aboutsummaryrefslogtreecommitdiff
diff options
context:
space:
mode:
Diffstat (limited to 'sci-biology')
-rw-r--r--sci-biology/ANGLE-bin/Manifest2
-rw-r--r--sci-biology/Atlas-Link/Manifest2
-rw-r--r--sci-biology/Atlas/Manifest2
-rw-r--r--sci-biology/Atlas2/Manifest2
-rw-r--r--sci-biology/Atlas_GapFill/Manifest4
-rw-r--r--sci-biology/BBmap/Manifest10
-rw-r--r--sci-biology/BamView/Manifest2
-rw-r--r--sci-biology/DisEMBL/Manifest2
-rw-r--r--sci-biology/EBARDenovo/Manifest2
-rw-r--r--sci-biology/FLASH/Manifest2
-rw-r--r--sci-biology/GAL/Manifest2
-rw-r--r--sci-biology/Gambit/Manifest4
-rw-r--r--sci-biology/IMAGE/Manifest2
-rw-r--r--sci-biology/KaKs_Calculator/Manifest4
-rw-r--r--sci-biology/MaSuRCA/Manifest2
-rw-r--r--sci-biology/MeV/Manifest2
-rw-r--r--sci-biology/MolBioLib/Manifest2
-rw-r--r--sci-biology/MuSeqBox/Manifest2
-rw-r--r--sci-biology/NGSTools/Manifest2
-rw-r--r--sci-biology/ONTO-PERL/Manifest2
-rw-r--r--sci-biology/ORFcor/Manifest2
-rw-r--r--sci-biology/RADtools/Manifest4
-rw-r--r--sci-biology/RSeQC/Manifest4
-rw-r--r--sci-biology/Ray/Manifest2
-rw-r--r--sci-biology/SEECER/Manifest4
-rw-r--r--sci-biology/SPAdes/Manifest10
-rw-r--r--sci-biology/SSAKE/Manifest2
-rw-r--r--sci-biology/SnpEff/Manifest2
-rw-r--r--sci-biology/SolexaQA/Manifest2
-rw-r--r--sci-biology/TransDecoder/Manifest2
-rw-r--r--sci-biology/Trinotate/Manifest2
-rw-r--r--sci-biology/VarScan-bin/Manifest4
-rw-r--r--sci-biology/VarScan/Manifest2
-rw-r--r--sci-biology/VelvetOptimiser/Manifest2
-rw-r--r--sci-biology/YASRA/Manifest2
-rw-r--r--sci-biology/abacas/Manifest2
-rw-r--r--sci-biology/aghermann/Manifest2
-rw-r--r--sci-biology/align_to_scf/Manifest2
-rw-r--r--sci-biology/amos/Manifest2
-rw-r--r--sci-biology/ampliconnoise/Manifest6
-rw-r--r--sci-biology/arachne/Manifest2
-rw-r--r--sci-biology/argo-bin/Manifest4
-rw-r--r--sci-biology/argo/Manifest2
-rw-r--r--sci-biology/artemis/Manifest4
-rw-r--r--sci-biology/atsas/Manifest4
-rw-r--r--sci-biology/augustus/Manifest2
-rw-r--r--sci-biology/autoeditor/Manifest4
-rw-r--r--sci-biology/bam-readcount/Manifest2
-rw-r--r--sci-biology/bambus/Manifest4
-rw-r--r--sci-biology/barnacle/Manifest2
-rw-r--r--sci-biology/barrnap/Manifest4
-rw-r--r--sci-biology/beagle/Manifest8
-rw-r--r--sci-biology/beaglecall/Manifest6
-rw-r--r--sci-biology/bedops/Manifest2
-rw-r--r--sci-biology/bfast/Manifest2
-rw-r--r--sci-biology/bio-cd-hit-report/Manifest2
-rw-r--r--sci-biology/biobambam/Manifest2
-rw-r--r--sci-biology/bismark/Manifest2
-rw-r--r--sci-biology/blat/Manifest2
-rw-r--r--sci-biology/blue/Manifest10
-rw-r--r--sci-biology/brat/Manifest2
-rw-r--r--sci-biology/brat_bw/Manifest2
-rw-r--r--sci-biology/brat_nova/Manifest2
-rw-r--r--sci-biology/bru2nii/Manifest2
-rw-r--r--sci-biology/bx-python/Manifest2
-rw-r--r--sci-biology/caftools/Manifest4
-rw-r--r--sci-biology/cast-bin/Manifest2
-rw-r--r--sci-biology/cd-hit-auxtools/Manifest2
-rw-r--r--sci-biology/cd-hit/Manifest2
-rw-r--r--sci-biology/cdbfasta/Manifest2
-rw-r--r--sci-biology/cegma/Manifest2
-rw-r--r--sci-biology/cg-cat/Manifest2
-rw-r--r--sci-biology/clover/Manifest4
-rw-r--r--sci-biology/clview/Manifest4
-rw-r--r--sci-biology/codonw/Manifest4
-rw-r--r--sci-biology/conform-gt/Manifest2
-rw-r--r--sci-biology/conifer/Manifest2
-rw-r--r--sci-biology/consed2gap/Manifest2
-rw-r--r--sci-biology/coral/Manifest2
-rw-r--r--sci-biology/cortex_var/Manifest4
-rw-r--r--sci-biology/cramtools/Manifest2
-rw-r--r--sci-biology/cross_genome/Manifest2
-rw-r--r--sci-biology/cutadapt/Manifest2
-rw-r--r--sci-biology/dawg/Manifest2
-rw-r--r--sci-biology/deeptools/Manifest2
-rw-r--r--sci-biology/discrover/Manifest2
-rw-r--r--sci-biology/dna2pep/Manifest2
-rw-r--r--sci-biology/ePCR/Manifest2
-rw-r--r--sci-biology/edena/Manifest2
-rw-r--r--sci-biology/erpin/Manifest4
-rw-r--r--sci-biology/est2assembly/Manifest2
-rw-r--r--sci-biology/estscan/Manifest18
-rw-r--r--sci-biology/eugene/Manifest2
-rw-r--r--sci-biology/eval/Manifest4
-rw-r--r--sci-biology/fastdnaml/Manifest4
-rw-r--r--sci-biology/fastqc/Manifest2
-rw-r--r--sci-biology/fastx_toolkit/Manifest2
-rw-r--r--sci-biology/ffindex/Manifest2
-rw-r--r--sci-biology/fgap-bin/Manifest2
-rw-r--r--sci-biology/flexbar/Manifest4
-rw-r--r--sci-biology/fsa/Manifest2
-rw-r--r--sci-biology/fsl/Manifest4
-rw-r--r--sci-biology/full_lengther_next/Manifest2
-rw-r--r--sci-biology/gap2caf/Manifest4
-rw-r--r--sci-biology/gbench/Manifest2
-rw-r--r--sci-biology/geneid/Manifest2
-rw-r--r--sci-biology/genepop/Manifest2
-rw-r--r--sci-biology/generecon/Manifest2
-rw-r--r--sci-biology/genometools/Manifest2
-rw-r--r--sci-biology/genomeview-bin/Manifest2
-rw-r--r--sci-biology/germline/Manifest2
-rw-r--r--sci-biology/gfftools/Manifest4
-rw-r--r--sci-biology/gffutils/Manifest2
-rw-r--r--sci-biology/glean/Manifest2
-rw-r--r--sci-biology/gmap/Manifest2
-rw-r--r--sci-biology/grappa/Manifest2
-rw-r--r--sci-biology/hexamer/Manifest2
-rw-r--r--sci-biology/hisat2/Manifest2
-rw-r--r--sci-biology/hydra-sv/Manifest2
-rw-r--r--sci-biology/idba/Manifest2
-rw-r--r--sci-biology/igv/Manifest6
-rw-r--r--sci-biology/imagej/Manifest4
-rw-r--r--sci-biology/jannovar-bin/Manifest12
-rw-r--r--sci-biology/jellyfish/Manifest12
-rw-r--r--sci-biology/jigsaw/Manifest2
-rw-r--r--sci-biology/jtreeview-bin/Manifest4
-rw-r--r--sci-biology/jtreeview/Manifest4
-rw-r--r--sci-biology/karect/Manifest2
-rw-r--r--sci-biology/kat/Manifest2
-rw-r--r--sci-biology/khmer/Manifest4
-rw-r--r--sci-biology/kmergenie/Manifest2
-rw-r--r--sci-biology/last/Manifest2
-rw-r--r--sci-biology/lastz/Manifest2
-rw-r--r--sci-biology/libBigWig/Manifest2
-rw-r--r--sci-biology/libgtextutils/Manifest2
-rw-r--r--sci-biology/lucy/Manifest2
-rw-r--r--sci-biology/mRNAmarkup/Manifest2
-rw-r--r--sci-biology/manatee-igs/Manifest4
-rw-r--r--sci-biology/manatee-jcvi/Manifest2
-rw-r--r--sci-biology/mavid/Manifest2
-rw-r--r--sci-biology/merlin/Manifest2
-rw-r--r--sci-biology/metaseq/Manifest2
-rw-r--r--sci-biology/mgblast/Manifest2
-rw-r--r--sci-biology/mip-scaffolder/Manifest2
-rw-r--r--sci-biology/mira/Manifest4
-rw-r--r--sci-biology/miranda/Manifest2
-rw-r--r--sci-biology/mothur/Manifest2
-rw-r--r--sci-biology/mreps/Manifest2
-rw-r--r--sci-biology/mrfast/Manifest2
-rw-r--r--sci-biology/msautil/Manifest2
-rw-r--r--sci-biology/ncbi-blast+/Manifest6
-rw-r--r--sci-biology/ncbi-genome-download/Manifest2
-rw-r--r--sci-biology/ncbi-tools++/Manifest4
-rw-r--r--sci-biology/nesoni/Manifest2
-rw-r--r--sci-biology/nilearn/Manifest8
-rw-r--r--sci-biology/nitime/Manifest2
-rw-r--r--sci-biology/nrcl/Manifest4
-rw-r--r--sci-biology/nwalign/Manifest2
-rw-r--r--sci-biology/oases/Manifest4
-rw-r--r--sci-biology/pairagon/Manifest2
-rw-r--r--sci-biology/parafly/Manifest2
-rw-r--r--sci-biology/pb-jelly/Manifest2
-rw-r--r--sci-biology/perlprimer/Manifest2
-rw-r--r--sci-biology/phusion/Manifest2
-rw-r--r--sci-biology/phusion2/Manifest2
-rw-r--r--sci-biology/pileup/Manifest2
-rw-r--r--sci-biology/plinkseq/Manifest2
-rw-r--r--sci-biology/poretools/Manifest2
-rw-r--r--sci-biology/portrait/Manifest2
-rw-r--r--sci-biology/primerD/Manifest2
-rw-r--r--sci-biology/prinseq-lite/Manifest2
-rw-r--r--sci-biology/proda/Manifest2
-rw-r--r--sci-biology/prokka/Manifest2
-rw-r--r--sci-biology/prot4EST/Manifest2
-rw-r--r--sci-biology/psx/Manifest2
-rw-r--r--sci-biology/psychopy/Manifest6
-rw-r--r--sci-biology/pvmsx/Manifest4
-rw-r--r--sci-biology/pybedtools/Manifest2
-rw-r--r--sci-biology/pybrain/Manifest2
-rw-r--r--sci-biology/pyfaidx/Manifest2
-rw-r--r--sci-biology/pysamstats/Manifest2
-rw-r--r--sci-biology/pysurfer/Manifest4
-rw-r--r--sci-biology/quast/Manifest2
-rw-r--r--sci-biology/quicktree/Manifest2
-rw-r--r--sci-biology/quorum/Manifest4
-rw-r--r--sci-biology/reaper/Manifest2
-rw-r--r--sci-biology/reapr/Manifest4
-rw-r--r--sci-biology/repeatmasker/Manifest2
-rw-r--r--sci-biology/reptile/Manifest2
-rw-r--r--sci-biology/rmblast/Manifest2
-rw-r--r--sci-biology/rnaplex/Manifest2
-rw-r--r--sci-biology/roche454ace2caf/Manifest2
-rw-r--r--sci-biology/ruffus/Manifest2
-rw-r--r--sci-biology/rum/Manifest2
-rw-r--r--sci-biology/sailfish/Manifest2
-rw-r--r--sci-biology/salmon/Manifest8
-rw-r--r--sci-biology/sambamba/Manifest2
-rw-r--r--sci-biology/samstat/Manifest2
-rw-r--r--sci-biology/scaffold_builder/Manifest6
-rw-r--r--sci-biology/scan_for_matches/Manifest2
-rw-r--r--sci-biology/scbi_blast/Manifest2
-rw-r--r--sci-biology/scbi_fasta/Manifest2
-rw-r--r--sci-biology/scbi_fastq/Manifest2
-rw-r--r--sci-biology/scbi_mapreduce/Manifest2
-rw-r--r--sci-biology/scbi_plot/Manifest2
-rw-r--r--sci-biology/scbi_zcat/Manifest2
-rw-r--r--sci-biology/sclust/Manifest4
-rw-r--r--sci-biology/screed/Manifest2
-rw-r--r--sci-biology/seqclean/Manifest6
-rw-r--r--sci-biology/seqtools/Manifest2
-rw-r--r--sci-biology/sff_dump/Manifest2
-rw-r--r--sci-biology/sgp2/Manifest2
-rw-r--r--sci-biology/sickle/Manifest2
-rw-r--r--sci-biology/skewer-bin/Manifest4
-rw-r--r--sci-biology/smalt-bin/Manifest2
-rw-r--r--sci-biology/smalt/Manifest2
-rw-r--r--sci-biology/snap/Manifest2
-rw-r--r--sci-biology/snphylo/Manifest2
-rw-r--r--sci-biology/somatic-sniper/Manifest2
-rw-r--r--sci-biology/spm/Manifest4
-rw-r--r--sci-biology/sra_sdk/Manifest2
-rw-r--r--sci-biology/ssaha2-bin/Manifest8
-rw-r--r--sci-biology/stacks/Manifest2
-rw-r--r--sci-biology/staden/Manifest4
-rw-r--r--sci-biology/staden_doc/Manifest4
-rw-r--r--sci-biology/stringtie/Manifest2
-rw-r--r--sci-biology/subread/Manifest2
-rw-r--r--sci-biology/tablet-bin/Manifest2
-rw-r--r--sci-biology/tagdust/Manifest2
-rw-r--r--sci-biology/tclust/Manifest4
-rw-r--r--sci-biology/tigr-foundation-libs/Manifest2
-rw-r--r--sci-biology/trans-abyss/Manifest2
-rw-r--r--sci-biology/trf-bin/Manifest2
-rw-r--r--sci-biology/trf/Manifest6
-rw-r--r--sci-biology/trimmomatic/Manifest4
-rw-r--r--sci-biology/trinityrnaseq/Manifest2
-rw-r--r--sci-biology/trowel/Manifest2
-rw-r--r--sci-biology/twinscan/Manifest2
-rw-r--r--sci-biology/vague-bin/Manifest2
-rw-r--r--sci-biology/vcftools/Manifest2
-rw-r--r--sci-biology/velvetk/Manifest2
-rw-r--r--sci-biology/verifyBamID/Manifest4
-rw-r--r--sci-biology/wcd/Manifest6
-rw-r--r--sci-biology/weblogo/Manifest2
-rw-r--r--sci-biology/wgs-assembler/Manifest2
-rw-r--r--sci-biology/wise/Manifest2
-rw-r--r--sci-biology/zmsort/Manifest4
247 files changed, 354 insertions, 354 deletions
diff --git a/sci-biology/ANGLE-bin/Manifest b/sci-biology/ANGLE-bin/Manifest
index 14126167e..75edba305 100644
--- a/sci-biology/ANGLE-bin/Manifest
+++ b/sci-biology/ANGLE-bin/Manifest
@@ -1 +1 @@
-DIST ANGLE-bin-20080813.tar.gz 751280 SHA256 16b28ce6c590a3a9dcd7f237dce7ec6e329de7970ed8b84d9314d850c86a05fb SHA512 f2b5da17ce1a089cee307340231077855b091055b3f89dca88e03c746a9c58cbf222a3a09dc3dca235669f46a86b79544fc39299b8e94e642f64be6cd9736a0b WHIRLPOOL 1f434819787e6536919d32bbcd39a0b6c688d984c379e105caa790b83b807037999a0f1571ed31d65eaaf1f42a81a988438c64bd3f6257d53d08c0f226fb9eab
+DIST ANGLE-bin-20080813.tar.gz 751280 BLAKE2B 5a596a9ba8af2bc35db2aa3683e841cf3b77293dced3728822eeca0e552a9f36c878f65d769b04d9106607d5d2cc64b6dad0f7c2f13e5eed27c462333fec2150 SHA512 f2b5da17ce1a089cee307340231077855b091055b3f89dca88e03c746a9c58cbf222a3a09dc3dca235669f46a86b79544fc39299b8e94e642f64be6cd9736a0b
diff --git a/sci-biology/Atlas-Link/Manifest b/sci-biology/Atlas-Link/Manifest
index dda1875e8..3adee8c10 100644
--- a/sci-biology/Atlas-Link/Manifest
+++ b/sci-biology/Atlas-Link/Manifest
@@ -1 +1 @@
-DIST Atlas-Link-0.01.tar.gz 4212464 SHA256 5857beb6c8560c85b1271e12d28b00e4b93684357dfd2b49f61bfb78437046eb SHA512 ac3595ca81034de2eb2b4dc206e6e29c59fbb4fededfd2dee3b597ce47bc436907587fc59ac753d81c4ca0fc627e0a9961ebebd7bfcc002df634466c17fd2bce WHIRLPOOL 6788603eb7fd240c09de3f78a7b45a1d1494748ce006252905d469a36f27cc36f9fdc9c466a11ad6f02b92e208273ec95c12030eb1955d236c4685768392f0cc
+DIST Atlas-Link-0.01.tar.gz 4212464 BLAKE2B ab82fc21560ca1f04490df8e0c67df74f4c662965d6788f85c6306990f407cfb6bf48b74b1607c484445ea375ff397a9d11d2e5973376ee151c2948c7c52b5d0 SHA512 ac3595ca81034de2eb2b4dc206e6e29c59fbb4fededfd2dee3b597ce47bc436907587fc59ac753d81c4ca0fc627e0a9961ebebd7bfcc002df634466c17fd2bce
