diff options
Diffstat (limited to 'sci-biology/trimmomatic/trimmomatic-0.38.ebuild')
| -rw-r--r-- | sci-biology/trimmomatic/trimmomatic-0.38.ebuild | 35 |
1 files changed, 0 insertions, 35 deletions
diff --git a/sci-biology/trimmomatic/trimmomatic-0.38.ebuild b/sci-biology/trimmomatic/trimmomatic-0.38.ebuild deleted file mode 100644 index bf01fd874..000000000 --- a/sci-biology/trimmomatic/trimmomatic-0.38.ebuild +++ /dev/null @@ -1,35 +0,0 @@ -# Copyright 1999-2018 Gentoo Foundation -# Distributed under the terms of the GNU General Public License v2 - -EAPI=6 - -inherit java-pkg-2 java-ant-2 - -DESCRIPTION="Illumina adapter trimming tool" -HOMEPAGE="http://www.usadellab.org/cms/?page=trimmomatic" -SRC_URI=" - http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/Trimmomatic-Src-${PV}.zip - http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/TrimmomaticManual_V0.32.pdf -> "${P}"_manual.pdf" - -# http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/Trimmomatic-0.32.zip - -LICENSE="GPL-3" -SLOT="0" -KEYWORDS="~amd64 ~x86" -IUSE="" - -DEPEND=">=virtual/jdk-1.6:* - dev-java/ant-core" -RDEPEND=">=virtual/jre-1.6:*" - -# somehow fails to build with oracle-jdk-bin-1.7 while ibm-jdk-bin-1.6 works - -EANT_BUILD_TARGET="dist" - -src_install() { - java-pkg_newjar "dist/jar/${P}.jar" "${PN}.jar" - insinto /usr/share/${PN}/Illumina - doins adapters/*.fa - insinto /usr/share/doc/${P} - dodoc "${DISTDIR}"/${P}_manual.pdf -} |