omssa/Makefile.xomssa.lib b/src/algo/ms/omssa/Makefile.xomssa.lib +index 872b92e..78261eb 100644 +--- a/src/algo/ms/omssa/Makefile.xomssa.lib ++++ b/src/algo/ms/omssa/Makefile.xomssa.lib +@@ -19,3 +19,5 @@ LIB = xomssa + CFLAGS = $(FAST_CFLAGS) + CXXFLAGS = $(FAST_CXXFLAGS) + LDFLAGS = $(FAST_LDFLAGS) ++ ++DLL_LIB = xutil omssa pepXML xcompress xconnect seqdb xblast xregexp +diff --git a/src/algo/phy_tree/Makefile.xalgophytree.lib b/src/algo/phy_tree/Makefile.xalgophytree.lib +index 5964ef4..8163366 100644 +--- a/src/algo/phy_tree/Makefile.xalgophytree.lib ++++ b/src/algo/phy_tree/Makefile.xalgophytree.lib +@@ -6,7 +6,7 @@ ASN_DEP = biotree + + SRC = bio_tree phy_node dist_methods lex.newick newick.tab tree_to_dist_mat phytree_calc + LIB = xalgophytree +-DLL_LIB = biotree ++DLL_LIB = biotree seq xalnmgr xobjutil # fastme + + # The -I flag is necessary because filenames in #line directives throw + # off some compilers (GCC 2.95 at least). :-/ +diff --git a/src/algo/phy_tree/phytree_format/Makefile.phytreeformat.lib b/src/algo/phy_tree/phytree_format/Makefile.phytreeformat.lib +index 15d7440..fab9207 100644 +--- a/src/algo/phy_tree/phytree_format/Makefile.phytreeformat.lib ++++ b/src/algo/phy_tree/phytree_format/Makefile.phytreeformat.lib +@@ -10,3 +10,5 @@ CPPFLAGS = $(ORIG_CPPFLAGS) + ASN_DEP = biotree seqset taxon1 + + WATCHERS = boratyng ++ ++DLL_LIB = access align_format biotree dbapi_driver fastme gene_info seq taxon1 xalgophytree xncbi xobjmgr xobjutil xser # axf +diff --git a/src/algo/segmask/Makefile.xalgosegmask.lib b/src/algo/segmask/Makefile.xalgosegmask.lib +index bd011c1..97281ec 100644 +--- a/src/algo/segmask/Makefile.xalgosegmask.lib ++++ b/src/algo/segmask/Makefile.xalgosegmask.lib +@@ -11,3 +11,4 @@ SRC = segmask + CXXFLAGS = $(FAST_CXXFLAGS) + LDFLAGS = $(FAST_LDFLAGS) + ++DLL_LIB = align_format xobjmgr +diff --git a/src/algo/seqqa/Makefile.xalgoseqqa.lib b/src/algo/seqqa/Makefile.xalgoseqqa.lib +index b1bea47..a0e5b1b 100644 +--- a/src/algo/seqqa/Makefile.xalgoseqqa.lib ++++ b/src/algo/seqqa/Makefile.xalgoseqqa.lib +@@ -12,3 +12,5 @@ LIB = xalgoseqqa + CXXFLAGS = $(FAST_CXXFLAGS) + LDFLAGS = $(FAST_LDFLAGS) + CPPFLAGS = $(ORIG_CPPFLAGS) $(PCRE_INCLUDE) ++ ++DLL_LIB = access align_format dbapi_driver entrez2cli gene_info general seq seqtest xalgognomon xalgoseq xalnmgr xncbi xobjmgr xobjutil xser # axf +diff --git a/src/algo/sequence/Makefile.xalgoseq.lib b/src/algo/sequence/Makefile.xalgoseq.lib +index 51f4cd7..724e939 100644 +--- a/src/algo/sequence/Makefile.xalgoseq.lib ++++ b/src/algo/sequence/Makefile.xalgoseq.lib +@@ -13,3 +13,5 @@ LDFLAGS = $(FAST_LDFLAGS) + CPPFLAGS = $(ORIG_CPPFLAGS) $(PCRE_INCLUDE) + + WATCHERS = dicuccio ++ ++DLL_LIB = taxon1 xalnmgr xregexp align_format seqset xobjmgr xobjutil +diff --git a/src/algo/structure/bma_refine/Makefile.xbma_refiner.lib b/src/algo/structure/bma_refine/Makefile.xbma_refiner.lib +index 5562f82..68d3a87 100644 +--- a/src/algo/structure/bma_refine/Makefile.xbma_refiner.lib ++++ b/src/algo/structure/bma_refine/Makefile.xbma_refiner.lib +@@ -24,3 +24,6 @@ SRC = RowSelector \ + RefinerTrial \ + RefinerEngine \ + Interface ++ ++DLL_LIB = blastinput cdd ncbi_xcache_bdb xcd_utils xncbi xser xutil ++ +diff --git a/src/algo/structure/cd_utils/Makefile.xcd_utils.lib b/src/algo/structure/cd_utils/Makefile.xcd_utils.lib +index eda71f8..8d3a96a 100644 +--- a/src/algo/structure/cd_utils/Makefile.xcd_utils.lib ++++ b/src/algo/structure/cd_utils/Makefile.xcd_utils.lib +@@ -68,6 +68,6 @@ SRC = \ + cuTaxTree \ + cuUtils + +-DLL_LIB = xobjread ++DLL_LIB = xobjread blastdb blast_services cdd entrez2cli id1cli mmdb ncbimime scoremat taxon1 xblast xobjmgr xregexp + + CPPFLAGS = $(ORIG_CPPFLAGS) +diff --git a/src/algo/structure/struct_dp/Makefile.xstruct_dp.lib b/src/algo/structure/struct_dp/Makefile.xstruct_dp.lib +index 676a8dd..3d3e4c9 100644 +--- a/src/algo/structure/struct_dp/Makefile.xstruct_dp.lib ++++ b/src/algo/structure/struct_dp/Makefile.xstruct_dp.lib +@@ -9,3 +9,5 @@ WATCHERS = thiessen + SRC = block_align + + LIB = xstruct_dp ++ ++DLL_LIB = xncbi +diff --git a/src/algo/structure/struct_util/Makefile.xstruct_util.lib b/src/algo/structure/struct_util/Makefile.xstruct_util.lib +index 5a38c7d..35d7077 100644 +--- a/src/algo/structure/struct_util/Makefile.xstruct_util.lib ++++ b/src/algo/structure/struct_util/Makefile.xstruct_util.lib +@@ -17,3 +17,5 @@ SRC = aaa_dummy_pch \ + su_block_multiple_alignment \ + su_pssm \ + su_sequence_set ++ ++DLL_LIB = seqset seq xncbi scoremat xstruct_dp xblast +diff --git a/src/algo/structure/threader/Makefile.xstruct_thread.lib b/src/algo/structure/threader/Makefile.xstruct_thread.lib +index c06a2c0..9f1ff25 100644 +--- a/src/algo/structure/threader/Makefile.xstruct_thread.lib ++++ b/src/algo/structure/threader/Makefile.xstruct_thread.lib +@@ -10,3 +10,5 @@ SRC = thrdalgs thrdatd thrdbwfi thrdcpal thrdcpll thrdcprl \ + thrdttbi thrdzsc + + LIB = xstruct_thread ++ ++DLL_LIB = xutil +diff --git a/src/algo/text/Makefile.xalgotext.lib b/src/algo/text/Makefile.xalgotext.lib +index 81ba0e6..f25073e 100644 +--- a/src/algo/text/Makefile.xalgotext.lib ++++ b/src/algo/text/Makefile.xalgotext.lib +@@ -10,3 +10,5 @@ CXXFLAGS = $(FAST_CXXFLAGS) + LDFLAGS = $(FAST_LDFLAGS) + + ASN_DEP = general ++ ++DLL_LIB = align_format blastinput ncbi_xcache_bdb xcompress xncbi xutil # axf +diff --git a/src/algo/volume_merge/Makefile.xalgovmerge.lib b/src/algo/volume_merge/Makefile.xalgovmerge.lib +index 499861a..3ffb80b 100644 +--- a/src/algo/volume_merge/Makefile.xalgovmerge.lib ++++ b/src/algo/volume_merge/Makefile.xalgovmerge.lib +@@ -10,3 +10,5 @@ SRC = volume_merge + CXXFLAGS = $(FAST_CXXFLAGS) + LDFLAGS = $(FAST_LDFLAGS) + ++ ++DLL_LIB = xncbi +diff --git a/src/algo/winmask/Makefile.xalgowinmask.lib b/src/algo/winmask/Makefile.xalgowinmask.lib +index afaf676..ad2c1fe 100644 +--- a/src/algo/winmask/Makefile.xalgowinmask.lib ++++ b/src/algo/winmask/Makefile.xalgowinmask.lib +@@ -21,3 +21,5 @@ SRC = seq_masker seq_masker_score_mean seq_masker_score_mean_glob \ + CXXFLAGS = $(FAST_CXXFLAGS) + LDFLAGS = $(FAST_LDFLAGS) + ++DLL_LIB = seqmasks_io xobjread xobjutil ++ +diff --git a/src/cgi/Makefile.cgi.lib b/src/cgi/Makefile.cgi.lib +index a990390..edf40aa 100644 +--- a/src/cgi/Makefile.cgi.lib ++++ b/src/cgi/Makefile.cgi.lib +@@ -11,3 +11,5 @@ LIB = xcgi + CPPFLAGS = $(ORIG_CPPFLAGS) $(FASTCGI_INCLUDE) + + WATCHERS = vakatov ++ ++DLL_LIB = xncbi xutil +diff --git a/src/cgi/Makefile.fcgi.lib b/src/cgi/Makefile.fcgi.lib +index 2569b41..6b85780 100644 +--- a/src/cgi/Makefile.fcgi.lib ++++ b/src/cgi/Makefile.fcgi.lib +@@ -12,3 +12,5 @@ LIB = xfcgi + CPPFLAGS = $(ORIG_CPPFLAGS) $(FASTCGI_INCLUDE) -DNCBI_XFCGI_EXPORTS + + WATCHERS = vakatov ++ ++DLL_LIB = xncbi xutil +diff --git a/src/connect/Makefile.connssl.lib b/src/connect/Makefile.connssl.lib +index b400ca2..8756320 100644 +--- a/src/connect/Makefile.connssl.lib ++++ b/src/connect/Makefile.connssl.lib +@@ -8,3 +8,5 @@ CPPFLAGS = $(GNUTLS_INCLUDE) $(ORIG_CPPFLAGS) + LIBS = $(GNUTLS_LIBS) $(ORIG_LIBS) + + WATCHERS = lavr ++ ++DLL_LIB = connect +diff --git a/src/connect/Makefile.xconnect.lib