diff --git a/sci-biology/Atlas/Manifest b/sci-biology/Atlas/Manifest
index 176b0e2fb..4001534d5 100644
--- a/sci-biology/Atlas/Manifest
+++ b/sci-biology/Atlas/Manifest
@@ -1 +1 @@
-DIST atlas-src.tgz 645758 SHA256 d157d4ea77101925b648dd0ad8a22b9d58944df1ea5be19c9627ac200b344978 SHA512 12d31642fbab52ae06a681dda8a3aae675f8898f357e2ffa9a5d37933ad327bef157784fbe936076cba17d774187296b0b8b516eced48a45914bba879165b8d9 WHIRLPOOL 459a57ba1178e5a8df9506da1d6dc6e8a7afea4a3c67977804e066ef0453e434019c9cf10b16526c6e7cfb5b8b5a687d3f85cb84588c952eb9a7a30f66bbbcba
+DIST atlas-src.tgz 645758 BLAKE2B 2f0afa31dba2f10aaa6dd8e98248adb6eb1bad4c00a06553c27db9d8312b47266e34b1f38186f4e8d2da207220c633b2ec2a801fef4541c6f35d5d03bed86b9b SHA512 12d31642fbab52ae06a681dda8a3aae675f8898f357e2ffa9a5d37933ad327bef157784fbe936076cba17d774187296b0b8b516eced48a45914bba879165b8d9
diff --git a/sci-biology/Atlas2/Manifest b/sci-biology/Atlas2/Manifest
index 7ff57e14e..ad6a78081 100644
--- a/sci-biology/Atlas2/Manifest
+++ b/sci-biology/Atlas2/Manifest
@@ -1 +1 @@
-DIST Atlas2_v1.4.3.zip 979109 SHA256 6ed0f9cfee0b49c6b84643a071af05cb26d8bbcafa3d9a75cde20412d7884896 SHA512 bad8f4b4bb3b5e26e2d01e21a1bc1b3cd9b6ab77acf943892052f4f1632d13789919d857c211b1c657069a0672807bf5daa70fc78e0afce460013ad33fe0ddb5 WHIRLPOOL 7ef5f3807a8fcd83d7a16efde8b56ebea8382e5e73feca421f2f23b106c0d92d12c6e582ec941ca4b7df1bac5404480426ab99fa5d1765658e9bb8f2d7d85906
+DIST Atlas2_v1.4.3.zip 979109 BLAKE2B 5807adfbdac63520f750a0eeedca5d296391813e5eb6b5181bc2875982d6b5b85566ad3e7153f42737084053e3e07fd89a5c944723bc7f33e1d8b7f05164dda8 SHA512 bad8f4b4bb3b5e26e2d01e21a1bc1b3cd9b6ab77acf943892052f4f1632d13789919d857c211b1c657069a0672807bf5daa70fc78e0afce460013ad33fe0ddb5
diff --git a/sci-biology/Atlas_GapFill/Manifest b/sci-biology/Atlas_GapFill/Manifest
index 223223375..479998ee1 100644
--- a/sci-biology/Atlas_GapFill/Manifest
+++ b/sci-biology/Atlas_GapFill/Manifest
@@ -1,2 +1,2 @@
-DIST ATLAS_GapFill_V2.2_release.tar.bz2 467649030 SHA256 ded63bb953aaffb2f1f61bac64a2e7cac938cd0c5548bf2b7e6db6f07a05ad34 SHA512 7194cdc085d7a6157de91c3e7ea8968132c107917ae5a46abc05f53d6a8351ef310713108710cba1dc242646117b90a2bde18a99bc9cd08b6d265c8b8892dafd WHIRLPOOL e8ce70470b58a1b99525f35f7d5b2555269f8ec75089a98c3e8b627a3e3e36a0f8c92940e8dca7cbc90e9c50ef3cc2ec7ed910ae043f17b47298430c8f96a1b5
-DIST ATLAS_GapFill_V2_2.README 19029 SHA256 818d87ffc36396a31c2693ae80745d0a3d84b35d281e26bcbd90140a8970988f SHA512 fa3408884da4218890074c446317f6e163d657a450c941cb34c59f41f746586a20b11c4142a79fd963986d3e984f7e751d52bb285fa3a520fbe4c28ee84e8404 WHIRLPOOL 88d98894820e772f753756be9f9b63bb3c0bdb3066b959737ad1d028e0e0dc940b8af35847fab6d9c83194fa7835f78335496a2288d3242a0cce0251ae426314
+DIST ATLAS_GapFill_V2.2_release.tar.bz2 467649030 BLAKE2B 5d6f5942aeb031c4b546a84be8e60bd4e73cf01e5d4f9725ac4d63e31dca9e8cf4778dfcb06c5290c662e6656634c1dbe8a6c727091fcdb26eb0886e80b6faa8 SHA512 7194cdc085d7a6157de91c3e7ea8968132c107917ae5a46abc05f53d6a8351ef310713108710cba1dc242646117b90a2bde18a99bc9cd08b6d265c8b8892dafd
+DIST ATLAS_GapFill_V2_2.README 19029 BLAKE2B 38aa8b2fc3a9d01afe4a05a4dee2537d4554b13e7d7dd8d5468a58c5e64620d3d13afc22c8205d01737cd74d67f9e44e3eb1deb4fc4e8822e3a82598763a53d6 SHA512 fa3408884da4218890074c446317f6e163d657a450c941cb34c59f41f746586a20b11c4142a79fd963986d3e984f7e751d52bb285fa3a520fbe4c28ee84e8404
diff --git a/sci-biology/BBmap/Manifest b/sci-biology/BBmap/Manifest
index b90a3bcf5..7752e7d6b 100644
--- a/sci-biology/BBmap/Manifest
+++ b/sci-biology/BBmap/Manifest
@@ -1,5 +1,5 @@
-DIST BBMap_34.97.tar.gz 3986036 SHA256 46e9de558d5a7cb9f9db024ee59adaaee8fad28e5dbf1323cd619691f7ad8e53 SHA512 ddc43fe281af775946a8688805ec352431340a1e28ae0e8bd90dc8f2ef51435d03af73d3d90f2c0d04cf932d744acb43576bf89cd392e79f02393f9a6188598a WHIRLPOOL 21f73c14d4714024c7c68547da06037eef014e967c02ffc93f86887700366385d9edbfb67c67a648c314170bd2876c0ddb81e000c478138a706dd69f82e9d22a
-DIST BBMap_35.92.tar.gz 4481029 SHA256 d15b1e42537f2cd947c4f1941e2be5a7d3584d632da5c0a372c84efed3d72ccb SHA512 d9d43d40d8791826ad9d9a639a2cf9f08fd92460d37a19564ca460b9c5ace988c91052bb4e7c7ca49eb807efa2d3869153bdd5615df0f5900d623a3aae930dc5 WHIRLPOOL 544e6227321fd70529b0c49c1e2029061368b3909baf17d76b09cc44b5af48dbe36835b0f82bd97f29a20eda16e0c7f5efcd79026ed95cd3a7f0596cb0512d7e
-DIST BBMap_36.02.tar.gz 4545396 SHA256 05dcee9a3b89f665449b6e48b4828557d6474d00616c8c035d4f73e02efe0760 SHA512 4e960bd8d3b665333bbcd2c8f1b74e5b40a8172ef3b92f0512f1f9ea26cd83116f1284147e3f2e4f7340f7fb472159b47442c082336d3c45bf42ecb99f911fad WHIRLPOOL f4ba6bd9d7153b62f52a0f717074664ac943853ea1f1806cd80273cb9026a9cee1a4b4f5194f9a4b4135de85e0072c8c92c22a12366e6308ed49263d5e1c6e70
-DIST BBMap_36.86.tar.gz 5290221 SHA256 4f2fa2b139b67b57136e1b61df8de00d8b9fb75e1a1cdf5e5f28259a9743b6a8 SHA512 fc263572d8d3ecd8096594643cb4b955d48daf3c44538393c9f2f212838503ad00b5dfab969121e80091b1079752dd3e35428ca658959dd8549bda667396e8b0 WHIRLPOOL c503c3e77dba232547de792c6e219cb4275b4d0ec6806f5885abc03bc15e7bb2ebd683d4f5655dd16d3e480cb5b24799109388abc6f8abb3607454dcbe104115
-DIST BBMap_37.67.tar.gz 6697061 SHA256 1c5f163181461b90f81db3d127999563cfec907fa55a1e66ba8ccff7919ced78 SHA512 d2a945a9ada73d268ef3cb9bce26837e193b90701ce0c69b3214fa35b31f215d57db9c52fb654b0f75b233fdbfe86e3b3cf50b2035bf5c2c31afe7ea5ba975dd WHIRLPOOL 0090f541bd9a9c0ea154a28ccf3c7efaecf8db22199831eb329a3b09a8220dcd052643da0e829f7c464497dd8a3d3ab8c13791cff8a7f1b53000b2ceac2788a1
+DIST BBMap_34.97.tar.gz 3986036 BLAKE2B 79989c6c9444ed0e11dd460b06a9ed8f419f815d3b0ebf9face00bf0310c8e9fa8763bc652ac5393f25518144d220dd5a1d2e591df7300ecddcc9d039987c1b9 SHA512 ddc43fe281af775946a8688805ec352431340a1e28ae0e8bd90dc8f2ef51435d03af73d3d90f2c0d04cf932d744acb43576bf89cd392e79f02393f9a6188598a
+DIST BBMap_35.92.tar.gz 4481029 BLAKE2B 0d5dc2378a8d00ea4bf863e4dbc368d3edfc614b71d657ea1253f35b161b74617a1d39ae3615195bec4ceae9751786a85e4f6250cc5f75cfbceceea4068af48d SHA512 d9d43d40d8791826ad9d9a639a2cf9f08fd92460d37a19564ca460b9c5ace988c91052bb4e7c7ca49eb807efa2d3869153bdd5615df0f5900d623a3aae930dc5
+DIST BBMap_36.02.tar.gz 4545396 BLAKE2B 92fbea1acd387ab251f541e27113cffe0c703d0fef4c1ef81c8c0bef0e251a62bb9b67823a76957b835ee5af6860b9917821484004db64f37023d27bc139bf31 SHA512 4e960bd8d3b665333bbcd2c8f1b74e5b40a8172ef3b92f0512f1f9ea26cd83116f1284147e3f2e4f7340f7fb472159b47442c082336d3c45bf42ecb99f911fad
+DIST BBMap_36.86.tar.gz 5290221 BLAKE2B 6350f455f7af73f8f656ae9f1528b78131d9a602447011c1e9b73985ba1fc3796ca19f75b37d6bb5ba415c81a4460b96e26f2f8a995845caedccdb66a6afbc1a SHA512 fc263572d8d3ecd8096594643cb4b955d48daf3c44538393c9f2f212838503ad00b5dfab969121e80091b1079752dd3e35428ca658959dd8549bda667396e8b0
+DIST BBMap_37.67.tar.gz 6697061 BLAKE2B 9dc9dec257aab50867c4e5e20ddcfb0971f77ea643d087cc885e5677e413dceaac32a323944d95d4e08a0a9a9f9a625f76bbe6c7eed06bedc62cfdfad4d431c6 SHA512 d2a945a9ada73d268ef3cb9bce26837e193b90701ce0c69b3214fa35b31f215d57db9c52fb654b0f75b233fdbfe86e3b3cf50b2035bf5c2c31afe7ea5ba975dd
diff --git a/sci-biology/BamView/Manifest b/sci-biology/BamView/Manifest
index e60e70bec..57de2aae8 100644
--- a/sci-biology/BamView/Manifest
+++ b/sci-biology/BamView/Manifest
@@ -1 +1 @@
-DIST BamView_v1.2.11.jar 9844743 SHA256 68961478d515db4c9d1ef12cd82723e4245a69ddb38a2c94214dad5cf49621b4 SHA512 81f5eb4aea181a4e0c8262c63873d7d898484e3ba675af633b25d6363786d2b6b926e3f6ba5b7001ce22581167e1d6b7f8b058ee7c304f3ce1ac07bae5b5f78a WHIRLPOOL ce6243168e66c5f887dbd9e189b9a30b9ca28dacf38b27bb10ab2adf3984c08a2ba4c907c6fda8343b957eb34add8e7dc064be009212129cd909efff122cbff6
+DIST BamView_v1.2.11.jar 9844743 BLAKE2B 38981e8c03e74db01071e1b544c5f3b1865bbbb573250681dda162a1fd50092dc007e18558aa40753c98d01793109852c6ac720075423533d0ff1f6780a47df4 SHA512 81f5eb4aea181a4e0c8262c63873d7d898484e3ba675af633b25d6363786d2b6b926e3f6ba5b7001ce22581167e1d6b7f8b058ee7c304f3ce1ac07bae5b5f78a
diff --git a/sci-biology/DisEMBL/Manifest b/sci-biology/DisEMBL/Manifest
index 74f9e6ad5..26eb31cda 100644
--- a/sci-biology/DisEMBL/Manifest
+++ b/sci-biology/DisEMBL/Manifest
@@ -1 +1 @@
-DIST DisEMBL-1.4.tgz 626226 SHA256 34b1eb1f388f36a6d6ff208130f0ee4e368047fff7d70b40eaf7e4aa1660858c SHA512 3544324b9456f03f021b5cfeaaf8c168aa9ddb1862383b746fb52e44579c9774f0e8cc8552fe50f8662ad7fee8d37c731244cde44c3ee09ce574aab1401cca2f WHIRLPOOL c5b1dfdaeae61ecac6764abfe38ec9a0314ec0197ff58109ed0148d562b340bd7b93ef148b2ad91fbc02572002b5572aa861c9163980d62dc43e244e70a5d364
+DIST DisEMBL-1.4.tgz 626226 BLAKE2B 80cb7ead8239fae6bc46e2e422f953e34e7a017e5c1bc0d4994d142788fee8f882841e19c53c4805fb4def3529b71261b44194c17e8aec690682b778d616b3e6 SHA512 3544324b9456f03f021b5cfeaaf8c168aa9ddb1862383b746fb52e44579c9774f0e8cc8552fe50f8662ad7fee8d37c731244cde44c3ee09ce574aab1401cca2f
diff --git a/sci-biology/EBARDenovo/Manifest b/sci-biology/EBARDenovo/Manifest
index eb25f27cf..b1b00b49a 100644
--- a/sci-biology/EBARDenovo/Manifest
+++ b/sci-biology/EBARDenovo/Manifest
@@ -1 +1 @@
-DIST EBARDenovo-1.2.2-20130404.zip 8319322 SHA256 edeee238093963509d5da1cfe071d7471671fa51d7a910b83248eb5ec3abb4f6 SHA512 34b5b3942686da14f0dc55855ff2f2e8e321c3147adb3cb854e4abe13f3c3162e859af769ebf447917609a54bff816f1fb0a0fa61abbee7b4d7a61bee4e4b4f3 WHIRLPOOL a2aa17b514103fe0e8e5fc06c8f38ffe5a88ab059e1122f0666074ff04a4189619b4270f22103ce3f45dcb883eeeb714dc939ba660c22b05f069871107f8be8e
+DIST EBARDenovo-1.2.2-20130404.zip 8319322 BLAKE2B d11c8f22a5b766d34eb2f7fdde19781d5f478f14b43069c7ee18706a825c9e09ed6c8e864fa56bd1e3c03dba65beec0f42704b0442a542081c9d3863f66b1daf SHA512 34b5b3942686da14f0dc55855ff2f2e8e321c3147adb3cb854e4abe13f3c3162e859af769ebf447917609a54bff816f1fb0a0fa61abbee7b4d7a61bee4e4b4f3
diff --git a/sci-biology/FLASH/Manifest b/sci-biology/FLASH/Manifest
index 5463a00ce..7e3eca53f 100644
--- a/sci-biology/FLASH/Manifest
+++ b/sci-biology/FLASH/Manifest
@@ -1 +1 @@
-DIST FLASH-1.2.9.tar.gz 46870 SHA256 8d29a5183514b4db35ef246d01c932fddcf3231aeacec4c485e50a4b894342ba SHA512 2113c717d3e7043d98f6058eabc510f1df713c580b4e8374560e9d30bebe33b58dd0e0ab5c594cc10b70622721073ba370b80b9fef8f7db9d505d3a3d3a32ff5 WHIRLPOOL ad0ac60fe924c469e439a7f50652194a48b001be5cd5c8a9707048d652a7eaa2ece6d8a3ce271e53171f3fbd18f7cf329783aacc1bd24bf5861bc80076dfad09
+DIST FLASH-1.2.9.tar.gz 46870 BLAKE2B c3b0b2fd1b012f7f49651dac1c67c8e4d6f21dfb6faecb9c1be09b84e48b1cd91901926211db8f98359951c02387ad34bf0366d88b66d38483e093b2dbe2dc1f SHA512 2113c717d3e7043d98f6058eabc510f1df713c580b4e8374560e9d30bebe33b58dd0e0ab5c594cc10b70622721073ba370b80b9fef8f7db9d505d3a3d3a32ff5
diff --git a/sci-biology/GAL/Manifest b/sci-biology/GAL/Manifest
index 924d0e4cf..35e71f97e 100644
--- a/sci-biology/GAL/Manifest
+++ b/sci-biology/GAL/Manifest
@@ -1 +1 @@
-DIST GAL_0.2.2.tar.gz 108786594 SHA256 6bcb9a2333bbcd62af519a3241baa3a0af7c36fd131bdc1580281e46dc72182f SHA512 a90b396b7a703da875c2b7ad67a86f477f5b98e68353c94ab7d5876e613bfe386ba8f59d130c4f8fc62e2137742256e95ba9686c14f21b85b21d64fdc4c1be1b WHIRLPOOL 733da137871537aa2afb943fb2f898d133b3962ce1867b9e29427319da62a51bb7440535a8ae7ba7c31f8ccbad39270d7e182046e8274fdf75b3e8a5bff8e2f3
+DIST GAL_0.2.2.tar.gz 108786594 BLAKE2B c66a22d3623278317e9feb18938faea33bbb114df153e684bb2c6b1bf6c1c2a13c6bd3306497d80ff066fa65301fdde74e70dc33f73757e9f4bf34074e145780 SHA512 a90b396b7a703da875c2b7ad67a86f477f5b98e68353c94ab7d5876e613bfe386ba8f59d130c4f8fc62e2137742256e95ba9686c14f21b85b21d64fdc4c1be1b
diff --git a/sci-biology/Gambit/Manifest b/sci-biology/Gambit/Manifest
index f22f3245b..0c91ff6b9 100644
--- a/sci-biology/Gambit/Manifest
+++ b/sci-biology/Gambit/Manifest
@@ -1,2 +1,2 @@
-DIST GambitDocumentation_v0.4.145.pdf 1061985 SHA256 f0d28fedab07007244a2a6f6292b7c445843a336878583ae177c22528ede30c9 SHA512 c16c1928a9c4edb31204a43d206328a34090ca7b4d2cefb0999f93d6e559f84773b515ac2972350739f9f5f0d45e54b3b584c763f25de1b5464eca4a0ba03a57 WHIRLPOOL 8d78b5bd7bfe0a8ccb9b249bdf92d9bcc6bc2e350382c8c001753176d39f53b7e23322e3b897bec597631c35f9d969796277d494a90c876b11dfbe4fd71f9371
