diff options
Diffstat (limited to 'sci-biology/sambamba')
-rw-r--r-- | sci-biology/sambamba/Manifest | 1 | ||||
-rw-r--r-- | sci-biology/sambamba/metadata.xml | 15 | ||||
-rw-r--r-- | sci-biology/sambamba/sambamba-0.6.5.ebuild | 27 | ||||
-rw-r--r-- | sci-biology/sambamba/sambamba-9999.ebuild | 28 |
4 files changed, 0 insertions, 71 deletions
diff --git a/sci-biology/sambamba/Manifest b/sci-biology/sambamba/Manifest deleted file mode 100644 index c8fbec14b..000000000 --- a/sci-biology/sambamba/Manifest +++ /dev/null @@ -1 +0,0 @@ -DIST sambamba-0.6.5.tar.gz 249275 BLAKE2B a01b2863053838c1fe7151e7baf3041c1396ad547ec962d495b8c486cc6f0cdfcbd1cc5c6963795017dfd77e27a605462aa11fb7043dcf2f6ad666e64ad8bbef SHA512 a0353523bb921a32e4f7601d9c5552b2103567cfa23fb622b213170028122f49cb6929942e9a630890ddd93b7ebf00f048344edb75d5f2d10b1c86bae018497c diff --git a/sci-biology/sambamba/metadata.xml b/sci-biology/sambamba/metadata.xml deleted file mode 100644 index 3c6df6245..000000000 --- a/sci-biology/sambamba/metadata.xml +++ /dev/null @@ -1,15 +0,0 @@ -<?xml version="1.0" encoding="UTF-8"?> -<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd"> -<pkgmetadata> - <maintainer type="person"> - <email>mmokrejs@fold.natur.cuni.cz</email> - <name>Martin Mokrejs</name> - </maintainer> - <maintainer type="project"> - <email>sci-biology@gentoo.org</email> - <name>Gentoo Biology Project</name> - </maintainer> - <upstream> - <remote-id type="github">lomereiter/sambamba</remote-id> - </upstream> -</pkgmetadata> diff --git a/sci-biology/sambamba/sambamba-0.6.5.ebuild b/sci-biology/sambamba/sambamba-0.6.5.ebuild deleted file mode 100644 index ab2fb990e..000000000 --- a/sci-biology/sambamba/sambamba-0.6.5.ebuild +++ /dev/null @@ -1,27 +0,0 @@ -# Copyright 1999-2017 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -DESCRIPTION="Parallell process SAM/BAM/CRAM files faster than samtools" -HOMEPAGE="http://lomereiter.github.io/sambamba" -SRC_URI="https://github.com/lomereiter/sambamba/archive/v0.6.5.tar.gz -> ${P}.tar.gz" - -LICENSE="GPL-2+" -SLOT="0" -KEYWORDS="" -IUSE="debug" - -# https://github.com/ldc-developers/gentoo-overlay/tree/master/dev-lang/ldc2 -# -# contains bundled htslib -DEPEND="" -RDEPEND="${DEPEND}" - -src_compile(){ - if use debug ; then - emake sambamba-ldmd2-debug - else - emake sambamba-ldmd2-64 - fi -} diff --git a/sci-biology/sambamba/sambamba-9999.ebuild b/sci-biology/sambamba/sambamba-9999.ebuild deleted file mode 100644 index 8cd4c3ba2..000000000 --- a/sci-biology/sambamba/sambamba-9999.ebuild +++ /dev/null @@ -1,28 +0,0 @@ -# Copyright 1999-2017 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -inherit git-r3 - -DESCRIPTION="Parallell process SAM/BAM/CRAM files faster than samtools" -HOMEPAGE="http://lomereiter.github.io/sambamba" -EGIT_REPO_URI="https://github.com/lomereiter/sambamba.git" - -LICENSE="GPL-2+" -SLOT="0" -KEYWORDS="" -IUSE="debug" - -DEPEND="" -RDEPEND="${DEPEND}" - -# https://github.com/ldc-developers/gentoo-overlay/tree/master/dev-lang/ldc2 - -src_compile(){ - if use debug ; then - emake sambamba-ldmd2-debug - else - emake sambamba-ldmd2-64 - fi -} |