b/src/connect/Makefile.xconnect.lib +index 473bb0b..88dae10 100644 +--- a/src/connect/Makefile.xconnect.lib ++++ b/src/connect/Makefile.xconnect.lib +@@ -11,9 +11,13 @@ include $(srcdir)/Makefile.xxconnect.lib + SRC = $(SRC_C) $(SRC_CXX) + UNIX_SRC = $(LOCAL_LBSM) + ++DLL_LIB = xncbi ++ + LIB = xconnect + PROJ_TAG = core + + LIBS = $(NETWORK_LIBS) $(ORIG_LIBS) + + WATCHERS = lavr ++ ++DLL_LIB = xncbi xutil +diff --git a/src/connect/Makefile.xthrserv.lib b/src/connect/Makefile.xthrserv.lib +index 1e5b857..0833a78 100644 +--- a/src/connect/Makefile.xthrserv.lib ++++ b/src/connect/Makefile.xthrserv.lib +@@ -4,6 +4,6 @@ SRC = threaded_server server server_monitor connection_pool + LIB = xthrserv + PROJ_TAG = core + LIBS = $(NETWORK_LIBS) +-DLL_LIB = xutil xconnect ++DLL_LIB = xncbi xutil xconnect + + WATCHERS = ivanovp +diff --git a/src/connect/Makefile.xxconnect.lib b/src/connect/Makefile.xxconnect.lib +index d7ba751..8e27819 100644 +--- a/src/connect/Makefile.xxconnect.lib ++++ b/src/connect/Makefile.xxconnect.lib +@@ -16,3 +16,5 @@ PROJ_TAG = core + LIBS = $(NETWORK_LIBS) $(ORIG_LIBS) + + WATCHERS = lavr ++ ++DLL_LIB = xncbi xutil connect +diff --git a/src/connect/services/Makefile.ncbi_xcache_netcache.lib b/src/connect/services/Makefile.ncbi_xcache_netcache.lib +index 606f4f1..e6cfdac 100644 +--- a/src/connect/services/Makefile.ncbi_xcache_netcache.lib ++++ b/src/connect/services/Makefile.ncbi_xcache_netcache.lib +@@ -6,7 +6,7 @@ SRC = neticache_client + LIB = ncbi_xcache_netcache + + LIB_OR_DLL = both +-DLL_LIB = xconnserv xconnect xutil ++DLL_LIB = xconnserv xconnect xutil xncbi + + CPPFLAGS = $(ORIG_CPPFLAGS) + LIBS = $(ORIG_LIBS) +diff --git a/src/connect/services/Makefile.xconnserv.lib b/src/connect/services/Makefile.xconnserv.lib +index 4b8f21f..04fcbf8 100644 +--- a/src/connect/services/Makefile.xconnserv.lib ++++ b/src/connect/services/Makefile.xconnserv.lib +@@ -15,6 +15,6 @@ LIB = xconnserv + PROJ_TAG = core + LIBS = $(NETWORK_LIBS) + +-DLL_LIB = xthrserv xconnect xutil ++DLL_LIB = xthrserv xconnect xutil xncbi + + WATCHERS = kazimird +diff --git a/src/connect/test/Makefile.conntest.lib b/src/connect/test/Makefile.conntest.lib +index 58a2fa5..3d9876c 100644 +--- a/src/connect/test/Makefile.conntest.lib ++++ b/src/connect/test/Makefile.conntest.lib +@@ -4,3 +4,5 @@ SRC = ncbi_conntest + LIB = xconntest + + WATCHERS = lavr ++ ++DLL_LIB = xncbi xutil connect +diff --git a/src/corelib/Makefile.test_boost.lib b/src/corelib/Makefile.test_boost.lib +index e8fa174..f90441d 100644 +--- a/src/corelib/Makefile.test_boost.lib ++++ b/src/corelib/Makefile.test_boost.lib +@@ -9,3 +9,5 @@ REQUIRES = Boost.Test.Included + + WATCHERS = ivanovp + PROJ_TAG = test ++ ++DLL_LIB = xncbi +diff --git a/src/corelib/Makefile.test_mt.lib b/src/corelib/Makefile.test_mt.lib +index 6153eab..f64c3a2 100644 +--- a/src/corelib/Makefile.test_mt.lib ++++ b/src/corelib/Makefile.test_mt.lib +@@ -8,3 +8,5 @@ LIB = test_mt + USE_PCH = no + WATCHERS = grichenk + PROJ_TAG = test ++ ++DLL_LIB = xncbi +diff --git a/src/corelib/test/Makefile.pbacktest.lib b/src/corelib/test/Makefile.pbacktest.lib +index da0c616..c4c62ab 100644 +--- a/src/corelib/test/Makefile.pbacktest.lib ++++ b/src/corelib/test/Makefile.pbacktest.lib +@@ -4,3 +4,5 @@ SRC = pbacktest + LIB = xpbacktest + + WATCHERS = lavr ++ ++DLL_LIB = xncbi +diff --git a/src/db/bdb/Makefile.bdb.lib b/src/db/bdb/Makefile.bdb.lib +index 3729707..cd2827c 100644 +--- a/src/db/bdb/Makefile.bdb.lib ++++ b/src/db/bdb/Makefile.bdb.lib +@@ -14,3 +14,7 @@ LIB = bdb + CPPFLAGS = $(ORIG_CPPFLAGS) $(BERKELEYDB_INCLUDE) + + WATCHERS = kuznets ++ ++DLL_LIB = xncbi xutil ++LIBS = $(BERKELEYDB_LIBS) ++ +diff --git a/src/db/bdb/Makefile.ncbi_xcache_bdb.lib b/src/db/bdb/Makefile.ncbi_xcache_bdb.lib +index 7e97a26..8f54efc 100644 +--- a/src/db/bdb/Makefile.ncbi_xcache_bdb.lib ++++ b/src/db/bdb/Makefile.ncbi_xcache_bdb.lib +@@ -8,7 +8,7 @@ SRC = bdb_blobcache + LIB = ncbi_xcache_bdb + + LIB_OR_DLL = both +-DLL_LIB = bdb xutil ++DLL_LIB = bdb xutil xncbi + + CPPFLAGS = $(ORIG_CPPFLAGS) $(BERKELEYDB_INCLUDE) + LIBS = $(BERKELEYDB_LIBS) $(ORIG_LIBS) +diff --git a/src/db/sqlite/Makefile.sqlitewrapp.lib b/src/db/sqlite/Makefile.sqlitewrapp.lib +index cecfd16..c01668b 100644 +--- a/src/db/sqlite/Makefile.sqlitewrapp.lib ++++ b/src/db/sqlite/Makefile.sqlitewrapp.lib +@@ -8,3 +8,6 @@ CPPFLAGS= $(ORIG_CPPFLAGS) $(SQLITE3_INCLUDE) + REQUIRES = SQLITE3 + + WATCHERS = ivanovp ++ ++DLL_LIB = xncbi xutil ++LIBS = $(SQLITE3_LIBS) +diff --git a/src/dbapi/Makefile.dbapi.lib b/src/dbapi/Makefile.dbapi.lib +index 6e3ad4c..e3d6a49 100644 +--- a/src/dbapi/Makefile.dbapi.lib ++++ b/src/dbapi/Makefile.dbapi.lib +@@ -10,3 +10,8 @@ LIB = dbapi + CPPFLAGS = $(ORIG_CPPFLAGS) $(SYBASE_INCLUDE) + + WATCHERS = ivanovp ++ ++#ASN_DEP = driver dbapi_driver ++ ++DLL_LIB = xncbi xutil # dbapi_driver$(DLL) ++LIBS = $(PYTHON_LIBS) +diff --git a/src/dbapi/driver/Makefile.dbapi_driver.lib b/src/dbapi/driver/Makefile.dbapi_driver.lib +index dfeac5a..bc113ed 100644 +--- a/src/dbapi/driver/Makefile.dbapi_driver.lib ++++ b/src/dbapi/driver/Makefile.dbapi_driver.lib +@@ -22,3 +22,5 @@ CXXFLAGS_darwin = -fno-inline + CXXFLAGS = $(ORIG_CXXFLAGS) $(CXXFLAGS_$(OSTYPE)) + + WATCHERS = ivanovp ++ ++DLL_LIB = xncbi xutil +diff --git a/src/dbapi/driver/samples/Makefile.dbapi_sample_base.lib b/src/dbapi/driver/samples/Makefile.dbapi_sample_base.lib +index 941ccd6..f1f872c 100644 +--- a/src/dbapi/driver/samples/Makefile.dbapi_sample_base.lib ++++ b/src/dbapi/driver/samples/Makefile.dbapi_sample_base.lib +@@ -6,3 +6,5 @@ LIB = dbapi_sample_base + CPPFLAGS = $(ORIG_CPPFLAGS) $(SYBASE_INCLUDE) + + WATCHERS = ivanovp ++ ++DLL_LIB = xncbi xutil dbapi_driver +diff --git a/src/dbapi/lang_bind/python/Makefile.python_ncbi_dbapi.lib b/src/dbapi/lang_bind/python/Makefile.python_ncbi_dbapi.lib +index ebe08c4..86ecda6 100644 +--- a/src/dbapi/lang_bind/python/Makefile.python_ncbi_dbapi.lib ++++ b/src/dbapi/lang_bind/python/Makefile.python_ncbi_dbapi.lib +@@ -11,7 +11,7 @@ LIB_OR_DLL = dll + + # Dependencies for shared library + DLL_LIB = dbapi dbapi_driver$(DLL) $(XCONNEXT) xconnect xutil xncbi +-LIBS = $(RUNPATH_ORIGIN)/python_ncbi_dbapi/$(NCBI_PACKAGE_VERSION) $(ORIG_LIBS) ++LIBS = $(RUNPATH_ORIGIN)/python_ncbi_dbapi/$(NCBI_PACKAGE_VERSION) $(ORIG_LIBS) $(PYTHON_LIBS) + # Drop other flags to build with full dependencies under ICC. + DLL_LDFLAGS = $(DLL_UNDEF_FLAGS) + +diff --git a/src/dbapi/simple/Makefile.sdbapi.lib b/src/dbapi/simple/Makefile.sdbapi.lib +index 603fd1e..0d06323 100644 +--- a/src/dbapi/simple/Makefile.sdbapi.lib ++++ b/src/dbapi/simple/Makefile.sdbapi.lib +@@ -5,3 +5,4 @@ LIB = sdbapi + + WATCHERS = ivanovp + ++DLL_LIB = xncbi xutil dbapi_driver ncbi_xdbapi_ftds xconnect xser bdb xconnserv +diff --git a/src/html/Makefile.html.lib b/src/html/Makefile.html.lib +index a57c1e3..0005299 100644 +--- a/src/html/Makefile.html.lib ++++ b/src/html/Makefile.html.lib +@@ -8,3 +8,5 @@ SRC = node html htmlhelper page pager selection components \ + LIB = xhtml + + WATCHERS = ivanov ++ ++DLL_LIB = xncbi xutil +diff --git a/src/misc/cgi_redirect/Makefile.cgi_redirect.lib