-DIST Gambit_v0.4.145_src.tar.gz 246624 SHA256 1c1ed7fdb3b9a5007f2daeef2b96033d7145a767dd526339dbb928dd27626268 SHA512 5fd650acc6acbfdf5dbb085b7a641883bf833aa0c7c156a7358675cc35f71f2dc1cc82c25b651df56a99f43015eda14574167252703c84a22f792e9df52ee501 WHIRLPOOL e7da4f63b0a6771d816f76fa0a6482c985c4b7015ca288106f04e4587cc50bba26719236d0e3d79c1b9085cfad4634c52eea359d880d7af2eac4bb98ded004e1
+DIST GambitDocumentation_v0.4.145.pdf 1061985 BLAKE2B e86a646fddd1c6ff15e0d3739cd759ca3321feadfeca5ce1c65b299d52621771dbdfbeaa1c6f4a3f8de8216f25a50d1b6f49af47ebb3522c5d2c273042ceb44b SHA512 c16c1928a9c4edb31204a43d206328a34090ca7b4d2cefb0999f93d6e559f84773b515ac2972350739f9f5f0d45e54b3b584c763f25de1b5464eca4a0ba03a57
+DIST Gambit_v0.4.145_src.tar.gz 246624 BLAKE2B 91a01dbc29c2e27d69b95494be59b202bcbd2075ac3bffb9b43f8dddccd54aca88fa29254df8ed471c1f1b3d9c988f86d0e48e4706654369f6fe78afd3c1802b SHA512 5fd650acc6acbfdf5dbb085b7a641883bf833aa0c7c156a7358675cc35f71f2dc1cc82c25b651df56a99f43015eda14574167252703c84a22f792e9df52ee501
diff --git a/sci-biology/IMAGE/Manifest b/sci-biology/IMAGE/Manifest
index df49e5404..4134ec214 100644
--- a/sci-biology/IMAGE/Manifest
+++ b/sci-biology/IMAGE/Manifest
@@ -1 +1 @@
-DIST IMAGE_version2.4.1_64bit.zip 2717440 SHA256 f9e4875f77d06d4d833ea10dbf2123e94aa8624c135df9d59d5cbb1492e55bfa SHA512 8fd755107509f6da10809fc4d353744dd985aa079d30d4eccefb3938e106d2fdf264060e5fbfefedbf47df5dd5aa5b28d9545a9c54bc86c19ce99854cbb0dc7d WHIRLPOOL c5630aae2d728b4ff9c28fba0a3d35a1e61fe79a13d84a9d773614fce00e9b00b2ff3e3d679437ae46505571f1220668bd9bb9fa27bfeea63668135233753a31
+DIST IMAGE_version2.4.1_64bit.zip 2717440 BLAKE2B 541362b54cbdf860cbdda6b5ddb90fc36a84d492944b16992aa947068bfad7efe8a6ab550374768f56df7e1a50f6a1f13f5cbd646f7ba405d21c3b280b954af0 SHA512 8fd755107509f6da10809fc4d353744dd985aa079d30d4eccefb3938e106d2fdf264060e5fbfefedbf47df5dd5aa5b28d9545a9c54bc86c19ce99854cbb0dc7d
diff --git a/sci-biology/KaKs_Calculator/Manifest b/sci-biology/KaKs_Calculator/Manifest
index 778eb13c0..c39605893 100644
--- a/sci-biology/KaKs_Calculator/Manifest
+++ b/sci-biology/KaKs_Calculator/Manifest
@@ -1,2 +1,2 @@
-DIST KaKs_Calculator1.2.tar.gz 2301729 SHA256 92b7f7bdd1b090b5f16e83968263e1e58886cdb7fe832e2dfd0a636bdfd4840a SHA512 a1a18229d89262425f879695a1f44ebecbe473c32bcf7ee0d2a2d5d36d34a45b88f5fdcedbacdf0070eb5f0feedff9d74616849aff3cf44f210fdbc65ed56e2c WHIRLPOOL 54a36ba47473342953f5d80aae6e8b2abe5d8e296b381222a15bbb86815931a7a79c5bedf4d261a63ab9776da3b11545adfb2edba04fb61e6a4e0e06feb158e7
-DIST parseFastaIntoAXT.pl 1483 SHA256 4cd376404e93647343ba23d48496d2e275ae82bfbeff6ae6f224145e3d74e382 SHA512 38d39d0fe1f788cf45d742e9fd6b0918a78973faecdb10d98d39384670abdef7212dbd2cdea777f0d5fcbbf202f5331f9fe178ef0f48fafe9e0a31625ab532a1 WHIRLPOOL cdd50eb4a228f88886a5810a4274806cb8514b79d49e8ded63c3d602f3f95f383958730f897470461cd6db2b73b3db2535cbca8449089ea81c80df7224bf42e1
+DIST KaKs_Calculator1.2.tar.gz 2301729 BLAKE2B d8d7812d61b26bce8868e9de59511c0d119c43f725d1f5b4bfbf2b7cddd3c3844e348c9003126ddaff4b0d3d0a0ada2ce1733cda0b1129b7b801114eaaf74f86 SHA512 a1a18229d89262425f879695a1f44ebecbe473c32bcf7ee0d2a2d5d36d34a45b88f5fdcedbacdf0070eb5f0feedff9d74616849aff3cf44f210fdbc65ed56e2c
+DIST parseFastaIntoAXT.pl 1483 BLAKE2B 5fb82e508bd277cdf1df1b3df63e3449c9569d3334db8f1a259ef69fe45981b40265290c92ba6120b2463809830641878e2cb207118b7dbfc163fad9869e62d9 SHA512 38d39d0fe1f788cf45d742e9fd6b0918a78973faecdb10d98d39384670abdef7212dbd2cdea777f0d5fcbbf202f5331f9fe178ef0f48fafe9e0a31625ab532a1
diff --git a/sci-biology/MaSuRCA/Manifest b/sci-biology/MaSuRCA/Manifest
index b18db4ab7..f15817f90 100644
--- a/sci-biology/MaSuRCA/Manifest
+++ b/sci-biology/MaSuRCA/Manifest
@@ -1,2 +1,2 @@
DIST MaSuRCA-3.2.2.tar.gz 23269939 SHA256 b0535e9cca6fa3699290d5a31f3d30b6270ba3c75f8197d8bd142ba81eed5202 SHA512 274184de19e20e7e6eb31bdd62f69e02ea77657da1821207edb5c0f3a9c0d829426d14e4551d594411a17ca2ae8fdc81c3b2b19ae6c3978b641e60b8a80a2032 WHIRLPOOL 7e24c3150771083ed5cf9792c98db9db79d3b25178e693c5de93899f6bf028cc90b15027b6e68bbf36e4fff60010351db2cee6f60d5e5248b66eb308298021f8
-DIST MaSuRCA_QuickStartGuide.pdf 152644 SHA256 3a1e9fa83608f6138355aa0e6c5b1db337e2fca67d0a7275c0b54e85780e421d SHA512 e911a7b092f68a1f60e45c996e25b53b65260fad9e465488d30a066b00db2cdef0e0bb422d9731d37cfa3958eac74943d54019ac9e538560b66da0a64d6ce800 WHIRLPOOL a7d1ef0798b0ee0810b0fe6ac6bda4e0b6f4655a7109d5dc5dfc797ed6669ad5353a2f3b988e9efe1dcde485dc69bdc2b1d3887ee2d026e99cf8a14fe4075a95
+DIST MaSuRCA_QuickStartGuide.pdf 153680 BLAKE2B 608a7f962fbec2982626f14a0fe3d7c7aa8e57582b9366c48e8981706edadce44f304f3addecb1f4f556de9fdd57500760a82bd9e00a85d34e7f35a3d003a8d4 SHA512 d887c36ec30cb89ecbde73517055592fd370721bb8945f293c508d0ca6851160326bf2d2b3ade89324611ea5d4bc238068f422df4c5693672623961383635f24
diff --git a/sci-biology/MeV/Manifest b/sci-biology/MeV/Manifest
index 32b95ec1c..0a8f99e09 100644
--- a/sci-biology/MeV/Manifest
+++ b/sci-biology/MeV/Manifest
@@ -1 +1 @@
-DIST MeV_4_8_1_r2727_linux.tar.gz 81391795 SHA256 2e68cc274ae787603738e9babd171329193bb8dd9b2fb6c5bbe66fbd60ffc711 SHA512 60a6a17fefbbb57f50d97edf23f2c69aae5c9423400aecf9d1f4d19374356637d52aee53e63e87d65a02ef19d8bd3ca08b63c783ec483ab0214e01a5ea71c7ce WHIRLPOOL 94a79193b6718d2828ffbf99235a4d030a729dfdfae037d8e5f3d6a6933776dc345c9d5ed511d5a4c8c23c6ee9c700d88e1e848730e4fdcf76e3791eca657622
+DIST MeV_4_8_1_r2727_linux.tar.gz 81391795 BLAKE2B ef3010a8116ce9b23f7dc2a84de26aa08f26a541b2e07f45d57ffd6b489172eaa51e273b43b964e4ddc64b62f6594ef15030818862be2b67d948d6fae812b5a0 SHA512 60a6a17fefbbb57f50d97edf23f2c69aae5c9423400aecf9d1f4d19374356637d52aee53e63e87d65a02ef19d8bd3ca08b63c783ec483ab0214e01a5ea71c7ce
diff --git a/sci-biology/MolBioLib/Manifest b/sci-biology/MolBioLib/Manifest
index 63714ecca..fcfe68414 100644
--- a/sci-biology/MolBioLib/Manifest
+++ b/sci-biology/MolBioLib/Manifest
@@ -1 +1 @@
-DIST MolBioLib_public.version5.tar.gz 2414384 SHA256 694a5682a09caea46dc531bb48a68817873633a31aa92177eb2ba0a253a38eb9 SHA512 056c38bcb65b845b32678fb8c5d758023154c07085414194e98e58281e61e475dca7321c8d684955c88bf459bc92c9d39f8b6091d0b804581e6f6e6ecabe3832 WHIRLPOOL 6d089274ed3f505eb887536b5a4d46e5bbb82951c27fbf684fb820605a6fb416a7e888c9d1a613cb29a3cf5a2b43a192a0781f56a769b793a8986097d2411e43
+DIST MolBioLib_public.version5.tar.gz 2414384 BLAKE2B 845ac366ed41886cc0d3d96376dc9a97bae3d84bfc41d5f9e5be4fa274a6d64a981fcbcc12de28e1518212313af12330b08cac5488e7db9a2738c7846b981cb7 SHA512 056c38bcb65b845b32678fb8c5d758023154c07085414194e98e58281e61e475dca7321c8d684955c88bf459bc92c9d39f8b6091d0b804581e6f6e6ecabe3832
diff --git a/sci-biology/MuSeqBox/Manifest b/sci-biology/MuSeqBox/Manifest
index 99a0a28dc..4b2bfab1f 100644
--- a/sci-biology/MuSeqBox/Manifest
+++ b/sci-biology/MuSeqBox/Manifest
@@ -1 +1 @@
-DIST MuSeqBox-4-8-2015.tar.gz 86427 SHA256 b52aa769881e647253bf9119c23980b2bc3e6da350fd8a605825dab67ec2766b SHA512 09644994e682ed6e7307f950ec61e78e8dff7cdba5d70324b8529f33ed9339481f647fd3f45eb272ffa941afa6138a23a26769651dd4c22e3a1a16d2275d14b8 WHIRLPOOL 3d9250cbc558ec44c5cbab229214b50012092baf31e84f04962790f4e2642c451fe2d78d28d93f34386733b729dfc20f7d9a0c677ed5716c939f8f403a6fa2e5
+DIST MuSeqBox-4-8-2015.tar.gz 86427 BLAKE2B 5152da22a0fdf4694e9a3bea51d95e819d06bf9d27863d9af04bdc1159eec42f90f7eaab426c8e9b3db3988e6da34bfaff4ea9d6d5feb9b07ccc39e0d27af99a SHA512 09644994e682ed6e7307f950ec61e78e8dff7cdba5d70324b8529f33ed9339481f647fd3f45eb272ffa941afa6138a23a26769651dd4c22e3a1a16d2275d14b8
diff --git a/sci-biology/NGSTools/Manifest b/sci-biology/NGSTools/Manifest
index 672d702e8..09d9be941 100644
--- a/sci-biology/NGSTools/Manifest
+++ b/sci-biology/NGSTools/Manifest
@@ -1 +1 @@
-DIST NGSTools_2.0.5.tar.gz 1366288 SHA256 8f6b2d4d410426c958fafa9634c0b2ce6f426b352942e79796c57fd30f400594 SHA512 05ef3bf3aac397aa4a471ed86a35f279cb97f8af9f827881751a0f3b11612d683724ece5d24a9848978a1a88f75aa102ee2765d5204f65b7a94da3149412bfa4 WHIRLPOOL d90f564a63c51cfbe9be7253555fe346e909691b578dd57a9c667340b18fbfaf9aff6d3916082b7469ec6cfce3f4afbe6f34adf49e7445fc25264d9c9c91eae8
+DIST NGSTools_2.0.5.tar.gz 1366288 BLAKE2B 8cf11e3824a37634072c42d031d1753b55a2ac56e771f8f962b22ed9d20904f8c07856009e6bbb8c1677d0bb91a37c1dca30d0aa77c0ff63b392dfdd02b4823a SHA512 05ef3bf3aac397aa4a471ed86a35f279cb97f8af9f827881751a0f3b11612d683724ece5d24a9848978a1a88f75aa102ee2765d5204f65b7a94da3149412bfa4
diff --git a/sci-biology/ONTO-PERL/Manifest b/sci-biology/ONTO-PERL/Manifest
index c43cfb91c..b3a2be6db 100644
--- a/sci-biology/ONTO-PERL/Manifest
+++ b/sci-biology/ONTO-PERL/Manifest
@@ -1 +1 @@
-DIST ONTO-PERL-1.41.tar.gz 724171 SHA256 0aad6f898f927a8d3e80f685c0065019a132759b6876864ebc9a3e0c94767c09 SHA512 cff9601ac55cf0c46b1a820c9b93d82d48683081491667d132b4806597c46280fd977e565cb9ca43ec230e3ac9371987a90d167ac2f1fa297ab34f5fa080395e WHIRLPOOL 68213a67e4ec59fa4de72e3743951f1f9c7adaf08971ce8de369c1800c4805bf6d94bf1c50deded193336180a495208ea747d9adfee932452ab8753d5f4650a0
+DIST ONTO-PERL-1.41.tar.gz 724171 BLAKE2B 71f3f966ee62bf97412790981de7fe9dc726468cd0eb9a9f92cb33d015a82b611c1bf5ff8ee47f8070783183c4945a18d11e5d243c6cacef1496d414915ada23 SHA512 cff9601ac55cf0c46b1a820c9b93d82d48683081491667d132b4806597c46280fd977e565cb9ca43ec230e3ac9371987a90d167ac2f1fa297ab34f5fa080395e
diff --git a/sci-biology/ORFcor/Manifest b/sci-biology/ORFcor/Manifest
index 881c8d80d..43ecf7822 100644
--- a/sci-biology/ORFcor/Manifest
+++ b/sci-biology/ORFcor/Manifest
@@ -1 +1 @@
-DIST ORFcor.tar.gz 3499343 SHA256 32609f3a0ceebfc98eba4987b57ccabeb52fb8c4f7ec26bc2a9c4ba1839b09bc SHA512 2a0c57e94a71294f115c769aced754e8e3f6d0f8ad2b577add8f65f9f45fed2486946244ea99109dbac7dfcaf3bae1a14ebe4d6ffb194c285675e361ddd12141 WHIRLPOOL 94d48efc48b372733466f594ed7e9fb3ce4a531636f38e20cb7328c91c600ad70cd7e611fa1cd6514272273526a2c472b920b089b3380c5fb1eaa887dad2ec52
+DIST ORFcor.tar.gz 3499343 BLAKE2B 5ebeb3614496d37f22d79c3d8d1f0bbabec7c16d834dbc60994f35fa9849050409a42e48955d695de2518c1ab33f071c03eb4d060efff21160040e807ceb1801 SHA512 2a0c57e94a71294f115c769aced754e8e3f6d0f8ad2b577add8f65f9f45fed2486946244ea99109dbac7dfcaf3bae1a14ebe4d6ffb194c285675e361ddd12141
diff --git a/sci-biology/RADtools/Manifest b/sci-biology/RADtools/Manifest
index 5342bb6b0..b6ae8f0c8 100644
--- a/sci-biology/RADtools/Manifest
+++ b/sci-biology/RADtools/Manifest
@@ -1,2 +1,2 @@
-DIST RADmanual.pdf 90937 SHA256 47d9931f7742eb7a2a42fa78f719176f0da8aadff42260f6ae3a4430664dc9e7 SHA512 4647edd9f14c59484ed04cbcdff3c99b841f169ea41a3ed678c28b6dd5f228cbc88d94f3f75bb5abbba2604cae7aefc2b77960178b4d7868e48c6717f90d08e1 WHIRLPOOL a2aaec0ff5b116cd544bba9e56c029bc5193f320789e098209880dbb967e7bc8c65094f375564679ee8cb0d5689c04000cd2b053349980fd36b3ae39da06b56f
-DIST RADtools_1.2.4.tar.gz 125243 SHA256 8162037847a54bbc9f55c110ad0fcd1b1b70bac416a05e90324e4be0299ff7ea SHA512 556323e8debadac6f5607ff639bbd5c73dc0a070a88c1d257fae06215a40cb4b615455a118cb7f5dab7a1a4a9a09d0c0138c02290f3c1e5eba41be11e47b5bbf WHIRLPOOL b75d3a9a2c96921be3972f0d85241cb5058bc6533b6687a4dbf5b0387af064da90c129a4baa2a563dff58089cc5baf5a43a75042adc6fd2d003319a57d254ce2
+DIST RADmanual.pdf 90937 BLAKE2B f757c3d9d1a2d34f09fb394ebbfbdca06d59dbb2fd2c8110299cb43f1edb50b41f9be582124c7b74544e53bdb683ca5f95855540ceb281d4a843638158ae3825 SHA512 4647edd9f14c59484ed04cbcdff3c99b841f169ea41a3ed678c28b6dd5f228cbc88d94f3f75bb5abbba2604cae7aefc2b77960178b4d7868e48c6717f90d08e1
+DIST RADtools_1.2.4.tar.gz 125243 BLAKE2B 0159e63e3db583b97504b94bec965a0807283e81c5502b2cbc03cdd09c9d277900f03951d173d73ddfc05139e2716c9ea20712d86e3996d01805182485a3212d SHA512 556323e8debadac6f5607ff639bbd5c73dc0a070a88c1d257fae06215a40cb4b615455a118cb7f5dab7a1a4a9a09d0c0138c02290f3c1e5eba41be11e47b5bbf
diff --git a/sci-biology/RSeQC/Manifest b/sci-biology/RSeQC/Manifest
index 6852e051a..4fac5c0d9 100644
--- a/sci-biology/RSeQC/Manifest
+++ b/sci-biology/RSeQC/Manifest
@@ -1,2 +1,2 @@
