diff options
Diffstat (limited to 'sci-biology/ssaha2-bin/ssaha2-bin-2.5.5-r1.ebuild')
| -rw-r--r-- | sci-biology/ssaha2-bin/ssaha2-bin-2.5.5-r1.ebuild | 38 |
1 files changed, 38 insertions, 0 deletions
diff --git a/sci-biology/ssaha2-bin/ssaha2-bin-2.5.5-r1.ebuild b/sci-biology/ssaha2-bin/ssaha2-bin-2.5.5-r1.ebuild new file mode 100644 index 000000000..2c0d5f63d --- /dev/null +++ b/sci-biology/ssaha2-bin/ssaha2-bin-2.5.5-r1.ebuild @@ -0,0 +1,38 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +inherit toolchain-funcs + +MY_PN="${PN%-bin}" +MY_P="${MY_PN}_v${PV}" + +DESCRIPTION="SSAHA2: Sequence Search and Alignment by Hashing Algorithm" +HOMEPAGE="https://www.sanger.ac.uk/tool/ssaha2-0/" +SRC_URI=" + x86? ( ftp://ftp.sanger.ac.uk/pub4/resources/software/${MY_PN}/${MY_P}_i686.tgz ) + amd64? ( ftp://ftp.sanger.ac.uk/pub4/resources/software/${MY_PN}/${MY_P}_x86_64.tgz ) + ftp://ftp.sanger.ac.uk/pub4/resources/software/ssaha2/samflag.c + ftp://ftp.sanger.ac.uk/pub4/resources/software/ssaha2/ssaha2-manual.pdf" + +LICENSE="all-rights-reserved" +SLOT="0" +KEYWORDS="~amd64 ~x86" + +QA_PREBUILT="*" + +src_unpack() { + default + use x86 && export S="${WORKDIR}"/${MY_P}_i686 + use amd64 && export S="${WORKDIR}"/${MY_P}_x86_64 +} +src_compile() { + $(tc-getCC) ${CFLAGS} ${LDFLAGS} -o samflag "${DISTDIR}"/samflag.c || die "Failed to compile samflags" +} + +src_install() { + dobin samflag ssaha2 ssaha2Build ssahaSNP + dodoc README "${DISTDIR}"/ssaha2-manual.pdf + einstalldocs +} |