aboutsummaryrefslogtreecommitdiff
diff options
context:
space:
mode:
Diffstat (limited to 'sci-biology/pb-jelly/pb-jelly-14.1.14.ebuild')
-rw-r--r--sci-biology/pb-jelly/pb-jelly-14.1.14.ebuild22
1 files changed, 22 insertions, 0 deletions
diff --git a/sci-biology/pb-jelly/pb-jelly-14.1.14.ebuild b/sci-biology/pb-jelly/pb-jelly-14.1.14.ebuild
new file mode 100644
index 000000000..0c659156f
--- /dev/null
+++ b/sci-biology/pb-jelly/pb-jelly-14.1.14.ebuild
@@ -0,0 +1,22 @@
+# Copyright 1999-2014 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+EAPI=5
+
+PYTHON_COMPAT=( python2_7 )
+
+inherit distutils-r1
+
+DESCRIPTION="Close gaps using PacBio RS or 454 FLX+ reads"
+HOMEPAGE="https://www.hgsc.bcm.edu/software/jelly"
+SRC_URI="http://sourceforge.net/projects/pb-jelly/files/PBJelly/PBJelly_14.1.14.tgz"
+
+LICENSE=""
+SLOT="0"
+KEYWORDS="~amd64"
+IUSE=""
+
+DEPEND="sci-biology/blasr
+ dev-python/networkx-1.1" # upstream says "Versions past v1.1 have been shown to have many issues."
+RDEPEND="${DEPEND}"