-DIST RSeQC-2.6.1.tar.gz 1654756 SHA256 600c09fb5c85e6249030f019949a6e0e131230008fde363f1603444f8a009e96 SHA512 9adf44be989764c4095e91a4de76d5d96842956ff855392c11d644f99010c2e06ded80ab2373e636e59f544fb508839ea6d4ed6e202695ff31c42a68c1ceb86b WHIRLPOOL 9a4778a4f7c84ad7ee44a00149e09ad3c560a1dffc5e9be1edc810f69bc14c7e3bb184213434899eb8c4b0c98c227b31108c60b9615beb807d38a66349c4f0e6
-DIST fetchChromSizes 2695 SHA256 a349673d472edb2842298b6be1c13703c20e29d7a1dfd317f018b7e1d55f5ddc SHA512 23405beabb4f42b5cc5b569d9948d070e354ef2be10030b51ba3510865ab4e25bee8aab7283d9b6cbd7df454159a6f89e58ad8f5ee6a541046ad5a72f65019e8 WHIRLPOOL dc6b4d90e49db600ba83a7f60f3aa1665a4deb9cc016ceae3d9ccaa8a452965f4474c0550c0199d9b2f64c7805251943337f1c0691497539358751a41348005c
+DIST RSeQC-2.6.1.tar.gz 1654756 BLAKE2B 401ffe1f45c685339bb39378d9b318e366eac1598eccec1eb5249ecf17f7da522f939569fe6ea211a12bdbbf75b550944c347a8fc530f6dbc2f95f6f5cbe86f9 SHA512 9adf44be989764c4095e91a4de76d5d96842956ff855392c11d644f99010c2e06ded80ab2373e636e59f544fb508839ea6d4ed6e202695ff31c42a68c1ceb86b
+DIST fetchChromSizes 2695 BLAKE2B a41f8e0085121f097c0fe93922b221b276f00a5d6af1da76f347ca121882e5d899d482900f51a0da4bff22b0b3158f0e274a67c60d7b7499c1bc3ead96beccd6 SHA512 23405beabb4f42b5cc5b569d9948d070e354ef2be10030b51ba3510865ab4e25bee8aab7283d9b6cbd7df454159a6f89e58ad8f5ee6a541046ad5a72f65019e8
diff --git a/sci-biology/Ray/Manifest b/sci-biology/Ray/Manifest
index d2b192e19..756a824dd 100644
--- a/sci-biology/Ray/Manifest
+++ b/sci-biology/Ray/Manifest
@@ -1 +1 @@
-DIST Ray-2.3.0.tar.bz2 444056 SHA256 c310095c38f5fdb516e232fdd40ed971df89ecb9f5e5447a1bf4693cdaaf2816 SHA512 91305e6ab0c6de668ba878965dcef14b02010873bcc494d20200850357bf74f07f60c1d7a15f4e5f53a266b0b2528566bd429335eaba85445b50ab396595eb87 WHIRLPOOL d5ddc521f51db50d0a7673fce7281dadba5c455456d1ad46195df3061ae22b9e58f22b1db618181bd81602f344208bcaa4be300956f7deddb958b7b6a0a0bd4c
+DIST Ray-2.3.0.tar.bz2 444056 BLAKE2B 438e6b602cc8fd81e08ca8d443037064e9befc2ef171ad4fb16363378341b0228528562664626c58417364a5e7c6efd57aad32d95758056c5d37c9334eae03c7 SHA512 91305e6ab0c6de668ba878965dcef14b02010873bcc494d20200850357bf74f07f60c1d7a15f4e5f53a266b0b2528566bd429335eaba85445b50ab396595eb87
diff --git a/sci-biology/SEECER/Manifest b/sci-biology/SEECER/Manifest
index 8f7967346..e557923e8 100644
--- a/sci-biology/SEECER/Manifest
+++ b/sci-biology/SEECER/Manifest
@@ -1,2 +1,2 @@
-DIST SEECER-0.1.3.tar.gz 9457477 SHA256 bfe7885170810e99d0b2459fa84b94f6695457c393f6153c8d74db15a688e2c2 SHA512 7e7c4a8525ffd9104402d7eb10f7fd99648214dfdc6dc2cd40ed22a641dbf80ddc2e5945cdc5d3a8776f781e069c5490825f3c132843d2ea6ce26440f84e07d3 WHIRLPOOL af60f230f014a7231b0a4b5ac41056f193dabdd8af57b4d142a2f0f005d6d613526c4b5220c790437382923b386481ac45ef2a243d8f7b44323be1fb87a3a723
-DIST SEECER-manual.pdf 233688 SHA256 f8f1bbc6053158ed080545692dbd9db47a8429d0900d5df9109e6a9e55295ee6 SHA512 735132309c00ff5b46d9495e0b248727bb7fac98fff830ce0f9b9d6620e592c65b4850945157706fafcf81b396fc52071bd7671cb31ea20dfcb959b16b51cab6 WHIRLPOOL 38d8fe7d904c155728c12a26fee79b64ff9695be616babfc38f83c17c03a1d3c396834447bc97e8345e770984c138d09dc0bfc9d8eef1e5dc037170711d78811
+DIST SEECER-0.1.3.tar.gz 9457477 BLAKE2B eff403e0a754dd66d5b98d4aac6f3168222127e1551c7acfe84626d1f36fd6ba0febd54d4d28df980dfdc85461807c5b5cb790a1ca2f91b327b0d7a302aff1a7 SHA512 7e7c4a8525ffd9104402d7eb10f7fd99648214dfdc6dc2cd40ed22a641dbf80ddc2e5945cdc5d3a8776f781e069c5490825f3c132843d2ea6ce26440f84e07d3
+DIST SEECER-manual.pdf 233688 BLAKE2B c78b79ab93d13272fbaf87806d799a85b3f070c42019d46235b81d87c93dae96921957cd40bb70aef33d0a8be97a109766458ba7fb94d4cc08ea3bf32f8f8a1c SHA512 735132309c00ff5b46d9495e0b248727bb7fac98fff830ce0f9b9d6620e592c65b4850945157706fafcf81b396fc52071bd7671cb31ea20dfcb959b16b51cab6
diff --git a/sci-biology/SPAdes/Manifest b/sci-biology/SPAdes/Manifest
index d97eb1723..1e14b8e68 100644
--- a/sci-biology/SPAdes/Manifest
+++ b/sci-biology/SPAdes/Manifest
@@ -1,5 +1,5 @@
-DIST SPAdes-3.10.1.tar.gz 7293511 SHA256 d49dd9eb947767a14a9896072a1bce107fb8bf39ed64133a9e2f24fb1f240d96 SHA512 0d1bfaa67d6fc8732bc8d5ee4994629e95296a2a6c49bbc73383a7bdd7586f9be6ea6e2ffe3160821f7bd7c31745434fe5f6319da756ded3275fb6650ae9ada9 WHIRLPOOL c1dfb58411a38422122914b242361d2f3822e89c1456fa8abfb3ec46785808ff58306521edb2fee02f655404ba449d74643dcdfbecb39b67eaa0aba026f1f9a0
-DIST SPAdes-3.10.1_dipspades_manual.html 12561 SHA256 c4240cd2f8e29e428be03a76080b8d7b1360a5d4e2034472df43f435319b5e1c SHA512 618284c899b5c0f167b91638ac3ca4d7ee2c932f5acbfa6225f43276b073259000022f12afa3d8df26dfd967085b3d2d11ca006766169199afc02de111a78db4 WHIRLPOOL 0fa1a38523c23d32efbb4af9a16d49cf25a19b3f13a429ee2f926c04865d969fbf6b99410cf188669206d4600423f50a56143f915c1c24d837774e9cf1203505
-DIST SPAdes-3.10.1_manual.html 60105 SHA256 14c8fba956c8c70f1d72950a8b171395d4bca65feb89c9be20a723f8ae92f2c3 SHA512 ce69945b00eee73a4384b284fcd66e3d9f0619cf9c3eb76311604ba749841fe5b56208fcd2fdd02455567ad3c0125312dc80f67d69137c66f8805c709f39041c WHIRLPOOL 8131280813e4e581c182eccb8910371ee297ebe31824cfa20f9ed0c3dbfbdce5a8ffe63625454297a88fd57df0fe12509d731654407513ad4dfc3d239bd77842
-DIST SPAdes-3.10.1_rnaspades_manual.html 4676 SHA256 8a8fa4ee73339a9d64325aba6fe901dcafac1dca9b503388563753fa5f764efe SHA512 68d5dc92c6bc7c865221d52a45d056657cf80ecb4a3d25f49b68ad6e654d353372e9ce862dbf9c164da310a703a31e81f5af68b8ceab1d64651134650fce4cff WHIRLPOOL 4633b5befa1978845d10ff43b4798c9353317e23106ddd936a045a51777c8f7793bacfb76e799e944c8f709d6d7313d36e88f486cdded9555f7bef3c74199f1d
-DIST SPAdes-3.10.1_truspades_manual.html 10769 SHA256 eb8b40beb331eca3d8fd394cd0ce2237a8b6d0245f63ba2735bdacd5bcf5858a SHA512 e19a9385ae63f32cb232c90abd16eb8563b6b8f0abcdb2aadcfdf35cfe4aee8cf329fc97e5a2a7149ac9c6fce40791b5a89c9431de90d6e1d3651b6f0a5e221b WHIRLPOOL 9f5f863ddf65ceca70021948459a8a492f90bc879870d11a04ef85c510574239ab0ad1139bca8a835c7df9c785599385dff5657ec68174a67617bb8e77c53a87
+DIST SPAdes-3.10.1.tar.gz 7293511 BLAKE2B 5df2ed7b7ce51e3a84d6de0704cb0fabc5c3762e7373ae544c3843a7b1c213115cf9b4dd84eacd8f8a32447aff33ab5bfee07eb6f506f0b6aa6e4bee05469dab SHA512 0d1bfaa67d6fc8732bc8d5ee4994629e95296a2a6c49bbc73383a7bdd7586f9be6ea6e2ffe3160821f7bd7c31745434fe5f6319da756ded3275fb6650ae9ada9
+DIST SPAdes-3.10.1_dipspades_manual.html 12561 BLAKE2B adacd4a195a1ae4ce400907d728aa9df9398ffd8545777dc2d5a69cab4396e73825e4e8f42d3d590cf82ec4f6cbb0e4783d3d731b6637b0ce8cf8afe2ebe689b SHA512 618284c899b5c0f167b91638ac3ca4d7ee2c932f5acbfa6225f43276b073259000022f12afa3d8df26dfd967085b3d2d11ca006766169199afc02de111a78db4
+DIST SPAdes-3.10.1_manual.html 60105 BLAKE2B beb76d87cc72edf5edf61a915b3e27b0c89d2a71ffd9c7dce757f08cf42b895fb815ad442d0700aab57ec60ed097cdf33ff629f43ccb1a1cb44f0e4d9c7cc311 SHA512 ce69945b00eee73a4384b284fcd66e3d9f0619cf9c3eb76311604ba749841fe5b56208fcd2fdd02455567ad3c0125312dc80f67d69137c66f8805c709f39041c
+DIST SPAdes-3.10.1_rnaspades_manual.html 4676 BLAKE2B fa39bd4be56ea07d4231b95516718532d1d5ef3cb4e49f91b63a06552e15798d814e402d1d73ab73295ff0e8b86bb786be9ead2689d1fb0dd4f185ce9dec3648 SHA512 68d5dc92c6bc7c865221d52a45d056657cf80ecb4a3d25f49b68ad6e654d353372e9ce862dbf9c164da310a703a31e81f5af68b8ceab1d64651134650fce4cff
+DIST SPAdes-3.10.1_truspades_manual.html 10769 BLAKE2B ec2788a9dfdb783b8e922517263d54177595c4c6b6feee7d4c6122c3c7db561a8e2f31d210af1d6384aeb9554fb551a3ddb9937bcaf185ad6707d8c3f049f48a SHA512 e19a9385ae63f32cb232c90abd16eb8563b6b8f0abcdb2aadcfdf35cfe4aee8cf329fc97e5a2a7149ac9c6fce40791b5a89c9431de90d6e1d3651b6f0a5e221b
diff --git a/sci-biology/SSAKE/Manifest b/sci-biology/SSAKE/Manifest
index 74b276a0c..8fa1a7f44 100644
--- a/sci-biology/SSAKE/Manifest
+++ b/sci-biology/SSAKE/Manifest
@@ -1 +1 @@
-DIST ssake_v3-8-2.tar.gz 2390868 SHA256 254740c04ce2dc3afd8a4c3615be56baebb8b98a5e22bad6c3dd166a4dfdcb10 SHA512 12d05a37847a4c10291e75ac60d48b8cedd4f5380c8ef5668204728858684ef1f0847e3a8d5e7c08f31edd37fdf7ac0b16bae64139fee34e47d8e4f8a777965a WHIRLPOOL 2b60b9bb46a9564a54e18dcc2bc4d7a5166d8444f0ff9429c7040f57cbf013f75515581af4d67a759dcf4841be3a4fb0c8ac8ec5f45fa0117cd243a1cadc6ef7
+DIST ssake_v3-8-2.tar.gz 2390868 BLAKE2B 3286f3f5f432dbab7f9f8d1a7130f66b2ea807aaa36d16dea32e7446a3cb1d2a991feb4290338e88ef2c198f3c81ac732d7a5b1cce602f563f818d57cacdf8e9 SHA512 12d05a37847a4c10291e75ac60d48b8cedd4f5380c8ef5668204728858684ef1f0847e3a8d5e7c08f31edd37fdf7ac0b16bae64139fee34e47d8e4f8a777965a
diff --git a/sci-biology/SnpEff/Manifest b/sci-biology/SnpEff/Manifest
index 05c15412b..9bec29d19 100644
--- a/sci-biology/SnpEff/Manifest
+++ b/sci-biology/SnpEff/Manifest
@@ -1,2 +1,2 @@
DIST SnpEff-4.3i.html 101923 SHA256 10e365b8567ecc11453eb123ab24a483a682223baeb269fbe66e7c81320e80c6 SHA512 ecf6c56508dff0abaec9dbc05677e958e10ad1df97ae0a29007b0748598de8f0982c298ea9a7e5d8692c5abe4adacd4afc1307137a92ea81e793577bc1e7ecaf WHIRLPOOL f503346a51461de107b05b047b5472b6739e264db1718afbf38c501ea2dc0ccb7a609eec38d383112790e1b4a6ac36680d5e198cd0d11f91b0f9d028c098fcf2
-DIST snpEff_v4_3i_core.zip 48456135 SHA256 ebd3d5bec106c3ebc68961b941d3420c44fe1febe4654eb2931eb100c4a33a44 SHA512 6eb90afe125022da48a0d70c445c362ea8f9138d7dcecbf5fff1bf4f2d6bdbba812591416669481890a0d8bc89518023c2e0d1ef2d91d5efa7cce61cdbb02676 WHIRLPOOL 74557c36a58c0cf29b82dcf3af9da2e7824195c805ae6c5a875c346fdaeef5021a92009d8fe003b20dbce3f2f728285e4af24c5c8ecdb588974578b5cb955dd7
+DIST snpEff_v4_3i_core.zip 48456135 BLAKE2B ee5f77119883d2fb6f118f9de523dda76f0fc5ba742b2873e1affdae025a9d6121775aa760435caf2b0fcc3550873e198c20b0e2030bcd387d88a4cc4bc32114 SHA512 6eb90afe125022da48a0d70c445c362ea8f9138d7dcecbf5fff1bf4f2d6bdbba812591416669481890a0d8bc89518023c2e0d1ef2d91d5efa7cce61cdbb02676
diff --git a/sci-biology/SolexaQA/Manifest b/sci-biology/SolexaQA/Manifest
index f87383254..228498d8e 100644
--- a/sci-biology/SolexaQA/Manifest
+++ b/sci-biology/SolexaQA/Manifest
@@ -1 +1 @@
-DIST SolexaQA_v.2.2.zip 40266 SHA256 031b4643f1c740a35995b7dcc8cf9086e6721a2fc8a7b609139a58f5cfed3266 SHA512 e1aef383ff891106479ee0f35bbcf973de8d65f4be4822f406378ceae7178e5c370583c966b14660ac205e82a57de495bd0f26eeed190b5018564de5b119e209 WHIRLPOOL d62f9c1367dace962225ca4481820c17344d1353f7d26b38f6a289b5a91399dc3cf13427eb10d9c12efa19ac57264d751dbd110504f94bb1cd90d8c770ddaaca
+DIST SolexaQA_v.2.2.zip 40266 BLAKE2B 8823500f354f0d08ec01b52a97bcddc503a0c88def8038c48b5a0365eee4e827b4af08b9c3e6e8ae4c404d7aa336be250e96eec47462bc31e11ef27f06c27021 SHA512 e1aef383ff891106479ee0f35bbcf973de8d65f4be4822f406378ceae7178e5c370583c966b14660ac205e82a57de495bd0f26eeed190b5018564de5b119e209
diff --git a/sci-biology/TransDecoder/Manifest b/sci-biology/TransDecoder/Manifest
index fc55c48c0..90ba20194 100644
--- a/sci-biology/TransDecoder/Manifest
+++ b/sci-biology/TransDecoder/Manifest
@@ -1 +1 @@
-DIST TransDecoder-2.1.0.tar.gz 11500688 SHA256 681a8dd72e482cb322d74d8431ddcda61f25c53ad5453d0e22c02c92b2157b24 SHA512 4635a544ef56718db3fbfbe84ab47dfd7af605df73ead69c98e79dca64649c91d6d5139f0b5540d307f23fce5d0d75289c4fd1bedffc393721ccd9b863b7b043 WHIRLPOOL 9c8200e77c5c25384c87bdfe6daeac51336c61abcf6cc247f01f1b80aa0c9eb1a6c70f008ca3b09522fef3988583c520d1634d18bfcabe81eccad772fb7e433e
+DIST TransDecoder-2.1.0.tar.gz 11500688 BLAKE2B 83d12acf0a80e3e5b696bed5433749d995e03973a8293921f8052526bfc744b2ab606d1f99e24b4ff491a4cedd5f48f150606fafa4bc99be0c84bfb68cf29fd2 SHA512 4635a544ef56718db3fbfbe84ab47dfd7af605df73ead69c98e79dca64649c91d6d5139f0b5540d307f23fce5d0d75289c4fd1bedffc393721ccd9b863b7b043
diff --git a/sci-biology/Trinotate/Manifest b/sci-biology/Trinotate/Manifest
index 8e5dca6ff..0433c4ad9 100644
--- a/sci-biology/Trinotate/Manifest
+++ b/sci-biology/Trinotate/Manifest
@@ -1 +1 @@
-DIST v2.0.1.tar.gz 29226683 SHA256 9411b51c5a40a4885a96fb7df2b8f398d176a7cc23b12d642ab85dcaf1b00a93 SHA512 389ae53c53910b26cc78578cd3803cf14925964e2209e1baabdce78f3a2a73d064f6484e0355cc9597f4cd13ec09ba93da97b19cdc5646fb9f8f4ab91fbc98db WHIRLPOOL eded82cee2f82baa50b21f8735a0fb3087bca6d0ea42b6dad098e5d2d64d42639f16189e1d12369b7317b6768542fcd536a875a1363dbc3f722608fa125491f3
