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Diffstat (limited to 'sci-biology/subread/subread-2.0.3.ebuild')
-rw-r--r-- | sci-biology/subread/subread-2.0.3.ebuild | 33 |
1 files changed, 33 insertions, 0 deletions
diff --git a/sci-biology/subread/subread-2.0.3.ebuild b/sci-biology/subread/subread-2.0.3.ebuild new file mode 100644 index 000000000..624509aa5 --- /dev/null +++ b/sci-biology/subread/subread-2.0.3.ebuild @@ -0,0 +1,33 @@ +# Copyright 1999-2022 Gentoo Authors +# Distributed under the terms of the GNU General Public License v2 + +EAPI=8 + +DESCRIPTION="NGS suite for analysis of mapped reads, summary of exon/intron/gene counts" +HOMEPAGE="http://bioinf.wehi.edu.au/featureCounts/" # no https +SRC_URI="https://sourceforge.net/projects/subread/files/${P}/${P}-source.tar.gz" +S="${S}-source" + +LICENSE="GPL-3" +SLOT="0" +KEYWORDS="~amd64" + +DEPEND="sys-libs/zlib" +RDEPEND="${DEPEND}" + +src_prepare(){ + default + sed -e "s/-mtune=core2//g" -e "s/-O9//g" -i src/Makefile.Linux || die +} + +src_compile(){ + cd src || die + emake -f Makefile.Linux +} + +src_install(){ + dobin bin/[a-s]* bin/utilities/* + dodoc README.txt doc/SubreadUsersGuide.pdf + insinto /usr/share/subread + doins annotation/*.txt +} |