b/src/misc/cgi_redirect/Makefile.cgi_redirect.lib +index 6d7a4af..332e5d0 100644 +--- a/src/misc/cgi_redirect/Makefile.cgi_redirect.lib ++++ b/src/misc/cgi_redirect/Makefile.cgi_redirect.lib +@@ -7,3 +7,5 @@ SRC = redirect + LIB = xcgi_redirect + + WATCHERS = ivanov ++ ++DLL_LIB = axf dbapi_driver xcgi xhtml xncbi +diff --git a/src/misc/grid_cgi/Makefile.xgridcgi.lib b/src/misc/grid_cgi/Makefile.xgridcgi.lib +index c9ef138..8e25cbe 100644 +--- a/src/misc/grid_cgi/Makefile.xgridcgi.lib ++++ b/src/misc/grid_cgi/Makefile.xgridcgi.lib +@@ -9,3 +9,5 @@ LIB = xgridcgi + CPPFLAGS = $(ORIG_CPPFLAGS) $(FASTCGI_INCLUDE) + + WATCHERS = vakatov ++ ++DLL_LIB = xncbi xcgi xconnserv xhtml +diff --git a/src/objects/access/Makefile.access.lib b/src/objects/access/Makefile.access.lib +index 11421d9..e7900a1 100644 +--- a/src/objects/access/Makefile.access.lib ++++ b/src/objects/access/Makefile.access.lib +@@ -1,2 +1,3 @@ + LIB = access + SRC = access__ access___ ++DLL_LIB = xncbi xser +diff --git a/src/objects/biblio/Makefile.biblio.lib b/src/objects/biblio/Makefile.biblio.lib +index 2c7d491..cb54ba6 100644 +--- a/src/objects/biblio/Makefile.biblio.lib ++++ b/src/objects/biblio/Makefile.biblio.lib +@@ -1,2 +1,4 @@ + LIB = biblio + SRC = biblio__ biblio___ citation_base ++ ++DLL_LIB = general xser xncbi xutil +diff --git a/src/objects/biotree/Makefile.biotree.lib b/src/objects/biotree/Makefile.biotree.lib +index 8019285..2c689ae 100644 +--- a/src/objects/biotree/Makefile.biotree.lib ++++ b/src/objects/biotree/Makefile.biotree.lib +@@ -1,3 +1,5 @@ + ASN_DEP = seq seqset + LIB = biotree + SRC = biotree__ biotree___ ++ ++DLL_LIB = xncbi xser +diff --git a/src/objects/blast/Makefile.blast.lib b/src/objects/blast/Makefile.blast.lib +index 0dd0fa3..d50f29f 100644 +--- a/src/objects/blast/Makefile.blast.lib ++++ b/src/objects/blast/Makefile.blast.lib +@@ -2,3 +2,5 @@ LIB = xnetblast + SRC = blast__ blast___ names + + WATCHERS = camacho ++ ++DLL_LIB = xncbi xutil xser seq seqset scoremat +diff --git a/src/objects/blast/Makefile.xnetblastcli.lib b/src/objects/blast/Makefile.xnetblastcli.lib +index 96325c4..5a72805 100644 +--- a/src/objects/blast/Makefile.xnetblastcli.lib ++++ b/src/objects/blast/Makefile.xnetblastcli.lib +@@ -2,3 +2,5 @@ ASN_DEP = xnetblast + + LIB = xnetblastcli + SRC = blastclient blastclient_ ++ ++DLL_LIB = xncbi xutil seqset xconnect xnetblast +diff --git a/src/objects/blastdb/Makefile.blastdb.lib b/src/objects/blastdb/Makefile.blastdb.lib +index be2c0d1..2884db2 100644 +--- a/src/objects/blastdb/Makefile.blastdb.lib ++++ b/src/objects/blastdb/Makefile.blastdb.lib +@@ -1,2 +1,4 @@ + LIB = blastdb + SRC = blastdb__ blastdb___ ++ ++DLL_LIB = xncbi xser seq +diff --git a/src/objects/blastxml/Makefile.blastxml.lib b/src/objects/blastxml/Makefile.blastxml.lib +index d18eb78..f90501d 100644 +--- a/src/objects/blastxml/Makefile.blastxml.lib ++++ b/src/objects/blastxml/Makefile.blastxml.lib +@@ -1,2 +1,4 @@ + LIB = blastxml + SRC = blastxml__ blastxml___ ++ ++DLL_LIB = xser +diff --git a/src/objects/cdd/Makefile.cdd.lib b/src/objects/cdd/Makefile.cdd.lib +index 978cae9..24b726c 100644 +--- a/src/objects/cdd/Makefile.cdd.lib ++++ b/src/objects/cdd/Makefile.cdd.lib +@@ -1,2 +1,4 @@ + LIB = cdd + SRC = cdd__ cdd___ ++ ++DLL_LIB = mmdb xser scoremat cn3d +diff --git a/src/objects/cn3d/Makefile.cn3d.lib b/src/objects/cn3d/Makefile.cn3d.lib +index 1af5d1d..ecd31b2 100644 +--- a/src/objects/cn3d/Makefile.cn3d.lib ++++ b/src/objects/cn3d/Makefile.cn3d.lib +@@ -1,3 +1,5 @@ + ASN_DEP = mmdb + LIB = cn3d + SRC = cn3d__ cn3d___ ++ ++DLL_LIB = mmdb xser +diff --git a/src/objects/docsum/Makefile.docsum.lib b/src/objects/docsum/Makefile.docsum.lib +index 0e68886..0bc8a1c 100644 +--- a/src/objects/docsum/Makefile.docsum.lib ++++ b/src/objects/docsum/Makefile.docsum.lib +@@ -1,2 +1,4 @@ + LIB = docsum + SRC = docsum__ docsum___ ++ ++DLL_LIB = xser +diff --git a/src/objects/entrez2/Makefile.entrez2.lib b/src/objects/entrez2/Makefile.entrez2.lib +index 4507f72..4c47ad3 100644 +--- a/src/objects/entrez2/Makefile.entrez2.lib ++++ b/src/objects/entrez2/Makefile.entrez2.lib +@@ -2,3 +2,5 @@ WATCHERS = lavr + + LIB = entrez2 + SRC = entrez2__ entrez2___ ++ ++DLL_LIB = xser +diff --git a/src/objects/entrez2/Makefile.entrez2cli.lib b/src/objects/entrez2/Makefile.entrez2cli.lib +index 42a4649..2fdcc6f 100644 +--- a/src/objects/entrez2/Makefile.entrez2cli.lib ++++ b/src/objects/entrez2/Makefile.entrez2cli.lib +@@ -4,3 +4,5 @@ ASN_DEP = entrez2 + + LIB = entrez2cli + SRC = entrez2_client entrez2_client_ ++ ++DLL_LIB = xncbi xconnect entrez2 +diff --git a/src/objects/entrezgene/Makefile.entrezgene.lib b/src/objects/entrezgene/Makefile.entrezgene.lib +index a1bd4f4..27319c3 100644 +--- a/src/objects/entrezgene/Makefile.entrezgene.lib ++++ b/src/objects/entrezgene/Makefile.entrezgene.lib +@@ -1,2 +1,4 @@ + LIB = entrezgene + SRC = entrezgene__ entrezgene___ ++ ++DLL_LIB = xser seq +diff --git a/src/objects/featdef/Makefile.featdef.lib b/src/objects/featdef/Makefile.featdef.lib +index 51c7c8d..e603711 100644 +--- a/src/objects/featdef/Makefile.featdef.lib ++++ b/src/objects/featdef/Makefile.featdef.lib +@@ -1,2 +1,4 @@ + LIB = featdef + SRC = featdef__ featdef___ ++ ++DLL_LIB = xser +diff --git a/src/objects/gbseq/Makefile.gbseq.lib b/src/objects/gbseq/Makefile.gbseq.lib +index 9dabdeb..4b27881 100644 +--- a/src/objects/gbseq/Makefile.gbseq.lib ++++ b/src/objects/gbseq/Makefile.gbseq.lib +@@ -1,2 +1,4 @@ + LIB = gbseq + SRC = gbseq__ gbseq___ ++ ++DLL_LIB = xser +diff --git a/src/objects/general/Makefile.general.lib b/src/objects/general/Makefile.general.lib +index 951304f..3be083d 100644 +--- a/src/objects/general/Makefile.general.lib ++++ b/src/objects/general/Makefile.general.lib +@@ -1,2 +1,4 @@ + LIB = general + SRC = general__ general___ uoconv ++ ++DLL_LIB = xser xncbi xutil +diff --git a/src/objects/genomecoll/Makefile.genome_collection.lib b/src/objects/genomecoll/Makefile.genome_collection.lib +index f039af6..f6b41a7 100644 +--- a/src/objects/genomecoll/Makefile.genome_collection.lib ++++ b/src/objects/genomecoll/Makefile.genome_collection.lib +@@ -4,3 +4,5 @@ LIB = genome_collection + SRC = genome_collection__ genome_collection___ + + WATCHERS = dicuccio ++ ++DLL_LIB = xser seq +diff --git a/src/objects/homologene/Makefile.homologene.lib b/src/objects/homologene/Makefile.homologene.lib +index 15d13ad..d44b2e3 100644 +--- a/src/objects/homologene/Makefile.homologene.lib ++++ b/src/objects/homologene/Makefile.homologene.lib +@@ -4,3 +4,5 @@ + + LIB = homologene + SRC = homologene__ homologene___ ++ ++DLL_LIB = xser seq +diff --git a/src/objects/id1/Makefile.id1.lib b/src/objects/id1/Makefile.id1.lib +index d60c728..bf98427 100644 +--- a/src/objects/id1/Makefile.id1.lib ++++ b/src/objects/id1/Makefile.id1.lib +@@ -4,3 +4,5 @@ LIB = id1 + SRC = id1__ id1___ + + WATCHERS = vasilche ++ ++DLL_LIB = xser seqset +diff --git a/src/objects/id1/Makefile.id1cli.lib b/src/objects/id1/Makefile.id1cli.lib +index e87ea83..745c5cb 100644 +--- a/src/objects/id1/Makefile.id1cli.lib ++++ b/src/objects/id1/Makefile.id1cli.lib +@@ -4,3 +4,5 @@ LIB = id1cli + SRC = id1_client