+DIST v2.0.1.tar.gz 29226683 BLAKE2B 427b9deb88729b870bca2b617af5cc14a4e2cfcee0e300eef35013e851c58009e1ac6ca3f5d699ea133aec2ab6a2b0de98df09d763a349c58d3fd8990db37a40 SHA512 389ae53c53910b26cc78578cd3803cf14925964e2209e1baabdce78f3a2a73d064f6484e0355cc9597f4cd13ec09ba93da97b19cdc5646fb9f8f4ab91fbc98db
diff --git a/sci-biology/VarScan-bin/Manifest b/sci-biology/VarScan-bin/Manifest
index cd23b534b..0e3460d6d 100644
--- a/sci-biology/VarScan-bin/Manifest
+++ b/sci-biology/VarScan-bin/Manifest
@@ -1,2 +1,2 @@
-DIST VarScan.v2.4.2.jar 114840 SHA256 34ff6462f91fb6ed3f11e867ab4a179efae5dd8214b97fa261fc616f23d4d031 SHA512 a58c35412a3fb5a3750a4f3fea834e92bde3e0b98c6bbf48e677589a3d99dcd82a01d864ab0c5d19d2089cad1174ea9f70c8081fbc02fddfb3723c8c9af6de68 WHIRLPOOL adf7f4a149010a438438fb5c51a2ffa45709d22d72b94053803eb8d4e2341a4eebc3e9db5a6d7e9c175b691e8c72201fe30f0c995a94802603492b569b091a92
-DIST VarScan.v2.4.3.jar 115272 SHA256 dc0e908ebe6a429fdd2d0f80f26c428cfc71f65429dc1816d41230b649168ff3 SHA512 4ac1b35796923261e0273f8e761b391090b2bb6ca8555bd87ef2ba8386f72ad840e84380202516cf332e5efffe2bbb71c97b1f504933e46579ed0f7a48d55091 WHIRLPOOL a09766dbadcfaafd9c7c7995e71d5096b50d77564ccdfd3af8674a65d38a860895692e0056560a0adf566ed2f263ed98ffe0f17873b5362eeb4e811e81fbc3d1
+DIST VarScan.v2.4.2.jar 114840 BLAKE2B 3e788d185bb02f6e5f35ba31cf1e8ecb084c7edf6010bb9500171f6998035b9b5eea6c5c4bd3eddff300bff4334a0a0091f9f0fe4fa01fe033b0f8ad8a3f63f2 SHA512 a58c35412a3fb5a3750a4f3fea834e92bde3e0b98c6bbf48e677589a3d99dcd82a01d864ab0c5d19d2089cad1174ea9f70c8081fbc02fddfb3723c8c9af6de68
+DIST VarScan.v2.4.3.jar 115272 BLAKE2B b7eaa043bcd69863d9b98b861daed86886b0229a97aa98cc650fbff4d271c29cc01ff38e4f7028d4548012cabf171cc6c2f1a4d4f6dd96e573e047ebfbe0d892 SHA512 4ac1b35796923261e0273f8e761b391090b2bb6ca8555bd87ef2ba8386f72ad840e84380202516cf332e5efffe2bbb71c97b1f504933e46579ed0f7a48d55091
diff --git a/sci-biology/VarScan/Manifest b/sci-biology/VarScan/Manifest
index 4596de996..08287bf59 100644
--- a/sci-biology/VarScan/Manifest
+++ b/sci-biology/VarScan/Manifest
@@ -1,2 +1,2 @@
DIST VarScan.v2.4.2.source.jar 205503 SHA256 d65c3a761ef3ed25544a62b0885373628d3f4f644dde165cd47448e5c175c791 SHA512 92a31b22574144fdb9800b6b3bf016d151119f7e147b47fb9063d1f772a817867265057cd7895fd5a450ef998956e0871d52fb929acf00866f4224586efdce4c WHIRLPOOL a6e3336a55109744dd307556909f105ac4ea6a6a7c9c6a28b657b2a38a0f6da0152519275f6078c667fe4c03fe56c4b86e452a3cbcd5170ff55855d9a859770c
-DIST VarScan.v2.4.3.source.jar 206397 SHA256 926927b37bfab7ed7d33861c053b3204aaa211adf4260fdeb312624ae6aff00c SHA512 620a3a41b1e99fe7e1d6ca629287de26bff517efb70a42610abbc66092c935775dc4b2ad10a68c38e69b3063cdadb5794355219f6bf20809761804038713117c WHIRLPOOL c2ec6d5adf96f095b0d4b317d1c5f06ce905bb2bafcf8c75d09377bbacacadb565b7c9c4809f947c48eec220951b61f97645de044bab29c753348c96219a9938
+DIST VarScan.v2.4.3.source.jar 206397 BLAKE2B da6834f57954faf6c3db4fe8adb2e278e709569165a202efc9ac5994d6755a975890c91f3430621afac65c0081cd2ee4443a1a16d5efa3125b3701d7f586f001 SHA512 620a3a41b1e99fe7e1d6ca629287de26bff517efb70a42610abbc66092c935775dc4b2ad10a68c38e69b3063cdadb5794355219f6bf20809761804038713117c
diff --git a/sci-biology/VelvetOptimiser/Manifest b/sci-biology/VelvetOptimiser/Manifest
index 658081951..08a93b8d3 100644
--- a/sci-biology/VelvetOptimiser/Manifest
+++ b/sci-biology/VelvetOptimiser/Manifest
@@ -1 +1 @@
-DIST VelvetOptimiser-2.2.5.tar.gz 28786 SHA256 a7c2f213dff80f8448081a15a487a55cb5e3432f836763bcb5c38abc800af503 SHA512 27a19c360ce6c469cbb9d9025c14954b98f6b91680402a32f29843694be7f193113161bf89e98ed42d2bd70a400e9dd729ba51bee5e50f7b953789943ac83f68 WHIRLPOOL 3c889a6576bc42ec2e71492a7c3675746f825591ca8af9a6bdc7627d5ae12803adc4c4f994df91f7c07075ac20063f7781933d321f0d69b72f017f25ed20842b
+DIST VelvetOptimiser-2.2.5.tar.gz 28786 BLAKE2B 4ed429bed3ed65a14886a02afadf80789b636967c05187338cd23c5adfa7cec4bfaabbbc8a724c73f3a0c4838de13d7b95dd28399c8f13c0e02748dce5e5b830 SHA512 27a19c360ce6c469cbb9d9025c14954b98f6b91680402a32f29843694be7f193113161bf89e98ed42d2bd70a400e9dd729ba51bee5e50f7b953789943ac83f68
diff --git a/sci-biology/YASRA/Manifest b/sci-biology/YASRA/Manifest
index bc156d9ed..fc562207f 100644
--- a/sci-biology/YASRA/Manifest
+++ b/sci-biology/YASRA/Manifest
@@ -1 +1 @@
-DIST YASRA-2.33.tar.gz 12404012 SHA256 65e0f64f817542af995d8346711bd0b139ef50a791fd17e9bde19651c5654dad SHA512 1299f6bf5dc9c2eb072fefdc0109d11daeed9fe16208522a046ad93fd274fb474224dac7fd2f9ec5328656e22b96eb63b70ca875b32d138e6451d1253e0ef998 WHIRLPOOL cd9bb2dd65b985f3890b64a3882d8094345ded561cbef642616c487c450303c3f6776289b773262fa0db71beba04f9ab55eac5106914d858247cebab84feb389
+DIST YASRA-2.33.tar.gz 12404012 BLAKE2B 8a5d64f42d4035e0d4314dac32edecf7283ace2451b3a4ce3b4756e4da8286d5d33986e97626f6ae1ba36b4c7c1b558e503a416692dd838260bb2d85f53278e5 SHA512 1299f6bf5dc9c2eb072fefdc0109d11daeed9fe16208522a046ad93fd274fb474224dac7fd2f9ec5328656e22b96eb63b70ca875b32d138e6451d1253e0ef998
diff --git a/sci-biology/abacas/Manifest b/sci-biology/abacas/Manifest
index f95aff4f7..80e528e54 100644
--- a/sci-biology/abacas/Manifest
+++ b/sci-biology/abacas/Manifest
@@ -1 +1 @@
-DIST abacas.1.3.1.pl 64936 SHA256 0afee209a4f879987b320e2f882bc0eab540a7a712a81a5f01b9795d2749310d SHA512 5b60f85439ab751e4b43eba827dc8b4a8ad7d3acbbdc1f13a0f83e227cf8eb4d94dd5a32c4e6e37aa4e263758973ada5ab8e476685c56b6856c06218b547f76f WHIRLPOOL 5b99ee3aab66f06ccd74f4393dff42f1525a8b2c2c7679dfde180bb2262dd4c9d2d3a45585ed39d10f38c6f53d3b3089be9c65ee1b22d90938fcc09c8da14500
+DIST abacas.1.3.1.pl 64936 BLAKE2B 847cea2ebabfe0c990c6cf5437571726b15193ed7e0c360aa3b524a3c69f5b51e40f3a5cabcfef359313f09b3b1851b1edc88093a6f5a4ae5a27d8905fa62084 SHA512 5b60f85439ab751e4b43eba827dc8b4a8ad7d3acbbdc1f13a0f83e227cf8eb4d94dd5a32c4e6e37aa4e263758973ada5ab8e476685c56b6856c06218b547f76f
diff --git a/sci-biology/aghermann/Manifest b/sci-biology/aghermann/Manifest
index 61dd3bca0..829b2ad3d 100644
--- a/sci-biology/aghermann/Manifest
+++ b/sci-biology/aghermann/Manifest
@@ -1 +1 @@
-DIST aghermann-1.1.2.tar.xz 511876 SHA256 1d69487581abd80fe414c4165b790be9e6b33660cc674016a55fa10d4435ffa4 SHA512 4b7dee0ee53abb6c6a6201039fa24a4a12e6cb94bb284ad59666afc5b93ae533f41fe258f2e585246e63eb58fc06169cba00bfbed694644d6c01ad200b5aae55 WHIRLPOOL 66bb3cd506018a22bb374dc936859bdfbad5124dded4b52290d830d2922bb8171d39f2589d62a85cb2df28057c501545a6a488f133b3892251bd6afbc07cdf9b
+DIST aghermann-1.1.2.tar.xz 511876 BLAKE2B 895d7c5e0428a4e38c50791e9e4fd774e7e3f6defaa678fe2d3d89098fb1bb6f77d761bc202cf7370b47dc7666c51dd969db8e92ac8905d2b010ab5e43e98e07 SHA512 4b7dee0ee53abb6c6a6201039fa24a4a12e6cb94bb284ad59666afc5b93ae533f41fe258f2e585246e63eb58fc06169cba00bfbed694644d6c01ad200b5aae55
diff --git a/sci-biology/align_to_scf/Manifest b/sci-biology/align_to_scf/Manifest
index 50cbdc3ef..1cccc43a9 100644
--- a/sci-biology/align_to_scf/Manifest
+++ b/sci-biology/align_to_scf/Manifest
@@ -1 +1 @@
-DIST align_to_scf-1.06.tgz 25463 SHA256 792d5023d02570cfb8510adb102ddacc3795ef5689e91c96e9e56b304ec70ddb SHA512 c2385dadcc95c17fafd710de15660803c72dc677a00a291b69a6e09e8286921135213494113dc916ca8d057a81e5eb6e35f2641394f3c8171c53a59df98e4b79 WHIRLPOOL c3c52063ea21cfc960225b211a539199f23d6593037a8a27fbc922565eb6654e762adbf30683735b1ea528b908bca097e9bd688ef21dbba51590621b3582b04c
+DIST align_to_scf-1.06.tgz 25463 BLAKE2B 0d8e954465d2b087cd784b2f5b84fa6e0a8cb8c6ef0a93f652829a089114f119c1decfdec598cb1d1ffa4b9f087faef22060ee144aec448fa64aa4fab0d49ebb SHA512 c2385dadcc95c17fafd710de15660803c72dc677a00a291b69a6e09e8286921135213494113dc916ca8d057a81e5eb6e35f2641394f3c8171c53a59df98e4b79
diff --git a/sci-biology/amos/Manifest b/sci-biology/amos/Manifest
index 27ad50ff2..f7c93a72f 100644
--- a/sci-biology/amos/Manifest
+++ b/sci-biology/amos/Manifest
@@ -1 +1 @@
-DIST amos-3.1.0.tar.gz 2094268 SHA256 2d9f50e39186ad3dde3d3b28cc265e8d632430657f40fc3978ce34ab1b3db43b SHA512 7a416b9a0438b47425355383b709491a58f38c8d834df29e43c942170e710c6ea7e3bc8c509a58421b1340ad6eece9ea2da357ce5cd1d41ce08375676ee30491 WHIRLPOOL df9b547fcc0b7bf0149641fd8df9e4558f61bb6c17ded0facfeecde25d3a6307b40414e7cb8b2f021fa8cc192ee956672c26e0fc287981f4733a393739e80b61
+DIST amos-3.1.0.tar.gz 2094268 BLAKE2B b9fb80d4e7b7e9e7769081c2680a3cba26591f00a4d9fdb17ad602e581dea5e8e2add4b0d9d3821a7f8a4ec1a45dfd867037baf35ecd401584f030c86b2b0f83 SHA512 7a416b9a0438b47425355383b709491a58f38c8d834df29e43c942170e710c6ea7e3bc8c509a58421b1340ad6eece9ea2da357ce5cd1d41ce08375676ee30491
diff --git a/sci-biology/ampliconnoise/Manifest b/sci-biology/ampliconnoise/Manifest
index ba8f0d5c0..6b910f882 100644
--- a/sci-biology/ampliconnoise/Manifest
+++ b/sci-biology/ampliconnoise/Manifest
@@ -1,3 +1,3 @@
-DIST AmpliconNoiseV1.27.tar.gz 1379908 SHA256 05d8594bb0900675363761a25f4b1982e63c3b85c5d5cc5e54164f456843d99d SHA512 71d1f3c7cd890844b0109f35e5f299b41245e4cd0b7026f4a062d378706942537214979b208e5c25e00d6fb60111c5b1f17a21bd3cb8128a6a2c5854cc5d83a5 WHIRLPOOL a5fb83d502f32ec671867e361b94dce3fa86a1a22a52bb12eaad47cd87e7afdef1a4d8a43b9ec6ea8278caba5f71d076053b8ca746646e7a2e330bd1aba39749
-DIST DiversityEstimates.tar.gz 35625 SHA256 3b84fb8878576b375699a70961120d2de546b86afd4c9f7ef39ad3bd897595d6 SHA512 81cd24ac3533a982555f8e4a0dfdc61c5fe6340892bbfad44babd801fe502f90ba68dedb938d881fc38d8e809cbe4a300d2218583f5e495c28c572726c777165 WHIRLPOOL be214dbd2cd322844f2427a1fd54e836d1e0f966819187883ea12948c4c07303f3c714e39ff7f5ab5427ec41817569f5b4261b417f1f019bccc0fb59487f9651
-DIST TutorialV1.22.tar.gz 31274115 SHA256 fcc82164522e37737bb90997f8a6a1438f10ec45eb6fc9940bd200815920eceb SHA512 73f67df1f0f2e6f0fc95a626ef4cbc002449aba62a1b1c0f1058347c48ccd39619fd6748fc109f2541a7e87b595e88ec491289dfba8e8b23c5fa06821bf3d660 WHIRLPOOL d49ca3988801ea8f3f087d2de735c15ff820504d9eb48bb9124e5162442bcffaba76cffd145da77ad39126ebc7497b18cb5139a2a1da31a6dce2df716a7a97dc
+DIST AmpliconNoiseV1.27.tar.gz 1379908 BLAKE2B 2f02b031902488e5af144203602d515ef2a8659375db923f6d9961c670c20fb7a9683e65a7765c05a2d45f14d6f56fd791eea627a3713c1cef530cb3d23c0a0a SHA512 71d1f3c7cd890844b0109f35e5f299b41245e4cd0b7026f4a062d378706942537214979b208e5c25e00d6fb60111c5b1f17a21bd3cb8128a6a2c5854cc5d83a5
+DIST DiversityEstimates.tar.gz 35625 BLAKE2B 7d4afc13917643e5c15cf7bfeb496fc0f22c037948744f7504e8d67fc46ebab2994c1af443ad8907cf5e9737092192058658e1eec9d000b2b0a1b4b45ffc64a6 SHA512 81cd24ac3533a982555f8e4a0dfdc61c5fe6340892bbfad44babd801fe502f90ba68dedb938d881fc38d8e809cbe4a300d2218583f5e495c28c572726c777165
+DIST TutorialV1.22.tar.gz 31274115 BLAKE2B 2d6a7b3b47d7093021de4fb1fd5f47429e3059cb4770f352cc56b8beb23c6d310b4b6524820f3e76b5af8994f2ffebbc803c061554d9ec5f8da4848cbf78cd93 SHA512 73f67df1f0f2e6f0fc95a626ef4cbc002449aba62a1b1c0f1058347c48ccd39619fd6748fc109f2541a7e87b595e88ec491289dfba8e8b23c5fa06821bf3d660
diff --git a/sci-biology/arachne/Manifest b/sci-biology/arachne/Manifest
index c06393105..c70683996 100644
--- a/sci-biology/arachne/Manifest
+++ b/sci-biology/arachne/Manifest
@@ -1 +1 @@
-DIST arachne-46233.tar.gz 5161566 SHA256 1b2c254a19b4792ec8a6c32ffc3d97c20e43deea3141ee975995221c7ccdf990 SHA512 4ab293e7f4477dd6aeba7c6bc1a78d168cbb811d7f67cbcbc1eea094a7b6bd180bdde6fb1b7c8256ff473dba3d748a43bd426d971575f1c0793289a0b200dc2b WHIRLPOOL 9d18c31fba1e69690d6a20c75b47319298b56c7a73ede0fed55e1d4b30c7783bc7f5d5f54346b1fb05376c54854c4ba7f2f89401bda178c5aac8e39957292ff8
+DIST arachne-46233.tar.gz 5161566 BLAKE2B dc9381fae80477e4a2439e24cbcf9bc462c7a4effb06c26a9f74ad1740f86a96273c3dae142d0065aad08d6340e9508528c35ee6914a8405b66327bfc4ec89da SHA512 4ab293e7f4477dd6aeba7c6bc1a78d168cbb811d7f67cbcbc1eea094a7b6bd180bdde6fb1b7c8256ff473dba3d748a43bd426d971575f1c0793289a0b200dc2b
diff --git a/sci-biology/argo-bin/Manifest b/sci-biology/argo-bin/Manifest
index 73550affb..fd419cbb2 100644
--- a/sci-biology/argo-bin/Manifest
+++ b/sci-biology/argo-bin/Manifest
@@ -1,2 +1,2 @@
-DIST argo.jar 26624770 SHA256 33ece2dba7ee5cc36f5aab99b3e7df2d641b261d86aacac00745e9d4a2e914cf SHA512 fc1aaa39453502054d402386d3551014d71a81a73593420fe5073a462b3f605e00e8b32e21e54a4f669a3f09a25e8946db17928c65c17beea26ec4316e91458d WHIRLPOOL a1a83d721f4273cee97ac04e9935c5254adf84f9187c5a7330339f71cad826cab3eb375105ba454835d5803de5d476615b6c497fb47af37536a1211d48a6b09e
