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Diffstat (limited to 'sci-biology/repeatmasker/repeatmasker-3.2.7.ebuild')
| -rw-r--r-- | sci-biology/repeatmasker/repeatmasker-3.2.7.ebuild | 54 |
1 files changed, 0 insertions, 54 deletions
diff --git a/sci-biology/repeatmasker/repeatmasker-3.2.7.ebuild b/sci-biology/repeatmasker/repeatmasker-3.2.7.ebuild deleted file mode 100644 index f98859159..000000000 --- a/sci-biology/repeatmasker/repeatmasker-3.2.7.ebuild +++ /dev/null @@ -1,54 +0,0 @@ -# Copyright 1999-2009 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 -# $Header: $ - -inherit versionator - -MY_PV=$(replace_all_version_separators '-') - -DESCRIPTION="Screen DNA sequences for interspersed repeats and low complexity DNA" -HOMEPAGE="http://repeatmasker.org/" -SRC_URI="http://www.repeatmasker.org/RepeatMasker-open-${MY_PV}.tar.gz" - -LICENSE="OSL-2.1" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="" - -DEPEND="" -RDEPEND="sci-biology/phrap - sci-biology/trf - >=sci-biology/repeatmasker-libraries-20090120" - -S="${WORKDIR}/RepeatMasker" - -src_compile() { - sed -i -e 's/system( "clear" );//' \ - -e 's|> \($rmLocation/Libraries/RepeatMasker.lib\)|> '${D}'/\1|' "${S}/configure" || die - echo " -env -/usr/share/${PN} -/usr/bin -1 -/usr/bin -Y -4" | "${S}/configure" || die "configure failed" - sed -i -e 's|use lib $FindBin::RealBin;|use lib "/usr/share/'${PN}'/lib";|' \ - -e 's|".*\(taxonomy.dat\)"|"/usr/share/'${PN}'/\1"|' \ - -e '/$REPEATMASKER_DIR/ s|$FindBin::RealBin|/usr/share/'${PN}'|' \ - "${S}"/{DateRepeats,ProcessRepeats,RepeatMasker,DupMasker,RepeatProteinMask,RepeatMaskerConfig.pm,Taxonomy.pm} || die -} - -src_install() { - dobin DateRepeats ProcessRepeats RepeatMasker DupMasker RepeatProteinMask - - dodir /usr/share/${PN}/lib - insinto /usr/share/${PN}/lib - doins "${S}"/*.pm - - insinto /usr/share/${PN} - doins -r util Matrices Libraries taxonomy.dat - keepdir /usr/share/${PN}/Libraries - - dodoc README INSTALL *.help -} |