1 files changed, 0 insertions, 74 deletions
diff --git a/sci-biology/wgs-assembler/wgs-assembler-8.3_rc2.ebuild b/sci-biology/wgs-assembler/wgs-assembler-8.3_rc2.ebuild
deleted file mode 100644
index ce6d289c4..000000000
--- a/sci-biology/wgs-assembler/wgs-assembler-8.3_rc2.ebuild
+++ /dev/null
@@ -1,74 +0,0 @@
-# Copyright 1999-2018 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-EAPI=5
-
-PYTHON_COMPAT=( python2_7 )
-
-inherit eutils python-single-r1 toolchain-funcs
-
-MY_PV="${PV/_}" # convert from _rc2 to rc2
-
-DESCRIPTION="De novo whole-genome shotgun DNA sequence OLC assembler"
-HOMEPAGE="http://sourceforge.net/projects/wgs-assembler/"
-SRC_URI="http://sourceforge.net/projects/${PN}/files/${PN}/wgs-8.3/wgs-${MY_PV}.tar.bz2"
-
-LICENSE="GPL-2"
-SLOT="0"
-KEYWORDS="~amd64 ~x86"
-IUSE="static-libs"
-
-DEPEND="
-	x11-libs/libXt
-	!x11-terms/terminator"
-RDEPEND="${DEPEND}
-	app-shells/tcsh
-	dev-perl/Log-Log4perl
-	sci-biology/jellyfish:2"
-
-S="${WORKDIR}/wgs-${MY_PV}"
-
-src_prepare() {
-	epatch "${FILESDIR}"/${P}-rename-jellyfish.patch
-	tc-export CC CXX
-}
-
-src_configure() {
-	cd "${S}/kmer" || die
-	./configure.sh || die
-}
-
-src_compile() {
-	# not really an install target
-	emake -C kmer -j1 install
-	emake -C src -j1 SITE_NAME=LOCAL
-}
-
-src_install() {
-	OSTYPE=$(uname)
-	MACHTYPE=$(uname -m)
-	MACHTYPE=${MACHTYPE/x86_64/amd64}
-	MY_S="${OSTYPE}-${MACHTYPE}"
-	sed -i 's|#!/usr/local/bin/|#!/usr/bin/env |' $(find $MY_S -type f) || die
-
-	sed -i '/sub getBinDirectory ()/ a return "/usr/bin";' ${MY_S}/bin/runCA* || die
-	sed -i '/sub getBinDirectoryShellCode ()/ a return "bin=/usr/bin\n";' ${MY_S}/bin/runCA* || die
-	sed -i '1 a use lib "/usr/share/'${PN}'/lib";' $(find $MY_S -name '*.p*') || die
-
-	dobin kmer/"${MY_S}"/bin/*
-	insinto /usr/$(get_libdir)/"${PN}"
-	use static-libs && doins kmer/"${MY_S}"/lib/*
-
-	insinto /usr/include/"${PN}"
-	doins kmer/"${MY_S}"/include/*
-
-	insinto /usr/share/${PN}/lib
-	doins -r "${MY_S}"/bin/TIGR
-	rm -rf "${MY_S}"/bin/TIGR || die
-	dobin "${MY_S}"/bin/*
-	use static-libs && dolib.a ${MY_S}/lib/*
-	dodoc README
-
-	# drop bundled jellyfish-2.0.0
-	rm "${ED}"/usr/bin/jellyfish || die
-}