-DIST argo2.jar 27685069 SHA256 7ebcb16d7dcf85d1a7c8ef427f78a4cb6a48b9ff2a1814b6d4931cf4f9218002 SHA512 8a03cfe6016ffa2d661dbf04ce9fde6e5474fcf111336399c934c481a4c71758b3007a20f3af931725c9e2f5f2bf3bc0c1d131cdda6e57992c10a6c0854207a8 WHIRLPOOL c89249b732c6450eb69170f0d00950a854a613eba10aee53290f1bf50ac1888bcbd7a2902788e824125702e2002e80015d0b21fcbd89bd0593688c4878d981e4
+DIST argo.jar 26624770 BLAKE2B 2da6c978c5fa80c2a9026c4264cfafb2683dea1db0587a382480ba2d1f7d5af07e78672ca5cdfbd38ce8fb4dd49b1ecfdbadcafe4a17f1f801d05934f726dcd0 SHA512 fc1aaa39453502054d402386d3551014d71a81a73593420fe5073a462b3f605e00e8b32e21e54a4f669a3f09a25e8946db17928c65c17beea26ec4316e91458d
+DIST argo2.jar 27685069 BLAKE2B 402e4a837caaa2d31e2287c4946b89116e0b3dabe40b75ce15657fab605f4f92ed9178e457d11f74950dede3b2e1f51e7e0c08411077e5c29e9a571f7849b56e SHA512 8a03cfe6016ffa2d661dbf04ce9fde6e5474fcf111336399c934c481a4c71758b3007a20f3af931725c9e2f5f2bf3bc0c1d131cdda6e57992c10a6c0854207a8
diff --git a/sci-biology/argo/Manifest b/sci-biology/argo/Manifest
index 6a14974aa..59a49566f 100644
--- a/sci-biology/argo/Manifest
+++ b/sci-biology/argo/Manifest
@@ -1 +1 @@
-DIST workspace-2008-03-11.tgz 109194467 SHA256 0ee6acb0ebdc17cfbedfedb8559ba950ddd4c5c4ef5f7875fa93f3fad885b99e SHA512 42696ac2a4dc0167d9fb84d8420254e4ba9256447ef320c1ca3906aac48944635397098962ee5a207b39afacc0faa2dc584e96c29ab1dead9892d6ff85228820 WHIRLPOOL d6ce9bad3039fb77eb9b0ebc00b0b6e966fa26436ed90e8942f0489cf024602b3cad817e0696e6c8770d68c497715a1841222cf68839be44efff921210a496af
+DIST workspace-2008-03-11.tgz 109194467 BLAKE2B 8554b08770d4cf2ecb29a348de06d304f778623e1f253ceb28876620292aba7c34981f254cbfa7a13e9d6bfec35106316482aaeb137eb10e5eeb2da3e8bf4b59 SHA512 42696ac2a4dc0167d9fb84d8420254e4ba9256447ef320c1ca3906aac48944635397098962ee5a207b39afacc0faa2dc584e96c29ab1dead9892d6ff85228820
diff --git a/sci-biology/artemis/Manifest b/sci-biology/artemis/Manifest
index 0a68bacef..230e664f0 100644
--- a/sci-biology/artemis/Manifest
+++ b/sci-biology/artemis/Manifest
@@ -1,2 +1,2 @@
-DIST artemis-9999.html_build.zip 2284822 SHA256 d78ecbf8906395ca27bb3d45ebeae05a792923c98866632468dd2cd26c9bbddf SHA512 80c952fe20f98b647f38a08a469cb351bb44aa1b0a7d1a9b997fabbd37107d5d934a6d52fa2abfde243f90f4e752c99d418c4ad6b634d82de9744d089eb1cf8a WHIRLPOOL ea67f08ebf8284a186690880d7185e8991e1616f782fbde640021f44085dd6247d065e3bdae557aa10af0b2584a7f40421b9ae6199328f677f17082fa7716759
-DIST artemis-9999.manual.pdf 1149449 SHA256 ab573b4ea7b895cb7d2a97e4d42a71938f1feda44e2da22fe5b079583ad87ba6 SHA512 1c3056dab7239c3a68b2e76491d77612f22ac8f83eaf32e0ab0a3901e03d3c65d5ac02f5758d2d7728d94dd44c29517a498fa94a947d5d319ded43ddec4ba5fb WHIRLPOOL a75266ae72075ea7547560a9046c1e0f813956b94a5c3d9af3cd08a579ed60af842c6ece94e6b1dfa5db1820094069edb7d88b4ee6256410ebced4310739d79f
+DIST artemis-9999.html_build.zip 2284822 BLAKE2B 4b29d2f503418e12433d9528bab618e1c98d3b6d54704dc8b7e443c9bbddd716a063810559a0680015ba396d76cedc4f76cc98bd822c97207ac17b9d98162631 SHA512 80c952fe20f98b647f38a08a469cb351bb44aa1b0a7d1a9b997fabbd37107d5d934a6d52fa2abfde243f90f4e752c99d418c4ad6b634d82de9744d089eb1cf8a
+DIST artemis-9999.manual.pdf 1149449 BLAKE2B 683583db0238bda801cd7fa3c915be41da53eb9d3b4e6e1fa1dfa5ce70585e483892263cd6d6a68ab6689d5663243897d6e6a758024a3a9644681ffe917bc972 SHA512 1c3056dab7239c3a68b2e76491d77612f22ac8f83eaf32e0ab0a3901e03d3c65d5ac02f5758d2d7728d94dd44c29517a498fa94a947d5d319ded43ddec4ba5fb
diff --git a/sci-biology/atsas/Manifest b/sci-biology/atsas/Manifest
index 628ea5765..4dd93d8f8 100644
--- a/sci-biology/atsas/Manifest
+++ b/sci-biology/atsas/Manifest
@@ -1,2 +1,2 @@
-DIST ATSAS-2.6.0-1_amd64.tar.gz 186039970 SHA256 f2f1d251d28f43fd42e13bac602b8a416dd9ad16ca56d12e7227174f9e16a2a1 SHA512 b3f83ef1d76e6e0597b1ce611be6a23823302ec0af9e0cf0251e343aacb231ae403128e748c7bc69981dfe398e13366c18fdc67fe6eaf37deb1d7ea7d8e8a25e WHIRLPOOL 85a3b7b023326645fd7dc2994fdd0c9751b3685fcb52a8a5fac36599997759efc8dbd8537a9527b140f533592ecc58cc90e59d31b9e6b7c5befee67c2ea1f0c3
-DIST ATSAS-2.7.0-1_amd64.tar.gz 227830294 SHA256 82389cf5ebd45c3e8a38aadf3534afaad99e4f9cb1173972b2f0004fb049bebd SHA512 ca73da9582be087081bda30751b34c6f63c9dbd93ac0523ef1fb1be7baabae7e8c255c20f592ca7157c11edbda908a609b7aabcacc5443f52e4d89e8c393c07b WHIRLPOOL 1d1f1d3fb8e2ecdce81bbbdd97c7e970cf1b361eaba2b27c120049137fa715b41f36306141aac72b08ca4deb9702a3ef2b53ca02f71cea4c86707b599a376c0d
+DIST ATSAS-2.6.0-1_amd64.tar.gz 186039970 BLAKE2B 266c8fdb816aa44ad8a0ffe9dfd4bced421c90d8d0d6a61effe153e91ae3d8c7016c8b942405c5e6e901109e38d24645440f4fdb1a883c9998924b220ed0586d SHA512 b3f83ef1d76e6e0597b1ce611be6a23823302ec0af9e0cf0251e343aacb231ae403128e748c7bc69981dfe398e13366c18fdc67fe6eaf37deb1d7ea7d8e8a25e
+DIST ATSAS-2.7.0-1_amd64.tar.gz 227830294 BLAKE2B 4bea72bb2ced2901f62bb82ee214ef070f3f93f88a93576f7ee11d139c1c50e610dd5c953e6d5d74f74cb54981e0be0293380dde8ad10bac5fa55de6ba4241e1 SHA512 ca73da9582be087081bda30751b34c6f63c9dbd93ac0523ef1fb1be7baabae7e8c255c20f592ca7157c11edbda908a609b7aabcacc5443f52e4d89e8c393c07b
diff --git a/sci-biology/augustus/Manifest b/sci-biology/augustus/Manifest
index 2de508495..1cb143b75 100644
--- a/sci-biology/augustus/Manifest
+++ b/sci-biology/augustus/Manifest
@@ -1 +1 @@
-DIST augustus-3.1.tar.gz 75867488 SHA256 6db15a859537ccab8739e09c9c28f59c31dd9781e19d91f0d4489f60c7c15486 SHA512 7662b9610d8c1fa7311e3c94b698f0051d4ec885645f5def8df0a9c65a42bd11d2e538c640170716b5f6a4064ad52549be80be977724cd2d52d9623fcd85e061 WHIRLPOOL 9409cd8c6272a39b52c8338d7a59099c86ba4b106ab6227927ea8e0afc3016db3914cacacf8873d259483d73d10d143b3123780fe39591e5b54b91ccba161288
+DIST augustus-3.1.tar.gz 75867488 BLAKE2B ba18c2da220719a2ea85034ce943053e6f47be0f40788b31335c8f4e4ad95de530fe643b0f9edd411e0e462a83d156809081bf1ae03d6ae9175c76ff289800ee SHA512 7662b9610d8c1fa7311e3c94b698f0051d4ec885645f5def8df0a9c65a42bd11d2e538c640170716b5f6a4064ad52549be80be977724cd2d52d9623fcd85e061
diff --git a/sci-biology/autoeditor/Manifest b/sci-biology/autoeditor/Manifest
index 651cb4ad4..9ea148189 100644
--- a/sci-biology/autoeditor/Manifest
+++ b/sci-biology/autoeditor/Manifest
@@ -1,2 +1,2 @@
-DIST autoEditor-1.20-sample.tar.gz 71953287 SHA256 f25beb3668ab2b3f2018e5e3b9615995ba5a16b5ce002ff50806287f28f5ef25 SHA512 4446f5f565621f51590db6ecd53c0c789a058756caf4be67cc15599c0054000487e10651f4b9f4ad03c6db6bcb9229c66e06b6217fbdb62ab51013669a4645a6 WHIRLPOOL 18ffb1db14562c8db0bb5c054b8d8a14ac9e7c58601914f6d67115b7484192905e235d6b6dfd14d2eae47998cdf8523aeabebbfa3ee0479a7ee51ee06738ef49
-DIST autoEditor-1.20.tar.gz 2438903 SHA256 c0c399eda52a10deb0e0362b4caf909014768a4d08e90c900392cdf712cefd66 SHA512 8599168296ead35621d1e6cd159852e7a05ce2f6de38d70058900e0a4d701f4aa146381221bcc0e7e63844f14141ff86c2d81c19d14a8e4a3e836186349dac5d WHIRLPOOL 79c698d1e19eed9571c9dee20234f0e2f99e90e9545f29c285703395009c06f63eb09d674d0efcfc7228f33584c7652557a4140d8ae9ab4dc80fc8a8661e2fe2
+DIST autoEditor-1.20-sample.tar.gz 71953287 BLAKE2B 531c524f70084d1b69fab801d4ab66c034dd25942c84af058cd6f3a2df3fabf88da0ea19c645e2de39be14c2054b4a36fd10a40d058862366b1d0843194152fc SHA512 4446f5f565621f51590db6ecd53c0c789a058756caf4be67cc15599c0054000487e10651f4b9f4ad03c6db6bcb9229c66e06b6217fbdb62ab51013669a4645a6
+DIST autoEditor-1.20.tar.gz 2438903 BLAKE2B 91b0c943fd3eb202188cd90cf290e2624ad5c27e9302bd93ecb2b4330a9dcc9b584c2023fb3ca2b9ccf6abf705bde0b3144f1ad48661113750d325969af631e2 SHA512 8599168296ead35621d1e6cd159852e7a05ce2f6de38d70058900e0a4d701f4aa146381221bcc0e7e63844f14141ff86c2d81c19d14a8e4a3e836186349dac5d
diff --git a/sci-biology/bam-readcount/Manifest b/sci-biology/bam-readcount/Manifest
index f503c6bd2..32f5d2b3e 100644
--- a/sci-biology/bam-readcount/Manifest
+++ b/sci-biology/bam-readcount/Manifest
@@ -1 +1 @@
-DIST bam-readcount-0.8.0.tar.gz 5736359 SHA256 4f4dd558e3c6bfb24d6a57ec441568f7524be6639b24f13ea6f2bb350c7ea65f SHA512 ef2acdc9e9b581cb0e4ccea51e3cb445394733f9812f68790a171b71d5f2f089f73aa39a62a6ddf372baa174b884f7d1e52f3f2c9a2abb716599fd7832501a97 WHIRLPOOL 688b3e461334cfc6b021d604ccf38c51ed774eae26da52ef3259ddc077b73f9ceb31a10f155713d0ba323c7cc6e7ea223336de31eab7fea573f0944b14475648
+DIST bam-readcount-0.8.0.tar.gz 5736359 BLAKE2B e31316cf999227a69f3aa1be452cc9200a153de7d1052650083392365e866faefd9aa4fb665dd2b1227eda9b0b2f6971fc334d2420e6cba4fc3d6e243127abba SHA512 ef2acdc9e9b581cb0e4ccea51e3cb445394733f9812f68790a171b71d5f2f089f73aa39a62a6ddf372baa174b884f7d1e52f3f2c9a2abb716599fd7832501a97
diff --git a/sci-biology/bambus/Manifest b/sci-biology/bambus/Manifest
index 117e5e97f..c9347105f 100644
--- a/sci-biology/bambus/Manifest
+++ b/sci-biology/bambus/Manifest
@@ -1,2 +1,2 @@
-DIST bambus-2.33.tar.gz 504535 SHA256 bc8e3c712719bccb00357001713e56f58aac57ae452fd73148eeccff291eefdc SHA512 b31360439938bd88a19694af0addceafa658e144c2d6dcc156f7b5a3a2df0e806d55f4e4e7cd31dbbdd9464201506da61b3d0b288ba34138770d3023ab40795a WHIRLPOOL de070bc2b8972b2563446dc2f2b130310110926dc8e7e8f08477992b7f43aa5636a65ce66f21781fdb3a0751e49f5072f0080204b07d7ea866631c81b2902d62
-DIST scaffolding_MIRA_BAMBUS.pdf 181237 SHA256 1a86233ab1cfaef6b23a09267129fd3eeec0a81a4d90995d69c3c72da5cca68c SHA512 fcdf458917b09613dea2769921dee625528b08fbb92c5bc0d8b32bb0f29f6b8d163e4b0a2fdf6c338ba4a872cd29cffd7d0a7aeb8beb6c9afc76d0cc812bbc29 WHIRLPOOL 780bf5d38357377477becae03feee14c8f2603cd337716c12b9011785897830edf48a35423003b57e0bc1dc550a9921800d0ff64c49f44ca01c928bf3df36bbf
+DIST bambus-2.33.tar.gz 504535 BLAKE2B 6fbc72f5983fe7cb78a5a090bf8f30c477403b4051a45c1b5b9ebcb405b70ca7d2910a16c95a0aac6df750d87256d4c6e87be75fb94c3b962f0976b074cf205b SHA512 b31360439938bd88a19694af0addceafa658e144c2d6dcc156f7b5a3a2df0e806d55f4e4e7cd31dbbdd9464201506da61b3d0b288ba34138770d3023ab40795a
+DIST scaffolding_MIRA_BAMBUS.pdf 181237 BLAKE2B 2829f3e99b7b7440c164be7648094aebeb9a9a583d3fa748ec70bd5aa489f5fc2e9a67293ed135d8f618256c05dc6619122cf826af8f60a82a72fa015a93e46a SHA512 fcdf458917b09613dea2769921dee625528b08fbb92c5bc0d8b32bb0f29f6b8d163e4b0a2fdf6c338ba4a872cd29cffd7d0a7aeb8beb6c9afc76d0cc812bbc29
diff --git a/sci-biology/barnacle/Manifest b/sci-biology/barnacle/Manifest
index bee304711..51ab4a364 100644
--- a/sci-biology/barnacle/Manifest
+++ b/sci-biology/barnacle/Manifest
@@ -1 +1 @@
-DIST barnacle-1.0.4.tar.gz 519904 SHA256 150e0da4054fcc096842e9dcbeb5292d9eeee5823bbc3e1c3be786e919f07d91 SHA512 1d6e52ae4f6a04c7816d098d92ccc54971a009d0a4b5ff780d69ec84a02e0ea05d692f09fdefb0a13d52b5bff6fcc65cd52f93d0a383ecfca268c1e6d2dafe5b WHIRLPOOL 3d4830f36fa72d25d493200c5e7ef337fa42645503b9516b7b89f71ea281850ee2fc264f9df40b0a94a7e9f30a090c29a15599da5bc65a2ba3d3c0ac8d14237b
+DIST barnacle-1.0.4.tar.gz 519904 BLAKE2B a1ba1dccc82dc17755c6bfebf0bd00b104e1a7a7d739df91223191119934c855e672ec2d5790f5a273e8d66c35c2d9e5cc49ce2961fad242eb1e7eaef413d097 SHA512 1d6e52ae4f6a04c7816d098d92ccc54971a009d0a4b5ff780d69ec84a02e0ea05d692f09fdefb0a13d52b5bff6fcc65cd52f93d0a383ecfca268c1e6d2dafe5b
diff --git a/sci-biology/barrnap/Manifest b/sci-biology/barrnap/Manifest
index 11284c5d9..8f18d6c45 100644
--- a/sci-biology/barrnap/Manifest
+++ b/sci-biology/barrnap/Manifest
@@ -1,2 +1,2 @@
-DIST barrnap-0.3.tar.gz 4102752 SHA256 f99a808a3b304748fff0394e4e048a8efb0a52ee309b6a4f7296e3e2cf05ce69 SHA512 4b67e995b335e9e8397481c60058bf3a21044e1829781f277027ce2b3e4836c17c30dc2453c6d7d3c00ef8c07394fc5cb46719bfd397e66db7d4ba3c5bfdd514 WHIRLPOOL 7c43f9eec8aa644de7b1f53d626b13fb1b838bef81680a7e96063f79e80ce2d23a101d1fef8cd7ad87165e24555f2bd866c02ff36d45bd5068c56f37c7a27542
-DIST barrnap-0.4.tar.gz 8053614 SHA256 9e31936283f1fbb4822afdfb589f82cc736d8a9c3e70bd8c46928b4cc8110f04 SHA512 77490398978df73cd2c5529403674cdb2142fa57506a997a95bd4c90a897756554a2d10598e28bac396b8b611b8c9b1c6eaf3bfb4e0d22724c4175d18c2e16ea WHIRLPOOL e721bc9859c633339ad6012373b116e730c5c3e68a810a75105a70e46cbba1c6609d128289feab5c6b192594c393c02c42a6e4b412cc35ed377beba926fb4bef
