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-rw-r--r--sci-biology/sambamba/Manifest1
-rw-r--r--sci-biology/sambamba/metadata.xml15
-rw-r--r--sci-biology/sambamba/sambamba-0.6.5.ebuild27
-rw-r--r--sci-biology/sambamba/sambamba-9999.ebuild28
4 files changed, 0 insertions, 71 deletions
diff --git a/sci-biology/sambamba/Manifest b/sci-biology/sambamba/Manifest
deleted file mode 100644
index c8fbec14b..000000000
--- a/sci-biology/sambamba/Manifest
+++ /dev/null
@@ -1 +0,0 @@
-DIST sambamba-0.6.5.tar.gz 249275 BLAKE2B a01b2863053838c1fe7151e7baf3041c1396ad547ec962d495b8c486cc6f0cdfcbd1cc5c6963795017dfd77e27a605462aa11fb7043dcf2f6ad666e64ad8bbef SHA512 a0353523bb921a32e4f7601d9c5552b2103567cfa23fb622b213170028122f49cb6929942e9a630890ddd93b7ebf00f048344edb75d5f2d10b1c86bae018497c
diff --git a/sci-biology/sambamba/metadata.xml b/sci-biology/sambamba/metadata.xml
deleted file mode 100644
index 3c6df6245..000000000
--- a/sci-biology/sambamba/metadata.xml
+++ /dev/null
@@ -1,15 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<!DOCTYPE pkgmetadata SYSTEM "http://www.gentoo.org/dtd/metadata.dtd">
-<pkgmetadata>
- <maintainer type="person">
- <email>mmokrejs@fold.natur.cuni.cz</email>
- <name>Martin Mokrejs</name>
- </maintainer>
- <maintainer type="project">
- <email>sci-biology@gentoo.org</email>
- <name>Gentoo Biology Project</name>
- </maintainer>
- <upstream>
- <remote-id type="github">lomereiter/sambamba</remote-id>
- </upstream>
-</pkgmetadata>
diff --git a/sci-biology/sambamba/sambamba-0.6.5.ebuild b/sci-biology/sambamba/sambamba-0.6.5.ebuild
deleted file mode 100644
index ab2fb990e..000000000
--- a/sci-biology/sambamba/sambamba-0.6.5.ebuild
+++ /dev/null
@@ -1,27 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-DESCRIPTION="Parallell process SAM/BAM/CRAM files faster than samtools"
-HOMEPAGE="http://lomereiter.github.io/sambamba"
-SRC_URI="https://github.com/lomereiter/sambamba/archive/v0.6.5.tar.gz -> ${P}.tar.gz"
-
-LICENSE="GPL-2+"
-SLOT="0"
-KEYWORDS=""
-IUSE="debug"
-
-# https://github.com/ldc-developers/gentoo-overlay/tree/master/dev-lang/ldc2
-#
-# contains bundled htslib
-DEPEND=""
-RDEPEND="${DEPEND}"
-
-src_compile(){
- if use debug ; then
- emake sambamba-ldmd2-debug
- else
- emake sambamba-ldmd2-64
- fi
-}
diff --git a/sci-biology/sambamba/sambamba-9999.ebuild b/sci-biology/sambamba/sambamba-9999.ebuild
deleted file mode 100644
index 8cd4c3ba2..000000000
--- a/sci-biology/sambamba/sambamba-9999.ebuild
+++ /dev/null
@@ -1,28 +0,0 @@
-# Copyright 1999-2017 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=6
-
-inherit git-r3
-
-DESCRIPTION="Parallell process SAM/BAM/CRAM files faster than samtools"
-HOMEPAGE="http://lomereiter.github.io/sambamba"
-EGIT_REPO_URI="https://github.com/lomereiter/sambamba.git"
-
-LICENSE="GPL-2+"
-SLOT="0"
-KEYWORDS=""
-IUSE="debug"
-
-DEPEND=""
-RDEPEND="${DEPEND}"
-
-# https://github.com/ldc-developers/gentoo-overlay/tree/master/dev-lang/ldc2
-
-src_compile(){
- if use debug ; then
- emake sambamba-ldmd2-debug
- else
- emake sambamba-ldmd2-64
- fi
-}