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Diffstat (limited to 'sci-biology/oases/oases-0.2.08.ebuild')
-rw-r--r--sci-biology/oases/oases-0.2.08.ebuild34
1 files changed, 34 insertions, 0 deletions
diff --git a/sci-biology/oases/oases-0.2.08.ebuild b/sci-biology/oases/oases-0.2.08.ebuild
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+++ b/sci-biology/oases/oases-0.2.08.ebuild
@@ -0,0 +1,34 @@
+# Copyright 1999-2016 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Id$
+
+EAPI=5
+
+inherit eutils
+
+DESCRIPTION="De novo transcriptome assembler"
+HOMEPAGE="http://www.ebi.ac.uk/~zerbino/oases"
+SRC_URI="http://www.ebi.ac.uk/~zerbino/oases/oases_0.2.08.tgz
+ http://www.ebi.ac.uk/~zerbino/oases/OasesManual.pdf"
+KEYWORDS=""
+
+LICENSE="GPL-3"
+SLOT="0"
+IUSE=""
+
+DEPEND=""
+RDEPEND="${DEPEND}
+ >=sci-biology/velvet-1.2.08"
+
+S="${WORKDIR}"/oases_0.2.8
+
+src_prepare(){
+ epatch "${FILESDIR}"/Makefile.patch
+ sed -e 's#cleanobj velvet oases doc#oases#' -i Makefile || die
+}
+
+src_install(){
+ dobin oases
+ dodoc README.md
+ dodoc "${DISTDIR}"/OasesManual.pdf
+}