+DIST barrnap-0.3.tar.gz 4102752 BLAKE2B d904f7207a22073de36dcab8d45cf2c5c9740af5f16883621b9989bd036376b8dc727f28f7d7412bebef3fb87c8d23c9e0cb1be274433187819cacd38ceae28b SHA512 4b67e995b335e9e8397481c60058bf3a21044e1829781f277027ce2b3e4836c17c30dc2453c6d7d3c00ef8c07394fc5cb46719bfd397e66db7d4ba3c5bfdd514
+DIST barrnap-0.4.tar.gz 8053614 BLAKE2B a0953ac21dbf7a762c0211433550f9b92ddea39192de3e77ba8ad1c6d3e1b09f08f5cf947a63ca6e67dc6cd5144481798b3ad04962b697c0dd54e0b30d1fb52d SHA512 77490398978df73cd2c5529403674cdb2142fa57506a997a95bd4c90a897756554a2d10598e28bac396b8b611b8c9b1c6eaf3bfb4e0d22724c4175d18c2e16ea
diff --git a/sci-biology/beagle/Manifest b/sci-biology/beagle/Manifest
index 9834eb02d..a4cb8d549 100644
--- a/sci-biology/beagle/Manifest
+++ b/sci-biology/beagle/Manifest
@@ -1,4 +1,4 @@
-DIST beagle-example.sh 976 SHA256 d2748d065fc6669264a88b9aeafbb6a7d45609fc646fedd7773f1cc414a5ca6e SHA512 db07b8e7753b1fa7b314301227fd4da3f80e2f5ea47357cb7f17d1ab1ad11b498ff763d82dc034a3cdc914071285e8186dcc85d0e829b537a9407ce11a6e4e80 WHIRLPOOL d9ab743a2b18376d78672c5206d7c8afc51cc2ffde3314e494e5287dd169a48c57c0113290f9928c539316354c39d30984171b48e1463c0fe45f87af3ee2b379
-DIST beagle-release_notes.txt 1208 SHA256 f632bbf3d9531ef449ccb1ae14e5ec0ddd19fe41be83d8b973cda4f3379099c3 SHA512 fa347608eb76bea7ba65d8aa109a578ba43900e29b6854160b58acb2c78a19999542901e5f9ebe703d2feb5e46b60e318c23d78a5eb63ad6e7df1d9850902067 WHIRLPOOL 2366a37f477b6e78b9ea8b34a38e54db0e3fc0a67396d3374d6528d5a9c98cf8f44a3a9d4912ce227b13760fdc398b64ae3423c09f093887e0487394baf66330
-DIST beagle.03Mar15.pdf 655574 SHA256 e630b38f3c4eee884798e344a328fa6938453ff7595803de5647ac326711ee5c SHA512 78dfcffae1bdb29b7a9741d9a3610905222030d91ab74b7be09f46c9fc3742333f1f26d330c9fe532d9127771de2c36ffda229d8603b082478b5b90528c7a649 WHIRLPOOL 66977729d5233bf0935c0907fa005f90e2e70a05ada3f910aa45baa9f4541d3ba9fb47bbb839d13ed32e969eb8da77ca263acd26a72d75ee45faa2f28256f2df
-DIST beagle.r1399.src.zip 307214 SHA256 6e19b7b8e37a7c0d3e270a0f92425d1adc410920135630ac8fde719c0e4a9292 SHA512 b22b6ba3c67e01cf3e7c332723af781d32c3b2b9dad15b2eb1e1f47a216ff89911f89617eb95214723554059314dc312271a5320677937df48c7c4f3bb889253 WHIRLPOOL 805641ce255b5f3c8ae1d40f286e9442f80ee2cd78353e66ca5cf2b20de9441f8a9cbe05888ffc9d77cd8fc78d8eb2f36463d9a43cd3baa690463816090329d1
+DIST beagle-example.sh 976 BLAKE2B 36b38e68f18f4b1a488176d61a863c6d7312a3a89146ea8a15994db6dcf05afc74b7d5a207c72f3d49891a72a8b7f7199e7e7bfd0be124408db109503b7186d2 SHA512 db07b8e7753b1fa7b314301227fd4da3f80e2f5ea47357cb7f17d1ab1ad11b498ff763d82dc034a3cdc914071285e8186dcc85d0e829b537a9407ce11a6e4e80
+DIST beagle-release_notes.txt 1208 BLAKE2B 79340af75cd37c8d589d5eccb16b450d43ea6db94303a8686c135c3e699426d6711596282e392c1e718d76087c0203975e738de346392c48e3468ecd73616dbc SHA512 fa347608eb76bea7ba65d8aa109a578ba43900e29b6854160b58acb2c78a19999542901e5f9ebe703d2feb5e46b60e318c23d78a5eb63ad6e7df1d9850902067
+DIST beagle.03Mar15.pdf 655574 BLAKE2B 05839803105d07fd0b1c29a678b11e47596b02888bb743edece06e3e2faf1cf9c9fff839989e460b2966e8b1fb46cd3a5b2fda3ce3ddb2532394c4e2b61304f1 SHA512 78dfcffae1bdb29b7a9741d9a3610905222030d91ab74b7be09f46c9fc3742333f1f26d330c9fe532d9127771de2c36ffda229d8603b082478b5b90528c7a649
+DIST beagle.r1399.src.zip 307214 BLAKE2B a9adb8265aaad3df723d372107d6417a06778261e4be819f1840002643c4be2b0d246e42f30309fff7d4a9d7df30807bc8b80e9c04278d7d7d363a3d3535142e SHA512 b22b6ba3c67e01cf3e7c332723af781d32c3b2b9dad15b2eb1e1f47a216ff89911f89617eb95214723554059314dc312271a5320677937df48c7c4f3bb889253
diff --git a/sci-biology/beaglecall/Manifest b/sci-biology/beaglecall/Manifest
index c7ee33d22..40e4013f6 100644
--- a/sci-biology/beaglecall/Manifest
+++ b/sci-biology/beaglecall/Manifest
@@ -1,3 +1,3 @@
-DIST beaglecall_1.0.1_15Nov10.src.zip 109726 SHA256 c00125754dac6db36ffd982fd78140ceafaa3abf28b8e0f8e78fcae0f3e45985 SHA512 7a4485ea74f4ca5f00f952aa469d3f551d80a05bb4b0c41d3a9ffa680fac94a9d415595a6a46bc3048372af7de99aa14bc2c85f20d6a470ef2110e3c97d98236 WHIRLPOOL 0f0662ce403a00d9dff9928dab9910dc8ba355e76bf6332d43a40b12271069038acf7e0c477471c5c86b902872ff2e92a67a3fea55a504e034a7a28dbf7c69de
-DIST beaglecall_1.0_15Nov10.pdf 1134881 SHA256 82b491f72eacd8c6fa6b83900c42f94de06b9aafda55f94f3fa872e0de9f7a5f SHA512 70bc1c9a05bc28941ee0be428929cbf07e602fda0f3afabca383ad5df5461269e4415c3da25a57a6b5072647112464516cc052ef3fa2be3a642b765ba518deac WHIRLPOOL 119331ae25ae95de495fbdc4c22a6a345712e739ed495a3aa2f02102b5705ca1889460e01bfae1de0cc01361993a27fc9dc589be40aa9407d10e3399bde99f01
-DIST beaglecall_example.zip 1556387 SHA256 c125a36b3b08f9f68f44fbe26872276fee4ccb4db586569e6403555ec2ffbe10 SHA512 35e66ddfa67b13e0f076994773d99de7c0daacf0308204729cb6fefae011e50d3fc65b42205d00f9b82c83be8323b1def8cd3e9ba63b1bee87369f140b717b63 WHIRLPOOL f8cd72d928eda88a9d2ba0e15c825876704d5e59bec1e2bd3c924b7b67d9819f3a60a4ca2fd90e41b85deb3f171a66f375e1b445bc29409a75076e2473dca998
+DIST beaglecall_1.0.1_15Nov10.src.zip 109726 BLAKE2B 9c6dc1093a295cd96ac1216010eb3295208037f8e69ffc6b6b9f4c52da84222cbf10c71d0f731660955ab1d6cd4a3651e96147c37c426eb1f6d3dcbd53e64a47 SHA512 7a4485ea74f4ca5f00f952aa469d3f551d80a05bb4b0c41d3a9ffa680fac94a9d415595a6a46bc3048372af7de99aa14bc2c85f20d6a470ef2110e3c97d98236
+DIST beaglecall_1.0_15Nov10.pdf 1134881 BLAKE2B da9c4d25bdbc923b18e2cbcc54e7a1a4ba017a8548c99445054aab2eb439c503b52c82fb8f3aa2123fe67f4e41f5ebce96ddfe4943a68818f67ec5c7f5dff857 SHA512 70bc1c9a05bc28941ee0be428929cbf07e602fda0f3afabca383ad5df5461269e4415c3da25a57a6b5072647112464516cc052ef3fa2be3a642b765ba518deac
+DIST beaglecall_example.zip 1556387 BLAKE2B 9251766b9e32a4e06ee96987c070b4125a365ce354f3adc3a7e0a86eaf934840d3ed3265fd413857047a360a8ab18099aa49747879c048623f625e4c1ffdfd71 SHA512 35e66ddfa67b13e0f076994773d99de7c0daacf0308204729cb6fefae011e50d3fc65b42205d00f9b82c83be8323b1def8cd3e9ba63b1bee87369f140b717b63
diff --git a/sci-biology/bedops/Manifest b/sci-biology/bedops/Manifest
index 54a156cc2..66623b67d 100644
--- a/sci-biology/bedops/Manifest
+++ b/sci-biology/bedops/Manifest
@@ -1 +1 @@
-DIST bedops-2.4.26.tar.gz 27057360 SHA256 9b8ff43beec7b6e327179477b800a9c7ce98a010bbf59ba41fc2d7da9869586d SHA512 6c43ff4f42168da8e181e5d50e8d41a1c0a8c24bde3ca6ab81f9b2324d47b4f7d265e3031adf39ea7ad0e65773462d13ed59580774f5a0906b205b27648a8eaa WHIRLPOOL ad25d562dee5a51f10ee66d5a74984071b6aaddb1cde139b8fa2b420a2b6b10860c389eaf59f74c5fabc09851629f366747e7330432c0aa9c9d174606a3ffbfb
+DIST bedops-2.4.26.tar.gz 27057360 BLAKE2B dc5152ac9ac22289c90c866556b6741a6591c3a857730e1bde481adca86c6d2e15e8491fb0a1580c0d29609676c678d660f3eb6cd27f5bb36eda7fdb39cbb356 SHA512 6c43ff4f42168da8e181e5d50e8d41a1c0a8c24bde3ca6ab81f9b2324d47b4f7d265e3031adf39ea7ad0e65773462d13ed59580774f5a0906b205b27648a8eaa
diff --git a/sci-biology/bfast/Manifest b/sci-biology/bfast/Manifest
index 532e6e077..43bf85bb0 100644
--- a/sci-biology/bfast/Manifest
+++ b/sci-biology/bfast/Manifest
@@ -1 +1 @@
-DIST bfast-0.7.0a.tar.gz 2456617 SHA256 ed8de49693165a87d5dbef352207c424b1bf6f670a83acf49a4f4f188444995e SHA512 16e7ec5101c478f0dfc171016cbacb2b9240773e43b2d40eeb42d0e47afcee50a6dd5838e043a0326fc1ca9a87d3e55b42326a7f17b7c5654ef9825913860836 WHIRLPOOL f9098c00a2f328fd5116447aae86f0aed078f6c2e6a49a4459e09f0c2a2023e0d60be1893fc2337b85444c24efb2636953517eda2ced336d1bc6dc8d94706e6b
+DIST bfast-0.7.0a.tar.gz 2456617 BLAKE2B a841e7651e731dbb3faf22eb03dce5d2008c84f9a6198204d3c41aea26626058e3a23375bc0e7e8fc142d4898e09ddbb168016c71a7b79527e602e06ec329151 SHA512 16e7ec5101c478f0dfc171016cbacb2b9240773e43b2d40eeb42d0e47afcee50a6dd5838e043a0326fc1ca9a87d3e55b42326a7f17b7c5654ef9825913860836
diff --git a/sci-biology/bio-cd-hit-report/Manifest b/sci-biology/bio-cd-hit-report/Manifest
index ad2fe69ad..b04456775 100644
--- a/sci-biology/bio-cd-hit-report/Manifest
+++ b/sci-biology/bio-cd-hit-report/Manifest
@@ -1 +1 @@
-DIST bio-cd-hit-report-0.1.0.gem 8192 SHA256 2e518468a6de52991ec81288b9cefd6ed83a6e76104669c185d633bd2a074282 SHA512 e4790d8d54688752538c39d5efa9c83c18990aeeebf6b66d1dd749f8d404e51b9f61b1f931e9a10025508c4bbc773380cdbd7d6130a42f32c5f30cc5ea069174 WHIRLPOOL abd74e27927d3bc7e22d0b0c92bd6bec0e2dea9989fc3b1a71a8500745a917272f0cb186e9dd0e8be5e35210b26a9daa400d0283aab5bd96048e72f3aae4e8b7
+DIST bio-cd-hit-report-0.1.0.gem 8192 BLAKE2B 14a64c39e8ba3dbff1fcfe82e17e36c3eabd63efd6b8c1962f4cfca491e4d1dfb3cee3625fbc7c20ca5affdcfd7365d965843ab4fca1e394a8d5486c6847b207 SHA512 e4790d8d54688752538c39d5efa9c83c18990aeeebf6b66d1dd749f8d404e51b9f61b1f931e9a10025508c4bbc773380cdbd7d6130a42f32c5f30cc5ea069174
diff --git a/sci-biology/biobambam/Manifest b/sci-biology/biobambam/Manifest
index 7c29df1df..562f6adcb 100644
--- a/sci-biology/biobambam/Manifest
+++ b/sci-biology/biobambam/Manifest
@@ -1 +1 @@
-DIST 0.0.183-release-20141208165400.tar.gz 1100088 SHA256 9a35ff75183d327486e97f40fecb0cb138d1a7a81a2e9f6ad3a5db5723dac823 SHA512 64e05517754156c48116672e18d21ae59146a9544ae7bf3df115e6a6b475ec24d62043ac4e54417ce064d6e8acddba75698944865c6b407f64d40ff7e5dafa3c WHIRLPOOL c46b71ce89acb3a697ead6604e0e1694984cac1a8ed493b43d205b67db13b7bbb2ad6209dc05f98ee878bc37271b0bc117d5454707e0548cb1d179422b0545a1
+DIST 0.0.183-release-20141208165400.tar.gz 1100088 BLAKE2B f43e25c51c773b4ba5c086761758ddabd1b021efa51b0230fb60360845f4ed34f48004e9da0cec5d2a36586ca56f68732620bab3eb4d76c80a420fef867a1396 SHA512 64e05517754156c48116672e18d21ae59146a9544ae7bf3df115e6a6b475ec24d62043ac4e54417ce064d6e8acddba75698944865c6b407f64d40ff7e5dafa3c
diff --git a/sci-biology/bismark/Manifest b/sci-biology/bismark/Manifest
index c3ef5614e..c908dd10e 100644
--- a/sci-biology/bismark/Manifest
+++ b/sci-biology/bismark/Manifest
@@ -1 +1 @@
-DIST bismark_v0.13.0.tar.gz 1667188 SHA256 4266e7ece19bde693e9a0c15328eb3bde187031c168928a6e11ea2ba0ef95687 SHA512 5915e28a9647189d49c584cc0a90ee64ddd444e4acf9bc6c6ae25e1b01b18ab35ca1c3fa3b59834d641fa6c4a4b465d43f2908d3b23f1d45297d49323d3511c0 WHIRLPOOL d0e514dca8ffb8658194d63a067e9d131962e0c5c009cd9a026003ae9fa0befbc923935e0f81ece8c892f00925a7dbd27b65a55a0c040392caa83132a439bdf0
+DIST bismark_v0.13.0.tar.gz 1667188 BLAKE2B c72f59d35a91e6511a6f52d93547eaff9eba20688ec86c592019689625ce8f31a3ba802c62850421c185c03b285ed8a53549059c7e99779abc376523aff8b79a SHA512 5915e28a9647189d49c584cc0a90ee64ddd444e4acf9bc6c6ae25e1b01b18ab35ca1c3fa3b59834d641fa6c4a4b465d43f2908d3b23f1d45297d49323d3511c0
diff --git a/sci-biology/blat/Manifest b/sci-biology/blat/Manifest
index 5a6ed9d73..f37d442e9 100644
--- a/sci-biology/blat/Manifest
+++ b/sci-biology/blat/Manifest
@@ -1 +1 @@
-DIST blatSrc36.zip 3227463 SHA256 4b0fff006c86dceb7428922bfb4f8625d78fd362d205df68e4ebba04742d2c71 SHA512 18ebd1082aa3c44739ddbf31cba05aaf2d5e83bec0884ebd40dfb775fcf06b3b404192d8a63af062373a2f7fc0ce8844cbec6b7451d8576e21ddaa76750bbd7b WHIRLPOOL 87ee398237049dbbe52ed2712a35493432a6dc559287583d5124aad66c3fbf5d356e9b91f7843f77d33450193e3c1d837bb75d4d90ca1502e36d18d31fc28aaa
+DIST blatSrc36.zip 3227463 BLAKE2B a7cb55725ece7d08cebe0a4ba9b1d8498e2477032843ca7e7de35759bfa083f81d567a95865aa5c2c0b0f926c8087450caa2385bdda2e2d73edce307b1f7dc98 SHA512 18ebd1082aa3c44739ddbf31cba05aaf2d5e83bec0884ebd40dfb775fcf06b3b404192d8a63af062373a2f7fc0ce8844cbec6b7451d8576e21ddaa76750bbd7b
diff --git a/sci-biology/blue/Manifest b/sci-biology/blue/Manifest
index 91292c1f6..9130b6b5b 100644
--- a/sci-biology/blue/Manifest
+++ b/sci-biology/blue/Manifest
@@ -1,6 +1,6 @@
-DIST blue-1.1.2-Changes_for_Blue_1.1.2.pdf 310372 SHA256 c40a06a780223642152d30cf12c11b35af80c5778e2b584c490ded7acb962e36 SHA512 1f6d595018e880a9d10197816881fa88bbc1da9613fb83d0c3b77fe3ea22e614a9fc9783abfa7f649c242a4966a6929c53fcd1b845f98280d50c491b4cff8f73 WHIRLPOOL 7ead99964d95a3a6c77acde87c9b90e4d031838eb60e000f20c7e96f85e854b8118b57a0a69d4d927ece7e58fccfa322ce0b4eb9d7420f0bfb58f71b06ae7296