id1_client_ + + WATCHERS = vasilche ++ ++DLL_LIB = id1 xconnect +diff --git a/src/objects/id2/Makefile.id2.lib b/src/objects/id2/Makefile.id2.lib +index 09d8b36..1e74a58 100644 +--- a/src/objects/id2/Makefile.id2.lib ++++ b/src/objects/id2/Makefile.id2.lib +@@ -2,3 +2,5 @@ LIB = id2 + SRC = id2__ id2___ + + WATCHERS = vasilche ++ ++DLL_LIB = xser seq seqsplit +diff --git a/src/objects/id2/Makefile.id2cli.lib b/src/objects/id2/Makefile.id2cli.lib +index 5d41f23..ccec62a 100644 +--- a/src/objects/id2/Makefile.id2cli.lib ++++ b/src/objects/id2/Makefile.id2cli.lib +@@ -4,3 +4,5 @@ LIB = id2cli + SRC = id2_client id2_client_ + + WATCHERS = vasilche ++ ++DLL_LIB = id2 xconnect +diff --git a/src/objects/insdseq/Makefile.insdseq.lib b/src/objects/insdseq/Makefile.insdseq.lib +index fa729b7..5754057 100644 +--- a/src/objects/insdseq/Makefile.insdseq.lib ++++ b/src/objects/insdseq/Makefile.insdseq.lib +@@ -1,2 +1,4 @@ + LIB = insdseq + SRC = insdseq__ insdseq___ ++ ++DLL_LIB = xser +diff --git a/src/objects/macro/Makefile.macro.lib b/src/objects/macro/Makefile.macro.lib +index 3a0a7c0..25a3b73 100644 +--- a/src/objects/macro/Makefile.macro.lib ++++ b/src/objects/macro/Makefile.macro.lib +@@ -2,3 +2,5 @@ + + LIB = macro + SRC = macro__ macro___ ++ ++DLL_LIB = xser +diff --git a/src/objects/medlars/Makefile.medlars.lib b/src/objects/medlars/Makefile.medlars.lib +index 3a6d0cd..5c8e00e 100644 +--- a/src/objects/medlars/Makefile.medlars.lib ++++ b/src/objects/medlars/Makefile.medlars.lib +@@ -1,2 +1,4 @@ + LIB = medlars + SRC = medlars__ medlars___ ++ ++DLL_LIB = xser biblio +diff --git a/src/objects/medline/Makefile.medline.lib b/src/objects/medline/Makefile.medline.lib +index ea28066..eb42aa4 100644 +--- a/src/objects/medline/Makefile.medline.lib ++++ b/src/objects/medline/Makefile.medline.lib +@@ -1,2 +1,4 @@ + LIB = medline + SRC = medline__ medline___ ++ ++DLL_LIB = general biblio +diff --git a/src/objects/mim/Makefile.mim.lib b/src/objects/mim/Makefile.mim.lib +index c2cd50e..2fed8f4 100644 +--- a/src/objects/mim/Makefile.mim.lib ++++ b/src/objects/mim/Makefile.mim.lib +@@ -1,2 +1,4 @@ + LIB = mim + SRC = mim__ mim___ ++ ++DLL_LIB = xser +diff --git a/src/objects/mla/Makefile.mla.lib b/src/objects/mla/Makefile.mla.lib +index a748f68..5b5523a 100644 +--- a/src/objects/mla/Makefile.mla.lib ++++ b/src/objects/mla/Makefile.mla.lib +@@ -1,2 +1,4 @@ + LIB = mla + SRC = mla__ mla___ ++ ++DLL_LIB = xser medline pubmed pub medlars +diff --git a/src/objects/mla/Makefile.mlacli.lib b/src/objects/mla/Makefile.mlacli.lib +index 48af427..4cee3ac 100644 +--- a/src/objects/mla/Makefile.mlacli.lib ++++ b/src/objects/mla/Makefile.mlacli.lib +@@ -2,3 +2,5 @@ ASN_DEP = mla + + LIB = mlacli + SRC = mla_client mla_client_ ++ ++DLL_LIB = xncbi xconnect mla +diff --git a/src/objects/mmdb/Makefile.mmdb.lib b/src/objects/mmdb/Makefile.mmdb.lib +index 6fc8e25..5c6c100 100644 +--- a/src/objects/mmdb/Makefile.mmdb.lib ++++ b/src/objects/mmdb/Makefile.mmdb.lib +@@ -8,3 +8,5 @@ CPPFLAGS = -I$(srcdir) -I$(top_srcdir)/src/objects/mmdb $(ORIG_CPPFLAGS) + + LIB = mmdb + SRC = $(ASN:%=%__) $(ASN:%=%___) ++ ++DLL_LIB = xser pub seq +diff --git a/src/objects/ncbimime/Makefile.ncbimime.lib b/src/objects/ncbimime/Makefile.ncbimime.lib +index 93cafdf..1360ade 100644 +--- a/src/objects/ncbimime/Makefile.ncbimime.lib ++++ b/src/objects/ncbimime/Makefile.ncbimime.lib +@@ -1,2 +1,4 @@ + LIB = ncbimime + SRC = ncbimime__ ncbimime___ ++ ++DLL_LIB = mmdb cn3d seqset cdd +diff --git a/src/objects/objprt/Makefile.objprt.lib b/src/objects/objprt/Makefile.objprt.lib +index 40d6b09..c00e6d2 100644 +--- a/src/objects/objprt/Makefile.objprt.lib ++++ b/src/objects/objprt/Makefile.objprt.lib +@@ -1,2 +1,4 @@ + LIB = objprt + SRC = objprt__ objprt___ ++ ++DLL_LIB = xser +diff --git a/src/objects/omssa/Makefile.omssa.lib b/src/objects/omssa/Makefile.omssa.lib +index b79617f..e1d4a9e 100644 +--- a/src/objects/omssa/Makefile.omssa.lib ++++ b/src/objects/omssa/Makefile.omssa.lib +@@ -2,3 +2,5 @@ APP_DEP = seq + + LIB = omssa + SRC = omssa__ omssa___ ++ ++DLL_LIB = seq +diff --git a/src/objects/pcassay/Makefile.pcassay.lib b/src/objects/pcassay/Makefile.pcassay.lib +index 1086865..587adb5 100644 +--- a/src/objects/pcassay/Makefile.pcassay.lib ++++ b/src/objects/pcassay/Makefile.pcassay.lib +@@ -1,2 +1,4 @@ + LIB = pcassay + SRC = pcassay__ pcassay___ ++ ++DLL_LIB = xser pcsubstance seq +diff --git a/src/objects/pcsubstance/Makefile.pcsubstance.lib b/src/objects/pcsubstance/Makefile.pcsubstance.lib +index b36802e..c3f6a39 100644 +--- a/src/objects/pcsubstance/Makefile.pcsubstance.lib ++++ b/src/objects/pcsubstance/Makefile.pcsubstance.lib +@@ -1,2 +1,4 @@ + LIB = pcsubstance + SRC = pcsubstance__ pcsubstance___ ++ ++DLL_LIB = xser general pub +diff --git a/src/objects/proj/Makefile.proj.lib b/src/objects/proj/Makefile.proj.lib +index c5bb3d3..fbde99a 100644 +--- a/src/objects/proj/Makefile.proj.lib ++++ b/src/objects/proj/Makefile.proj.lib +@@ -1,2 +1,4 @@ + LIB = proj + SRC = proj__ proj___ ++ ++DLL_LIB = xser pubmed seqset +diff --git a/src/objects/pub/Makefile.pub.lib b/src/objects/pub/Makefile.pub.lib +index 78c12e1..9baa08d 100644 +--- a/src/objects/pub/Makefile.pub.lib ++++ b/src/objects/pub/Makefile.pub.lib +@@ -1,2 +1,4 @@ + LIB = pub + SRC = pub__ pub___ ++ ++DLL_LIB = medline biblio +diff --git a/src/objects/pubmed/Makefile.pubmed.lib b/src/objects/pubmed/Makefile.pubmed.lib +index 8b8d553..46e3125 100644 +--- a/src/objects/pubmed/Makefile.pubmed.lib ++++ b/src/objects/pubmed/Makefile.pubmed.lib +@@ -1,2 +1,4 @@ + LIB = pubmed + SRC = pubmed__ pubmed___ ++ ++DLL_LIB = xser medline +diff --git a/src/objects/remap/Makefile.remap.lib b/src/objects/remap/Makefile.remap.lib +index 9a35d90..1256648 100644 +--- a/src/objects/remap/Makefile.remap.lib ++++ b/src/objects/remap/Makefile.remap.lib +@@ -1,2 +1,4 @@ + LIB = remap + SRC = remap__ remap___ ++ ++DLL_LIB = xser seq +diff --git a/src/objects/remap/Makefile.remapcli.lib b/src/objects/remap/Makefile.remapcli.lib +index e45f34f..2751bf9 100644 +--- a/src/objects/remap/Makefile.remapcli.lib ++++ b/src/objects/remap/Makefile.remapcli.lib +@@ -4,3 +4,5 @@ ASN_DEP = remap + + LIB = remapcli + SRC = remap_client remap_client_ ++ ++DLL_LIB = xncbi xconnect remap +diff --git a/src/objects/scoremat/Makefile.scoremat.lib b/src/objects/scoremat/Makefile.scoremat.lib +index 62e01f5..93bb071 100644 +--- a/src/objects/scoremat/Makefile.scoremat.lib ++++ b/src/objects/scoremat/Makefile.scoremat.lib +@@ -1,2 +1,4 @@ + LIB = scoremat + SRC = scoremat__ scoremat___ ++ ++DLL_LIB = seqset seq +diff --git a/src/objects/seq/Makefile.seq.lib b/src/objects/seq/Makefile.seq.lib +index 1b5edc5..30ef316 100644 +--- a/src/objects/seq/Makefile.seq.lib ++++ b/src/objects/seq/Makefile.seq.lib +@@ -13,3 +13,5 @@ SRC = $(ASN:%=%__) $(ASN:%=%___) seqport_util \ + seq_loc_from_string seq_loc_reverse_complementer + + WATCHERS = vasilche grichenk ++ ++DLL_LIB = general seqcode pub sequtil biblio xser xncbi xutil +diff --git a/src/objects/seqcode/Makefile.seqcode.lib b/src/objects/seqcode/Makefile.seqcode.lib +index dc9d60e..dabd95b 100644 +--- a/src/objects/seqcode/Makefile.seqcode.lib ++++ b/src/objects/seqcode/Makefile.seqcode.lib +@@ -1,2 +1,4 @@ + LIB = seqcode + SRC = seqcode__ seqcode___ ++ ++DLL_LIB = xncbi xser +diff --git a/src/objects/seqedit/Makefile.seqedit.lib b/src/objects/seqedit/Makefile.seqedit.lib +index 283a9b7..520b0bb 100644 +--- a/src/objects/seqedit/Makefile.seqedit.lib ++++ b/src/objects/seqedit/Makefile.seqedit.lib +@@ -1,3 +1,4 @@ + LIB = seqedit + SRC = seqedit__ seqedit___ + ++DLL_LIB = xser seq seqset +diff --git a/src/objects/seqset/Makefile.seqset.lib b/src/objects/seqset/Makefile.seqset.lib +index 87f16d0..febce67 100644 +--- a/src/objects/seqset/Makefile.seqset.lib ++++ b/src/objects/seqset/Makefile.seqset.lib +@@ -1,2 +1,3 @@ + LIB = seqset + SRC = seqset__ seqset___ gb_release_file ++DLL_LIB = xser seq +diff --git a/src/objects/seqsplit/Makefile.seqsplit.lib b/src/objects/seqsplit/Makefile.seqsplit.lib +index 87ae869..1743321 100644 +--- a/src/objects/seqsplit/Makefile.seqsplit.lib ++++ b/src/objects/seqsplit/Makefile.seqsplit.lib +@@ -2,3 +2,5 @@ LIB = seqsplit + SRC = seqsplit__ seqsplit___ + + WATCHERS = vasilche ++ ++DLL_LIB = xser seq seqset +diff --git a/src/objects/seqtest/Makefile.seqtest.lib b/src/objects/seqtest/Makefile.seqtest.lib +index 609a12c..e3d1e4b 100644 +--- a/src/objects/seqtest/Makefile.seqtest.lib ++++ b/src/objects/seqtest/Makefile.seqtest.lib +@@ -4,3 +4,5 @@ ASN = seqtest + + LIB = seqtest + SRC = $(ASN:%=%__) $(ASN:%=%___) ++ ++DLL_LIB = xser seq +diff --git a/src/objects/submit/Makefile.submit.lib b/src/objects/submit/Makefile.submit.lib +index 74798f8..c74707c 100644 +--- a/src/objects/submit/Makefile.submit.lib ++++ b/src/objects/submit/Makefile.submit.lib +@@ -1,2 +1,3 @@ + LIB = submit + SRC = submit__ submit___ ++DLL_LIB = xser xncbi seq biblio seqset +diff --git a/src/objects/taxon1/Makefile.taxon1.lib b/src/objects/taxon1/Makefile.taxon1.lib +index 61658ab..f46db75 100644 +--- a/src/objects/taxon1/Makefile.taxon1.lib ++++ b/src/objects/taxon1/Makefile.taxon1.lib +@@ -3,3 +3,5 @@ LIB = taxon1 + SRC = taxon1__ taxon1___ taxon1 cache utils ctreecont + + WATCHERS = domrach ++ ++DLL_LIB = xser seq xconnect +diff --git a/src/objects/taxon3/Makefile.taxon3.lib b/src/objects/taxon3/Makefile.taxon3.lib +index 7e4c93d..00be2c0 100644 +--- a/src/objects/taxon3/Makefile.taxon3.lib ++++ b/src/objects/taxon3/Makefile.taxon3.lib +@@ -4,3 +4,5 @@ LIB = taxon3 + SRC = taxon3__ taxon3___ taxon3 + + WATCHERS = bollin ++ ++DLL_LIB = connect xser xconnect seq +diff --git a/src/objects/tinyseq/Makefile.tinyseq.lib b/src/objects/tinyseq/Makefile.tinyseq.lib +index 1c7ccf3..e1954cc 100644 +--- a/src/objects/tinyseq/Makefile.tinyseq.lib ++++ b/src/objects/tinyseq/Makefile.tinyseq.lib +@@ -1,2 +1,4 @@ + LIB = tinyseq + SRC = tinyseq__ tinyseq___ ++ ++DLL_LIB = xser +diff --git a/src/objects/valerr/Makefile.valerr.lib b/src/objects/valerr/Makefile.valerr.lib +index b202355..9699bb2 100644 +--- a/src/objects/valerr/Makefile.valerr.lib ++++ b/src/objects/valerr/Makefile.valerr.lib +@@ -2,3 +2,5 @@ LIB = valerr + SRC = valerr__ valerr___ + + ASN_DEP = seqset ++ ++DLL_LIB = xser +diff --git a/src/objects/valid/Makefile.valid.lib b/src/objects/valid/Makefile.valid.lib +index 86a00a0..64226d6 100644 +--- a/src/objects/valid/Makefile.valid.lib ++++ b/src/objects/valid/Makefile.valid.lib +@@ -1,3 +1,5 @@ + # $Id: Makefile.valid.lib 156738 2009-04-07 16:35:10Z ucko $ + LIB = valid + SRC = valid__ valid___ ++ ++DLL_LIB = xser xregexp +diff --git a/src/objects/variation/Makefile.variation.lib b/src/objects/variation/Makefile.variation.lib +index f21f84a..9ba5e9d 100644 +--- a/src/objects/variation/Makefile.variation.lib ++++ b/src/objects/variation/Makefile.variation.lib +@@ -1,2 +1,3 @@ + LIB = variation + SRC = variation__ variation___ ++DLL_LIB = xser general seq +diff --git a/src/objmgr/split/Makefile.id2_split.lib b/src/objmgr/split/Makefile.id2_split.lib +index fafa70a..8a53975 100644 +--- a/src/objmgr/split/Makefile.id2_split.lib ++++ b/src/objmgr/split/Makefile.id2_split.lib +@@ -17,6 +17,6 @@ LIB = id2_split + + CPPFLAGS = $(ORIG_CPPFLAGS) $(CMPRS_INCLUDE) + +-DLL_LIB = $(SOBJMGR_LIBS) ++DLL_LIB = $(SOBJMGR_LIBS) seqsplit xcompress + + WATCHERS = vasilche +diff --git a/src/objmgr/util/Makefile.util.lib b/src/objmgr/util/Makefile.util.lib +index 90eeee0..138e836 100644 +--- a/src/objmgr/util/Makefile.util.lib ++++ b/src/objmgr/util/Makefile.util.lib +@@ -10,3 +10,4 @@ LIB = xobjutil + + WATCHERS = ucko vasilche + ++DLL_LIB = xser xobjmgr +diff --git a/src/objtools/align/Makefile.xalntool.lib b/src/objtools/align/Makefile.xalntool.lib +index cb9846d..9c2a8f9 100644 +--- a/src/objtools/align/Makefile.xalntool.lib ++++ b/src/objtools/align/Makefile.xalntool.lib +@@ -6,3 +6,5 @@ ASN_DEP = seqset + + LIB = xalntool + SRC = alngraphic ++ ++DLL_LIB = access dbapi_driver general seq xhtml xncbi xobjmgr xobjutil xser # align_format axf blastinput +diff --git a/src/objtools/align_format/Makefile.align_format.lib b/src/objtools/align_format/Makefile.align_format.lib +index 4b3e59e..c67c352 100644 +--- a/src/objtools/align_format/Makefile.align_format.lib ++++ b/src/objtools/align_format/Makefile.align_format.lib +@@ -18,3 +18,5 @@ CPPFLAGS = $(ORIG_CPPFLAGS) + # LIB_OR_DLL = dll + + WATCHERS = zaretska jianye madden camacho ++ ++DLL_LIB = seqdb blastdb xser xhtml gene_info xnetblast blast_services ncbi_xloader_genbank xalnmgr xcgi xobjread xobjutil +diff --git a/src/objtools/alnmgr/Makefile.alnmgr.lib b/src/objtools/alnmgr/Makefile.alnmgr.lib +index e32c351..41355ff 100644 +--- a/src/objtools/alnmgr/Makefile.alnmgr.lib ++++ b/src/objtools/alnmgr/Makefile.alnmgr.lib +@@ -12,3 +12,4 @@ SRC = aln_builders aln_converters aln_generators aln_seqid aln_serial \ + + WATCHERS = todorov dicuccio grichenk + ++DLL_LIB = tables dbapi_driver ncbi_xcache_bdb seq seqset sequtil xncbi xobjmgr xobjutil xser # align_format axf +diff --git a/src/objtools/blast/blastdb_format/Makefile.blastdb_format.lib b/src/objtools/blast/blastdb_format/Makefile.blastdb_format.lib +index d8177ed..aa4d8e4 100644 +--- a/src/objtools/blast/blastdb_format/Makefile.blastdb_format.lib ++++ b/src/objtools/blast/blastdb_format/Makefile.blastdb_format.lib +@@ -18,3 +18,5 @@ CPPFLAGS = $(ORIG_CPPFLAGS) + # CXXFLAGS = $(FAST_CXXFLAGS) + # + # LIB_OR_DLL = dll ++ ++DLL_LIB = xncbi xser xobjutil seq seqdb +diff --git a/src/objtools/blast/gene_info_reader/Makefile.gene_info.lib b/src/objtools/blast/gene_info_reader/Makefile.gene_info.lib +index bf5fd1b..c32aca4 100644 +--- a/src/objtools/blast/gene_info_reader/Makefile.gene_info.lib ++++ b/src/objtools/blast/gene_info_reader/Makefile.gene_info.lib +@@ -4,3 +4,5 @@ WATCHERS = camacho + + LIB = gene_info + SRC = gene_info gene_info_reader file_utils ++ ++DLL_LIB = xncbi +diff --git a/src/objtools/blast/gene_info_writer/Makefile.gene_info_writer.lib b/src/objtools/blast/gene_info_writer/Makefile.gene_info_writer.lib +index b0a00dc..37569f8 100644 +--- a/src/objtools/blast/gene_info_writer/Makefile.gene_info_writer.lib ++++ b/src/objtools/blast/gene_info_writer/Makefile.gene_info_writer.lib +@@ -6,3 +6,5 @@ LIB = gene_info_writer + SRC = gene_info_writer + + ASN_DEP = blastdb ++ ++DLL_LIB = gene_info xncbi seqdb +diff --git a/src/objtools/blast/seqdb_reader/Makefile.seqdb.lib b/src/objtools/blast/seqdb_reader/Makefile.seqdb.lib +index 25898aa..0b0e478 100644 +--- a/src/objtools/blast/seqdb_reader/Makefile.seqdb.lib ++++ b/src/objtools/blast/seqdb_reader/Makefile.seqdb.lib +@@ -29,3 +29,5 @@ CXXFLAGS = $(FAST_CXXFLAGS) + LDFLAGS = $(FAST_LDFLAGS) + + WATCHERS = maning camacho ++ ++DLL_LIB = blastdb xobjmgr +diff --git a/src/objtools/blast/seqdb_writer/Makefile.writedb.lib b/src/objtools/blast/seqdb_writer/Makefile.writedb.lib +index 7b9c8e1..6dbdbaa 100644 +--- a/src/objtools/blast/seqdb_writer/Makefile.writedb.lib ++++ b/src/objtools/blast/seqdb_writer/Makefile.writedb.lib +@@ -13,3 +13,5 @@ CXXFLAGS = $(FAST_CXXFLAGS) + LDFLAGS = $(FAST_LDFLAGS) + + WATCHERS = maning camacho ++ ++DLL_LIB = seq blastdb seqdb xobjmgr xobjread xutil +diff --git a/src/objtools/blast/services/Makefile.blast_services.lib b/src/objtools/blast/services/Makefile.blast_services.lib +index 10a878c..7a70b22 100644 +--- a/src/objtools/blast/services/Makefile.blast_services.lib ++++ b/src/objtools/blast/services/Makefile.blast_services.lib +@@ -12,3 +12,4 @@ CFLAGS = $(FAST_CFLAGS) + CXXFLAGS = $(FAST_CXXFLAGS) + LDFLAGS = $(FAST_LDFLAGS) + ++DLL_LIB = xncbi xser xnetblast xnetblastcli +diff --git a/src/objtools/cddalignview/Makefile.cddalignview.lib b/src/objtools/cddalignview/Makefile.cddalignview.lib +index 8e39baa..f4d3a35 100644 +--- a/src/objtools/cddalignview/Makefile.cddalignview.lib ++++ b/src/objtools/cddalignview/Makefile.cddalignview.lib +@@ -11,3 +11,5 @@ SRC = \ + cav_seqset + + LIB = xcddalignview ++ ++DLL_LIB = cdd dbapi_driver general ncbimime seq seqset xncbi xser # align_format axf ncbi_xloader_bam +diff --git a/src/objtools/cleanup/Makefile.cleanup.lib b/src/objtools/cleanup/Makefile.cleanup.lib +index 663d755..ad7b3cf 100644 +--- a/src/objtools/cleanup/Makefile.cleanup.lib ++++ b/src/objtools/cleanup/Makefile.cleanup.lib +@@ -10,7 +10,7 @@ SRC = autogenerated_cleanup cleanup \ + cleanup_utils \ + newcleanupp + +-DLL_LIB = xregexp $(PCRE_LIB) ++DLL_LIB = xregexp $(PCRE_LIB) access biblio general pub seq seqset sequtil submit xobjmgr xobjutil xser + LIB = xcleanup + + LIBS = $(PCRE_LIBS) +diff --git a/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb.lib b/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb.lib +index 80af69f..704ed7a 100644 +--- a/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb.lib ++++ b/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb.lib +@@ -6,3 +6,6 @@ SRC = bdbloader cached_sequence local_blastdb_adapter + ASN_DEP = blastdb seqset + + WATCHERS = camacho ++ ++DLL_LIB = seqdb ++ +diff --git a/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb_rmt.lib b/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb_rmt.lib +index 80abb48..2ddec92 100644 +--- a/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb_rmt.lib ++++ b/src/objtools/data_loaders/blastdb/Makefile.ncbi_xloader_blastdb_rmt.lib +@@ -6,3 +6,5 @@ SRC = bdbloader_rmt remote_blastdb_adapter + ASN_DEP = blastdb xnetblast + + WATCHERS = camacho ++ ++DLL_LIB = blast_services ncbi_xloader_blastdb xobjmgr +diff --git a/src/objtools/data_loaders/cdd/Makefile.ncbi_xloader_cdd.lib b/src/objtools/data_loaders/cdd/Makefile.ncbi_xloader_cdd.lib +index a51042b..fa92fc9 100644 +--- a/src/objtools/data_loaders/cdd/Makefile.ncbi_xloader_cdd.lib ++++ b/src/objtools/data_loaders/cdd/Makefile.ncbi_xloader_cdd.lib +@@ -9,3 +9,5 @@ LIB = ncbi_xloader_cdd + SRC = cdd + + ASN_DEP = seqset ++ ++DLL_LIB = dbapi_driver general seq seqset xconnect xncbi xobjmgr xser # align_format axf ncbi_xloader_bam +diff --git a/src/objtools/data_loaders/genbank/Makefile.ncbi_xreader.lib b/src/objtools/data_loaders/genbank/Makefile.ncbi_xreader.lib +index f2b2b49..864e4b1 100644 +--- a/src/objtools/data_loaders/genbank/Makefile.ncbi_xreader.lib ++++ b/src/objtools/data_loaders/genbank/Makefile.ncbi_xreader.lib +@@ -12,6 +12,6 @@ LIB = ncbi_xreader + LIB_OR_DLL = both + + # Dependencies for shared library +-DLL_LIB = ++DLL_LIB = xcompress xobjmgr seqsplit xconnect id1 id2 + + WATCHERS = vasilche +diff --git a/src/objtools/data_loaders/genbank/id2/Makefile.ncbi_xreader_id2.lib b/src/objtools/data_loaders/genbank/id2/Makefile.ncbi_xreader_id2.lib +index 0a29cbf..74c30dc 100644 +--- a/src/objtools/data_loaders/genbank/id2/Makefile.ncbi_xreader_id2.lib ++++ b/src/objtools/data_loaders/genbank/id2/Makefile.ncbi_xreader_id2.lib +@@ -15,3 +15,5 @@ CPPFLAGS = $(ORIG_CPPFLAGS) $(Z_INCLUDE) + # DLL_LIB = xconnect ncbi_xreader$(DLL) + + WATCHERS = vasilche ++ ++DLL_LIB = xncbi gene_info id2 ncbi_xreader xconnect xser +diff --git a/src/objtools/data_loaders/patcher/Makefile.ncbi_xloader_patcher.lib b/src/objtools/data_loaders/patcher/Makefile.ncbi_xloader_patcher.lib +index 8d09d8c..d6040ed 100644 +--- a/src/objtools/data_loaders/patcher/Makefile.ncbi_xloader_patcher.lib ++++ b/src/objtools/data_loaders/patcher/Makefile.ncbi_xloader_patcher.lib +@@ -7,3 +7,5 @@ ASN_DEP = seq seqset seqedit + + + WATCHERS = vasilche ++ ++DLL_LIB = dbapi_driver seq seqedit seqset xncbi xobjmgr xser # axf +diff --git a/src/objtools/data_loaders/trace/Makefile.xloader_trace.lib b/src/objtools/data_loaders/trace/Makefile.xloader_trace.lib +index d2debd5..33fed34 100644 +--- a/src/objtools/data_loaders/trace/Makefile.xloader_trace.lib ++++ b/src/objtools/data_loaders/trace/Makefile.xloader_trace.lib +@@ -9,3 +9,5 @@ LIB = ncbi_xloader_trace + SRC = trace_chgr + + ASN_DEP = id1 ++ ++DLL_LIB = dbapi_driver general id1 id1cli seq xncbi xobjmgr xser # align_format axf +diff --git a/src/objtools/edit/Makefile.edit.lib b/src/objtools/edit/Makefile.edit.lib +index 7ce0d11..f5458c5 100644 +--- a/src/objtools/edit/Makefile.edit.lib ++++ b/src/objtools/edit/Makefile.edit.lib +@@ -11,3 +11,5 @@ LIB = xobjedit + ASN_DEP = seqset + + WATCHERS = bollin ++ ++DLL_LIB = xncbi seq xobjutil xobjmgr +diff --git a/src/objtools/eutils/api/Makefile.eutils.lib b/src/objtools/eutils/api/Makefile.eutils.lib +index da71ea9..b444e72 100644 +--- a/src/objtools/eutils/api/Makefile.eutils.lib ++++ b/src/objtools/eutils/api/Makefile.eutils.lib +@@ -10,3 +10,5 @@ ASN_DEP = einfo esearch egquery epost elink esummary espell uilist \ + ehistory + + WATCHERS = grichenk ++ ++DLL_LIB = dbapi_driver xconnect xncbi xser # align_format axf ncbi_xloader_bam +diff --git a/src/objtools/eutils/egquery/Makefile.egquery.lib b/src/objtools/eutils/egquery/Makefile.egquery.lib +index 82b4ed0..7030a29 100644 +--- a/src/objtools/eutils/egquery/Makefile.egquery.lib ++++ b/src/objtools/eutils/egquery/Makefile.egquery.lib +@@ -4,3 +4,5 @@ LIB = egquery + SRC = egquery__ egquery___ + + WATCHERS = grichenk ++ ++DLL_LIB = xser +diff --git a/src/objtools/eutils/ehistory/Makefile.ehistory.lib b/src/objtools/eutils/ehistory/Makefile.ehistory.lib +index f99ca0f..5683a74 100644 +--- a/src/objtools/eutils/ehistory/Makefile.ehistory.lib ++++ b/src/objtools/eutils/ehistory/Makefile.ehistory.lib +@@ -4,3 +4,5 @@ LIB = ehistory + SRC = ehistory__ ehistory___ + + WATCHERS = grichenk ++ ++DLL_LIB = xser +diff --git a/src/objtools/eutils/einfo/Makefile.einfo.lib b/src/objtools/eutils/einfo/Makefile.einfo.lib +index e18413d..7eaee71 100644 +--- a/src/objtools/eutils/einfo/Makefile.einfo.lib ++++ b/src/objtools/eutils/einfo/Makefile.einfo.lib +@@ -4,3 +4,5 @@ LIB = einfo + SRC = einfo__ einfo___ + + WATCHERS = grichenk ++ ++DLL_LIB = xser +diff --git a/src/objtools/eutils/elink/Makefile.elink.lib b/src/objtools/eutils/elink/Makefile.elink.lib +index 87f352c..692835c 100644 +--- a/src/objtools/eutils/elink/Makefile.elink.lib ++++ b/src/objtools/eutils/elink/Makefile.elink.lib +@@ -4,3 +4,5 @@ LIB = elink + SRC = elink__ elink___ + + WATCHERS = grichenk ++ ++DLL_LIB = xser +diff --git a/src/objtools/eutils/epost/Makefile.epost.lib b/src/objtools/eutils/epost/Makefile.epost.lib +index 4a456ed..d73f41b 100644 +--- a/src/objtools/eutils/epost/Makefile.epost.lib ++++ b/src/objtools/eutils/epost/Makefile.epost.lib +@@ -4,3 +4,5 @@ LIB = epost + SRC = epost__ epost___ + + WATCHERS = grichenk ++ ++DLL_LIB = xser +diff --git a/src/objtools/eutils/esearch/Makefile.esearch.lib b/src/objtools/eutils/esearch/Makefile.esearch.lib +index bb5b64b..71912da 100644 +--- a/src/objtools/eutils/esearch/Makefile.esearch.lib ++++ b/src/objtools/eutils/esearch/Makefile.esearch.lib +@@ -4,3 +4,5 @@ LIB = esearch + SRC = esearch__ esearch___ + + WATCHERS = grichenk ++ ++DLL_LIB = xser +diff --git a/src/objtools/eutils/espell/Makefile.espell.lib b/src/objtools/eutils/espell/Makefile.espell.lib +index 7cf1a34..25be846 100644 +--- a/src/objtools/eutils/espell/Makefile.espell.lib ++++ b/src/objtools/eutils/espell/Makefile.espell.lib +@@ -4,3 +4,5 @@ LIB = espell + SRC = espell__ espell___ + + WATCHERS = grichenk ++ ++DLL_LIB = xser +diff --git a/src/objtools/eutils/esummary/Makefile.esummary.lib b/src/objtools/eutils/esummary/Makefile.esummary.lib +index 4d3e058..1f74c06 100644 +--- a/src/objtools/eutils/esummary/Makefile.esummary.lib ++++ b/src/objtools/eutils/esummary/Makefile.esummary.lib +@@ -4,3 +4,5 @@ LIB = esummary + SRC = esummary__ esummary___ + + WATCHERS = grichenk ++ ++DLL_LIB = xser +diff --git a/src/objtools/eutils/linkout/Makefile.linkout.lib b/src/objtools/eutils/linkout/Makefile.linkout.lib +index 19b2b8a..77dcc3c 100644 +--- a/src/objtools/eutils/linkout/Makefile.linkout.lib ++++ b/src/objtools/eutils/linkout/Makefile.linkout.lib +@@ -4,3 +4,5 @@ SRC = linkout__ linkout___ + LIB = linkout + + WATCHERS = grichenk ++ ++DLL_LIB = xser +diff --git a/src/objtools/eutils/uilist/Makefile.uilist.lib b/src/objtools/eutils/uilist/Makefile.uilist.lib +index b49c3c5..2ee63f0 100644 +--- a/src/objtools/eutils/uilist/Makefile.uilist.lib ++++ b/src/objtools/eutils/uilist/Makefile.uilist.lib +@@ -4,3 +4,5 @@ SRC = uilist__ uilist___ + LIB = uilist + + WATCHERS = grichenk ++ ++DLL_LIB = access dbapi_driver xncbi xser # align_format axf +diff --git a/src/objtools/format/Makefile.xformat.lib b/src/objtools/format/Makefile.xformat.lib +index a4fc469..fa58b3c 100644 +--- a/src/objtools/format/Makefile.xformat.lib ++++ b/src/objtools/format/Makefile.xformat.lib +@@ -19,3 +19,5 @@ SRC = accession_item basecount_item comment_item contig_item date_item \ + gather_iter html_anchor_item inst_info_map + + WATCHERS = ludwigf dicuccio kornbluh ++ ++DLL_LIB = submit connect xncbi gbseq xobjmgr xobjutil xalnmgr xconnect +diff --git a/src/objtools/lds/Makefile.lds.lib b/src/objtools/lds/Makefile.lds.lib +index e371035..689cfb4 100644 +--- a/src/objtools/lds/Makefile.lds.lib ++++ b/src/objtools/lds/Makefile.lds.lib +@@ -9,6 +9,6 @@ SRC = lds lds_reader lds_query \ + lds_coreobjreader lds_files lds_object lds_manager + + # Dependencies for shared library +-DLL_LIB = bdb ++DLL_LIB = bdb seq xobjread xobjmgr xobjutil + + WATCHERS = vasilche +diff --git a/src/objtools/manip/Makefile.xobjmanip.lib b/src/objtools/manip/Makefile.xobjmanip.lib +index 300ceb2..4a81ac9 100644 +--- a/src/objtools/manip/Makefile.xobjmanip.lib ++++ b/src/objtools/manip/Makefile.xobjmanip.lib +@@ -6,3 +6,5 @@ LIB = xobjmanip + SRC = sage_manip + + WATCHERS = dicuccio ++ ++DLL_LIB = xncbi general +diff --git a/src/objtools/readers/Makefile.xobjread.lib b/src/objtools/readers/Makefile.xobjread.lib +index 0fbffd4..4ca9fed 100644 +--- a/src/objtools/readers/Makefile.xobjread.lib ++++ b/src/objtools/readers/Makefile.xobjread.lib +@@ -19,5 +19,4 @@ SRC = read_util format_guess_ex \ + best_feat_finder source_mod_parser fasta_exception + + +-DLL_LIB = creaders +- ++DLL_LIB = creaders xncbi seq biblio seqset +diff --git a/src/objtools/readers/Makefile.xobjreadex.lib b/src/objtools/readers/Makefile.xobjreadex.lib +index 85eefe2..9f317ae 100644 +--- a/src/objtools/readers/Makefile.xobjreadex.lib ++++ b/src/objtools/readers/Makefile.xobjreadex.lib +@@ -8,4 +8,4 @@ LIB = xobjreadex + SRC = glimmer_reader idmapper idmapper_builtin idmapper_config \ + idmapper_database source_mod_parser_wrapper + +-DLL_LIB = xobjread ++DLL_LIB = xobjread xncbi xutil seq xobjmgr xobjutil +diff --git a/src/objtools/seqmasks_io/Makefile.seqmasks_io.lib b/src/objtools/seqmasks_io/Makefile.seqmasks_io.lib +index 687af1e..f48568c 100644 +--- a/src/objtools/seqmasks_io/Makefile.seqmasks_io.lib ++++ b/src/objtools/seqmasks_io/Makefile.seqmasks_io.lib +@@ -11,6 +11,6 @@ mask_writer_seqloc \ + mask_writer_blastdb_maskinfo + + ASN_DEP = seqset +-DLL_LIB = seqdb blastdb ++DLL_LIB = seqdb blastdb xobjread xobjutil + + WATCHERS = morgulis camacho +diff --git a/src/objtools/simple/Makefile.xobjsimple.lib b/src/objtools/simple/Makefile.xobjsimple.lib +index dab25d6..f676dc7 100644 +--- a/src/objtools/simple/Makefile.xobjsimple.lib ++++ b/src/objtools/simple/Makefile.xobjsimple.lib +@@ -10,3 +10,4 @@ ASN_DEP = seqset + LIB = xobjsimple + SRC = simple_om + ++DLL_LIB = xobjmgr ncbi_xloader_genbank +diff --git a/src/objtools/snputil/Makefile.snputil.lib b/src/objtools/snputil/Makefile.snputil.lib +index 15abef3..5ad1560 100644 +--- a/src/objtools/snputil/Makefile.snputil.lib ++++ b/src/objtools/snputil/Makefile.snputil.lib +@@ -9,3 +9,5 @@ SRC = snp_utils snp_bitfield \ + ASN_DEP = seqset + + WATCHERS = rudnev ++ ++DLL_LIB = general seq xncbi xobjmgr xser +diff --git a/src/objtools/validator/Makefile.validator.lib b/src/objtools/validator/Makefile.validator.lib +index 80a74d8..6eec94b 100644 +--- a/src/objtools/validator/Makefile.validator.lib ++++ b/src/objtools/validator/Makefile.validator.lib +@@ -19,3 +19,5 @@ NOOPT_CXX = $(CXX_WRAPPER) $(CXX) $(CXXFLAGS_ALL:-xO%=) + + lat_lon_country_map.o: $(srcdir)/lat_lon_country_map.cpp + $(NOOPT_CXX) $(srcdir)/lat_lon_country_map.cpp -o $@ $(CXX_FILTER) ++ ++DLL_LIB = xncbi xobjutil xalnmgr xformat taxon3 valerr valid +diff --git a/src/objtools/writers/Makefile.xobjwrite.lib b/src/objtools/writers/Makefile.xobjwrite.lib +index cd6596b..a7d0c01 100644 +--- a/src/objtools/writers/Makefile.xobjwrite.lib ++++ b/src/objtools/writers/Makefile.xobjwrite.lib +@@ -15,3 +15,4 @@ SRC = agp_write \ + + WATCHERS = ludwigf boukn + ++DLL_LIB = xobjutil xalnmgr +diff --git a/src/sample/app/asn/Makefile.sample_asn.lib b/src/sample/app/asn/Makefile.sample_asn.lib +index 0db9ebd..26e6ad9 100644 +--- a/src/sample/app/asn/Makefile.sample_asn.lib ++++ b/src/sample/app/asn/Makefile.sample_asn.lib +@@ -10,3 +10,5 @@ LIB = sample_asn + ASN_DEP = general + + WATCHERS = gouriano ++ ++DLL_LIB = access align_format axf dbapi_driver general xncbi xser +diff --git a/src/sample/app/soap/Makefile.soap_dataobj.lib b/src/sample/app/soap/Makefile.soap_dataobj.lib +index 4b87f51..c398ded 100644 +--- a/src/sample/app/soap/Makefile.soap_dataobj.lib ++++ b/src/sample/app/soap/Makefile.soap_dataobj.lib +@@ -2,3 +2,5 @@ LIB = soap_dataobj + SRC = soap_dataobj__ soap_dataobj___ + + WATCHERS = gouriano ++ ++DLL_LIB = access align_format axf dbapi_driver xncbi xser +diff --git a/src/sample/lib/asn_lib/Makefile.asn_sample_lib.lib b/src/sample/lib/asn_lib/Makefile.asn_sample_lib.lib +index f9d6103..4c22831 100644 +--- a/src/sample/lib/asn_lib/Makefile.asn_sample_lib.lib ++++ b/src/sample/lib/asn_lib/Makefile.asn_sample_lib.lib +@@ -2,3 +2,5 @@ LIB = asn_sample_lib + SRC = asn_sample_lib__ asn_sample_lib___ + + WATCHERS = gouriano ++ ++DLL_LIB = access align_format axf dbapi_driver xncbi xser +diff --git a/src/sample/lib/basic/Makefile.basic_sample_lib.lib b/src/sample/lib/basic/Makefile.basic_sample_lib.lib +index a6ba11a..364d9fc 100644 +--- a/src/sample/lib/basic/Makefile.basic_sample_lib.lib ++++ b/src/sample/lib/basic/Makefile.basic_sample_lib.lib +@@ -5,3 +5,5 @@ SRC = basic_sample_lib + + + WATCHERS = gouriano ++ ++DLL_LIB = xncbi +diff --git a/src/sample/lib/dtd/Makefile.dtd_sample_lib.lib b/src/sample/lib/dtd/Makefile.dtd_sample_lib.lib +index d2a27ef..a63a7e8 100644 +--- a/src/sample/lib/dtd/Makefile.dtd_sample_lib.lib ++++ b/src/sample/lib/dtd/Makefile.dtd_sample_lib.lib +@@ -2,3 +2,5 @@ LIB = dtd_sample_lib + SRC = dtd_sample_lib__ dtd_sample_lib___ + + WATCHERS = gouriano ++ ++DLL_LIB = access align_format axf dbapi_driver xncbi xser +diff --git a/src/sample/lib/xsd/Makefile.xsd_sample_lib.lib b/src/sample/lib/xsd/Makefile.xsd_sample_lib.lib +index 4b7b6e2..838e8ea 100644 +--- a/src/sample/lib/xsd/Makefile.xsd_sample_lib.lib ++++ b/src/sample/lib/xsd/Makefile.xsd_sample_lib.lib +@@ -2,3 +2,5 @@ LIB = xsd_sample_lib + SRC = xsd_sample_lib__ xsd_sample_lib___ + + WATCHERS = gouriano ++ ++DLL_LIB = access align_format axf dbapi_driver xncbi xser +diff --git a/src/serial/Makefile.serial.lib b/src/serial/Makefile.serial.lib +index 2563b5f..efad054 100644 +--- a/src/serial/Makefile.serial.lib ++++ b/src/serial/Makefile.serial.lib +@@ -19,3 +19,5 @@ SRC = \ + LIB = xser + + WATCHERS = gouriano ++ ++DLL_LIB = xncbi xutil +diff --git a/src/serial/soap/Makefile.soap.lib b/src/serial/soap/Makefile.soap.lib +index e77d4ee..3b28bc4 100644 +--- a/src/serial/soap/Makefile.soap.lib ++++ b/src/serial/soap/Makefile.soap.lib +@@ -8,3 +8,5 @@ SRC = soap_message soap_readhook soap_writehook soap_client \ + LIB = xsoap + + WATCHERS = gouriano ++ ++DLL_LIB = xncbi xutil xser xconnect +diff --git a/src/serial/soap/Makefile.soap_server.lib b/src/serial/soap/Makefile.soap_server.lib +index c961496..0ccb2f0 100644 +--- a/src/serial/soap/Makefile.soap_server.lib ++++ b/src/serial/soap/Makefile.soap_server.lib +@@ -9,3 +9,5 @@ LIB = xsoap_server + REQUIRES = cgi + + WATCHERS = gouriano ++ ++DLL_LIB = xncbi xutil xcgi xsoap xser +diff --git a/src/serial/test/Makefile.we_cpp.lib b/src/serial/test/Makefile.we_cpp.lib +index 9877691..599ef5d 100644 +--- a/src/serial/test/Makefile.we_cpp.lib ++++ b/src/serial/test/Makefile.we_cpp.lib +@@ -3,3 +3,4 @@ SRC = we_cpp__ we_cpp___ + + WATCHERS = gouriano + ++DLL_LIB = xncbi xutil xser +diff --git a/src/sra/data_loaders/bam/Makefile.ncbi_xloader_bam.lib b/src/sra/data_loaders/bam/Makefile.ncbi_xloader_bam.lib +index 4896661..8e2ad56 100644 +--- a/src/sra/data_loaders/bam/Makefile.ncbi_xloader_bam.lib ++++ b/src/sra/data_loaders/bam/Makefile.ncbi_xloader_bam.lib +@@ -12,7 +12,7 @@ ASN_DEP = seqset seq + + LIB_OR_DLL = both + +-DLL_LIB = $(SOBJMGR_LIBS) bamread$(STATIC) $(BAM_LIBS) $(CMPRS_LIB) ++DLL_LIB = $(SOBJMGR_LIBS) bamread$(STATIC) $(BAM_LIBS) $(CMPRS_LIB) xobjreadex + LIBS = $(CMPRS_LIBS) $(ORIG_LIBS) + + CPPFLAGS = $(SRA_INCLUDE) -DNCBI_XLOADER_BAM_EXPORTS $(ORIG_CPPFLAGS) +diff --git a/src/sra/sdk/libs/align/Makefile.align-writer.lib b/src/sra/sdk/libs/align/Makefile.align-writer.lib +index f2a2f58..f61b25a 100644 +--- a/src/sra/sdk/libs/align/Makefile.align-writer.lib ++++ b/src/sra/sdk/libs/align/Makefile.align-writer.lib +@@ -6,7 +6,7 @@ LIB = align-writer + SRC = dna-reverse-cmpl reader-cmn reader-refseq refseq-mgr writer-cmn \ + writer-refseq writer-alignment writer-sequence writer-ref writer-reference + +-DLL_LIB = wvdb wkdb load kfg kfs klib $(Z_LIB) ++DLL_LIB = wvdb wkdb load kfg kfs klib kapp $(Z_LIB) + LIBS = $(Z_LIBS) $(ORIG_LIBS) + + CPPFLAGS = $(SRA_INCLUDE) $(SRA_INTERNAL_CPPFLAGS) -D_LIBRARY $(ORIG_CPPFLAGS) +diff --git a/src/util/Makefile.util.lib b/src/util/Makefile.util.lib +index f103ff1..829a71c 100644 +--- a/src/util/Makefile.util.lib ++++ b/src/util/Makefile.util.lib +@@ -14,3 +14,5 @@ PROJ_TAG = core + LIBS = $(ORIG_LIBS) + + WATCHERS = vakatov ++ ++DLL_LIB = xncbi +diff --git a/src/util/compress/api/Makefile.compress.lib b/src/util/compress/api/Makefile.compress.lib +index ae22234..2ce803a 100644 +--- a/src/util/compress/api/Makefile.compress.lib ++++ b/src/util/compress/api/Makefile.compress.lib +@@ -6,7 +6,7 @@ LIB = xcompress + + CPPFLAGS = $(ORIG_CPPFLAGS) $(CMPRS_INCLUDE) + +-DLL_LIB = $(BZ2_LIB) $(Z_LIB) $(LZO_LIB) ++DLL_LIB = $(BZ2_LIB) $(Z_LIB) $(LZO_LIB) xutil xncbi + LIBS = $(BZ2_LIBS) $(Z_LIBS) $(LZO_LIBS) + + WATCHERS = ivanov +diff --git a/src/util/qparse/Makefile.xqueryparse.lib b/src/util/qparse/Makefile.xqueryparse.lib +index a003930..0505da7 100644 +--- a/src/util/qparse/Makefile.xqueryparse.lib ++++ b/src/util/qparse/Makefile.xqueryparse.lib +@@ -7,3 +7,5 @@ query_parser_bison.tab.c : query_parser_bison.y + bison -v -p ncbi_q_ -o query_parser_bison.tab.c query_parser_bison.y + + WATCHERS = kuznets ++ ++DLL_LIB = xncbi xutil +diff --git a/src/util/regexp/Makefile.regexp.lib b/src/util/regexp/Makefile.regexp.lib +index 0f8d5e8..83a82af 100644 +--- a/src/util/regexp/Makefile.regexp.lib ++++ b/src/util/regexp/Makefile.regexp.lib +@@ -10,3 +10,5 @@ LIB = regexp + CPPFLAGS = -I$(includedir)/util/regexp -DHAVE_CONFIG_H $(ORIG_CPPFLAGS) + + WATCHERS = ivanov ++ ++DLL_LIB = xncbi xutil +diff --git a/src/util/sequtil/Makefile.sequtil.lib b/src/util/sequtil/Makefile.sequtil.lib +index c068a32..453c911 100644 +--- a/src/util/sequtil/Makefile.sequtil.lib ++++ b/src/util/sequtil/Makefile.sequtil.lib +@@ -4,3 +4,5 @@ LIB = sequtil + SRC = sequtil sequtil_convert sequtil_convert_imp sequtil_manip sequtil_tables sequtil_shared + + WATCHERS = shomrat ++ ++DLL_LIB = xncbi xutil +diff --git a/src/util/xregexp/Makefile.xregexp.lib b/src/util/xregexp/Makefile.xregexp.lib +index 965fac4..3accea3 100644 +--- a/src/util/xregexp/Makefile.xregexp.lib ++++ b/src/util/xregexp/Makefile.xregexp.lib +@@ -6,7 +6,7 @@ LIB = xregexp + + CPPFLAGS = $(ORIG_CPPFLAGS) $(PCRE_INCLUDE) + +-DLL_LIB = $(PCRE_LIB) ++DLL_LIB = $(PCRE_LIB) xutil xncbi + LIBS = $(PCRE_LIBS) + + WATCHERS = ivanov |