-DIST blue-1.1.2-Correcting_reads_with_Blue.pdf 560129 SHA256 4938a9e98851a8c13d96fd0ce3be15f97c00cb008751594884fa2f13bac9c561 SHA512 1341a7f3d4c77b3a3f8d66f57b4cc976930bf7d28219d77a3a91efde0bc76f08bf0159c98df3227a2484dc0fe7d40904dbbde74dc03b6c110649285314a07585 WHIRLPOOL e6089c2e895d7c693c2f2dd30ffe7c3911d9cc67f971e9da8551333f75b99a35927927a3cea728438de4310acc9da4ad99e51ec75ac49acd306a60b53b395f9d
+DIST blue-1.1.2-Changes_for_Blue_1.1.2.pdf 310372 BLAKE2B 4c3da1739a89d6b8b8b3b15d3244c65795269c6696d87c9c3e9ff32aa7e96de8cc44e1b929a3b03669d70dc78a476dfc067f903814b013c8dbf7d58e0cef549c SHA512 1f6d595018e880a9d10197816881fa88bbc1da9613fb83d0c3b77fe3ea22e614a9fc9783abfa7f649c242a4966a6929c53fcd1b845f98280d50c491b4cff8f73
+DIST blue-1.1.2-Correcting_reads_with_Blue.pdf 560129 BLAKE2B 19b58a7276ed0d2ae47caade89e4de94e9c085a7e3f5aa824d643e507e447393d5f56e89deeccf5e920d39f604adab059b6b7a74f9a9c792673b2b2b31289210 SHA512 1341a7f3d4c77b3a3f8d66f57b4cc976930bf7d28219d77a3a91efde0bc76f08bf0159c98df3227a2484dc0fe7d40904dbbde74dc03b6c110649285314a07585
DIST blue-1.1.2.tar.gz 658544 SHA256 c038fa9fd76330cb70059cd47979327708368e2d6b6d7edae00825ba39dc23bd SHA512 933b2a8bb1e1f3fed241cff2eac9566d49d77c3f97b2f22f4a8194f3cdf25c09ae474b4d681ff65914d695598579fded6433f6a47ad06b78879c36d58402ea4b WHIRLPOOL 32c89ae39cfadab9beae038afd530cf85d8c8775a84bd5e2c29a2e67246d9b09d5c872492c1836dfab6fe20e9f59a1b0aaddc5dc051393030ccff39bb08fec8e
-DIST blue-1.1.3-Changes_for_Blue_1.1.3.pdf 310372 SHA256 c40a06a780223642152d30cf12c11b35af80c5778e2b584c490ded7acb962e36 SHA512 1f6d595018e880a9d10197816881fa88bbc1da9613fb83d0c3b77fe3ea22e614a9fc9783abfa7f649c242a4966a6929c53fcd1b845f98280d50c491b4cff8f73 WHIRLPOOL 7ead99964d95a3a6c77acde87c9b90e4d031838eb60e000f20c7e96f85e854b8118b57a0a69d4d927ece7e58fccfa322ce0b4eb9d7420f0bfb58f71b06ae7296
-DIST blue-1.1.3-Correcting_reads_with_Blue.pdf 560129 SHA256 4938a9e98851a8c13d96fd0ce3be15f97c00cb008751594884fa2f13bac9c561 SHA512 1341a7f3d4c77b3a3f8d66f57b4cc976930bf7d28219d77a3a91efde0bc76f08bf0159c98df3227a2484dc0fe7d40904dbbde74dc03b6c110649285314a07585 WHIRLPOOL e6089c2e895d7c693c2f2dd30ffe7c3911d9cc67f971e9da8551333f75b99a35927927a3cea728438de4310acc9da4ad99e51ec75ac49acd306a60b53b395f9d
-DIST blue-1.1.3.tar.gz 717341 SHA256 42c5b3a2156712e34d0537bcdc97aedf72ea0ab363527f1448e20969ebc4b355 SHA512 fc51965a063ced80304b3e59eb538742f6f4a2970d02cecc346aa8b15e961a242b6ce6cc3a847c8e4f478bee997ed5794f304d201554398130c1a16bceb84c30 WHIRLPOOL 087552bfd7f9e9b9be578519cdb31802cec82b140da80bdd30f9b0fe14cdaeea58b0277e33c6c3603201e293d463ec03631fa1395334e8f38f812ed97b6f04af
+DIST blue-1.1.3-Changes_for_Blue_1.1.3.pdf 310372 BLAKE2B 4c3da1739a89d6b8b8b3b15d3244c65795269c6696d87c9c3e9ff32aa7e96de8cc44e1b929a3b03669d70dc78a476dfc067f903814b013c8dbf7d58e0cef549c SHA512 1f6d595018e880a9d10197816881fa88bbc1da9613fb83d0c3b77fe3ea22e614a9fc9783abfa7f649c242a4966a6929c53fcd1b845f98280d50c491b4cff8f73
+DIST blue-1.1.3-Correcting_reads_with_Blue.pdf 560129 BLAKE2B 19b58a7276ed0d2ae47caade89e4de94e9c085a7e3f5aa824d643e507e447393d5f56e89deeccf5e920d39f604adab059b6b7a74f9a9c792673b2b2b31289210 SHA512 1341a7f3d4c77b3a3f8d66f57b4cc976930bf7d28219d77a3a91efde0bc76f08bf0159c98df3227a2484dc0fe7d40904dbbde74dc03b6c110649285314a07585
+DIST blue-1.1.3.tar.gz 717341 BLAKE2B 0be8bb8b8e30b7185cc01c8b9affe39521216cd3d487ad2952af28271d955eadd14f74cdaeb3ce47324845defadc1091fc230923ba30138a990003dff8f82105 SHA512 fc51965a063ced80304b3e59eb538742f6f4a2970d02cecc346aa8b15e961a242b6ce6cc3a847c8e4f478bee997ed5794f304d201554398130c1a16bceb84c30
diff --git a/sci-biology/brat/Manifest b/sci-biology/brat/Manifest
index 7460fc560..1e584777e 100644
--- a/sci-biology/brat/Manifest
+++ b/sci-biology/brat/Manifest
@@ -1 +1 @@
-DIST brat-1.2.4.tar.gz 3776812 SHA256 81ce3a66a0d410be472327bba4b9a6a782c958a0c7a51944c7f671942bafe335 SHA512 1edd30fe19db2e5e8bf41f431110a087869574959ea809d021e65047f2397929e32dfe3bb0c77c6404f738691e1306a8a22ed901d6b9b35d94231e4ed0782635 WHIRLPOOL c5c19e2ef1e4fae98aeb9e5824827a992a05aacfda3ce6cc593adcdd739362f33cec95e5136f4087e755ba7bc8ce7a0630107c7175c9f1313676ee357a38a8fd
+DIST brat-1.2.4.tar.gz 3776812 BLAKE2B b703b4c2fe3a414052d7f64003ab97d66b09b8d8321a6ff62fd16f6de0c26cea8de9acb6cf01639b39e454224e8cb659138aba6885bb12dfc5712c56476d0243 SHA512 1edd30fe19db2e5e8bf41f431110a087869574959ea809d021e65047f2397929e32dfe3bb0c77c6404f738691e1306a8a22ed901d6b9b35d94231e4ed0782635
diff --git a/sci-biology/brat_bw/Manifest b/sci-biology/brat_bw/Manifest
index 0e9ad7816..237763045 100644
--- a/sci-biology/brat_bw/Manifest
+++ b/sci-biology/brat_bw/Manifest
@@ -1 +1 @@
-DIST brat_bw-2.0.1.tar.gz 4459473 SHA256 f7a51e7b62bbfe5038beaf594cb478c21fe137518eaa06de1e95dbe298ee357e SHA512 35feee5f341f088afb84d0baa55ec12e53566827b549dfe241946c72978e59be5ea63cb06940ca00bc3b923ab87b4aba6aff23bd95b00004ea779dda576db909 WHIRLPOOL d965aa4ee8d79271d8fb033d440170b34b87e7a379836dc6f0c3f3889c9cd872a2412710d3c968c018204d01a6ec38279ad67d312d144c6f7fd2aeb116846eca
+DIST brat_bw-2.0.1.tar.gz 4459473 BLAKE2B 1d2574ff56a334f258db7b8ccdaac0e125f79409b9a3c052fdf5b9f5af5f53918acb2ee2c76453eaa670944ff5ab66c0b9197684b5b420d8a56fa08d43306842 SHA512 35feee5f341f088afb84d0baa55ec12e53566827b549dfe241946c72978e59be5ea63cb06940ca00bc3b923ab87b4aba6aff23bd95b00004ea779dda576db909
diff --git a/sci-biology/brat_nova/Manifest b/sci-biology/brat_nova/Manifest
index d7b05646a..5916aa9b8 100644
--- a/sci-biology/brat_nova/Manifest
+++ b/sci-biology/brat_nova/Manifest
@@ -1 +1 @@
-DIST brat_nova-20160103.tar.gz 67569 SHA256 8d34932ca1edfcba9d80e91cf603e482c4d82d196e1b6f5ca51948395c2b162d SHA512 80c8228261d2b3465469dc0022c1e1ddff42cb6656913915c63a2ad405e7208ae6e1106edaf267a4f92f94839e8de355d3dae297cc96c95dda000bff5bfec10b WHIRLPOOL e14c15f35eca40e50f4d74651008f63c3e846e88133c771f788f4bee5d82d2f45d3172d4f807bb49a27261276e64c5175ed112f8aa3af47adb6b528166ac879e
+DIST brat_nova-20160103.tar.gz 67569 BLAKE2B 06f270c70b3fd2326e783ffbcc5a6fc513fe5eb0162f7a44f2f982a3af11824bb68106ac7001aaeb9e90de2c694691093bae2815d7e57e1e5536a3cfa3f431c7 SHA512 80c8228261d2b3465469dc0022c1e1ddff42cb6656913915c63a2ad405e7208ae6e1106edaf267a4f92f94839e8de355d3dae297cc96c95dda000bff5bfec10b
diff --git a/sci-biology/bru2nii/Manifest b/sci-biology/bru2nii/Manifest
index 002fcbc8d..36a460bd8 100644
--- a/sci-biology/bru2nii/Manifest
+++ b/sci-biology/bru2nii/Manifest
@@ -1 +1 @@
-DIST bru2nii-1.0.20161212b.tar.gz 2604936 SHA256 04d83953b5ae00f8ec0d3086f7d9dee101d1425bda4dccc00eeb8deb3f460151 SHA512 d35a21a5b07c8d30043c2696369508d3440ead31206aabd79b259a5ec5b6ff0c05f92b748066b236ae08048b02683dc3af91983985e59fe4365f67f869bcd330 WHIRLPOOL 7982ccf51c695a67f122f0a57bc955d7e2057849c1661326a867569f78802f55e467d65fe28a749d0e7c747eb1c866e64322629fb2a731f7525b26b7ed5b8900
+DIST bru2nii-1.0.20161212b.tar.gz 2604936 BLAKE2B 868540aab5e69d0f3e8e02d754b6df109c1d88cde3fef761f67d7b120d97543292258eb1ad8ff230dbcb0a4d769cf9d90049db3da6d7f51ce28b1277cb66a136 SHA512 d35a21a5b07c8d30043c2696369508d3440ead31206aabd79b259a5ec5b6ff0c05f92b748066b236ae08048b02683dc3af91983985e59fe4365f67f869bcd330
diff --git a/sci-biology/bx-python/Manifest b/sci-biology/bx-python/Manifest
index 604cca2f5..a55f1f0a3 100644
--- a/sci-biology/bx-python/Manifest
+++ b/sci-biology/bx-python/Manifest
@@ -1 +1 @@
-DIST bx-python-0.7.2.tar.gz 939454 SHA256 b083b2c87807bbfa5b11196754768147ca5bb15001cb0dd76ef217065b4ca451 SHA512 6757250909be72daf61daef865b4c5ee29a823ca7444a70b17dd25db8cec22e39dd0b93186634a9ed9ac036fdb7054e225270141c9ffd63a231d82f0eee8c8cd WHIRLPOOL 3f795403c82b4bcbf45e32fa0e56869fac0069be99919586655dd5c5b9f72d295826ef0dc64127127d665c7d4280a8c7ddebe8b8a70bb8ef03da8d4e768e2bd3
+DIST bx-python-0.7.2.tar.gz 939454 BLAKE2B 2c1fbaa279a26951a7db3fe952296cfd0e3022124c51850521def385180ce2b8bde183ebba8b9029c11f1a6c729947464dacde8889748ae110d75ecb263d1d7d SHA512 6757250909be72daf61daef865b4c5ee29a823ca7444a70b17dd25db8cec22e39dd0b93186634a9ed9ac036fdb7054e225270141c9ffd63a231d82f0eee8c8cd
diff --git a/sci-biology/caftools/Manifest b/sci-biology/caftools/Manifest
index dbbbb7f44..761665281 100644
--- a/sci-biology/caftools/Manifest
+++ b/sci-biology/caftools/Manifest
@@ -1,2 +1,2 @@
-DIST caftools-2.0.2.tar.gz 2645554 SHA256 7be5eafbd6817a7869f73c7540b5fdfe184b0be28624cc6ca9a01c52a140d4a2 SHA512 0c1a7f2127538ef932139cfee6bc6acb2411765d1006d508e65647ec74d1677a6ecd25b98cc37075bd8e5b0b1a245c11c1029cbbc51eefb46023bd121fdb2f1d WHIRLPOOL 84313e00f6f4c018bc65b6e173827a6e1ef8fd2dc5e5e63e186fb56bc9e5b66b2f25037a1536a8cb57af71603b31ed74ff505dbc43d4deb7d2eeae57ea729bfe
-DIST caftools-2.0.tar.gz 2644892 SHA256 b41f323ceb3fd260d6c2ecff1f285548f40301065cea54687eb96717534eaad9 SHA512 0b2b5d09d503b900b275efd61dfa1c5b01259e53c392d68626d9c5081add27ca87b324b5702ec18293415b788208c547eb31e461861f1244b759e28221244417 WHIRLPOOL 13c2e24ce803c09f1d596a4c05f146b869e5ebdeff9f648a0468853feb7d142927d3d78339ac2414482335e5f7ca8352ea9b196f8542f4b3ff5e36fef762398e
+DIST caftools-2.0.2.tar.gz 2645554 BLAKE2B a48d8fb71500b5dc07da37467a9dc8d5972dfd7f63ae19cf7ca016774c3a23c4a9cd0f4caa1bde8efe5ef74c2576b8143f8b7375f9bf34414edcb14ed34a17d2 SHA512 0c1a7f2127538ef932139cfee6bc6acb2411765d1006d508e65647ec74d1677a6ecd25b98cc37075bd8e5b0b1a245c11c1029cbbc51eefb46023bd121fdb2f1d
+DIST caftools-2.0.tar.gz 2644892 BLAKE2B 76aa90bf18d7543eb8f39de3e3be5fbca9a549e47341b032dd569394865ae02e269ea54a607acca2d88d404d271f78e1b97399bc8bdc1a107937163c89642323 SHA512 0b2b5d09d503b900b275efd61dfa1c5b01259e53c392d68626d9c5081add27ca87b324b5702ec18293415b788208c547eb31e461861f1244b759e28221244417
diff --git a/sci-biology/cast-bin/Manifest b/sci-biology/cast-bin/Manifest
index 249814a7c..cfa37a620 100644
--- a/sci-biology/cast-bin/Manifest
+++ b/sci-biology/cast-bin/Manifest
@@ -1 +1 @@
-DIST cast-linux.tar.gz 369636 SHA256 566ea6bd09f4621343189372df63f62eaa6cd6baefd785eb8421f99a099c5708 SHA512 85f3b4499afa7ff34f9401253c8f3c5a73c45868ed9a980af8246a00a3f05f25ddf5358c910a4aadd7057ea1614a597a2d5af5fafd119a7b2de47b9d434f3028 WHIRLPOOL 90279c555dcecd5fbee862f6a6010ffc73be0fe034495b978e3aa5f346a671d986a9d88fc1ea2ccd34978e193a3cb59dd93827847d7fd5bdb776029340ad2324
+DIST cast-linux.tar.gz 369636 BLAKE2B dad6b91cd0ec7509eb18306232085a8805c89fc174e016484f8946e2e2cfdb50d0863535dfd36f2e53a34844c849d1da8e76c9b85a45ff0b327d8a3e673c645a SHA512 85f3b4499afa7ff34f9401253c8f3c5a73c45868ed9a980af8246a00a3f05f25ddf5358c910a4aadd7057ea1614a597a2d5af5fafd119a7b2de47b9d434f3028
diff --git a/sci-biology/cd-hit-auxtools/Manifest b/sci-biology/cd-hit-auxtools/Manifest
index 628b4cbe9..703087663 100644
--- a/sci-biology/cd-hit-auxtools/Manifest
+++ b/sci-biology/cd-hit-auxtools/Manifest
@@ -1,2 +1,2 @@
DIST cd-hit-auxtools-manual.html 27123 SHA256 a17d1ff54f061ced8b3f797238ee5596330cb2fdb237d8fbfdff7e2c47c06d14 SHA512 8b7b646ac63cb4cc888a2b3db0ef2e1feb215189b9a52ed5a760ad5dd1af4f0a0f7722b3fa7b634f8a84e3154622c4336401dfefc45fe614770917ef1d59429a WHIRLPOOL 1b8149b66353ce58f074f412a33726b583497da2b204377e9b639eb2082e78c442e68af3b9d6bcba324373755b75a4b3aa51516f5f771e7d65d14675e76916f6
-DIST cd-hit-auxtools-v0.5-2012-03-07.tgz 97230 SHA256 acacb96344eeab2a7cb20613961f0355eba1f5c1f5793f100a252c8c45e4a6ad SHA512 5b00ff4951c9f2b85b23bad7eae484c060f05df8a20c35bf1cff0bae770a6552b7ed19c90bbc36204ea3ba1722490c8ba654c7ec1b1d55f743afbc82be53ef5b WHIRLPOOL d5ff22b2c1fa77089e4543c905e3dacd37769d5e07b2a1ac85651ea8b057d39bf44997590afb12e4757a3482bebc0a63233272c2ae0e95eb88c584dcc0c49084
+DIST cd-hit-auxtools-v0.5-2012-03-07.tgz 97230 BLAKE2B cbc3032dcf02d4919a44d976f7fe2faa8f767e96149bd6eab9aeef1e0a7231e96cef7a87bca9ba8417b87d4b2f28d0a554d863b4efc65882eff1ee7b890c4bfe SHA512 5b00ff4951c9f2b85b23bad7eae484c060f05df8a20c35bf1cff0bae770a6552b7ed19c90bbc36204ea3ba1722490c8ba654c7ec1b1d55f743afbc82be53ef5b
diff --git a/sci-biology/cd-hit/Manifest b/sci-biology/cd-hit/Manifest
index 7bbf8864c..76a4f8ff6 100644
--- a/sci-biology/cd-hit/Manifest
+++ b/sci-biology/cd-hit/Manifest
@@ -1 +1 @@
-DIST cd-hit-4.6.5.tar.gz 1148585 SHA256 3891497fa81ae67d59fb4dc301740bc21aa3823df792138ab5f2038831faa899 SHA512 d9dbcc61db36c67ccf4fc01f13c5a1a25d246ce60608ba1ac9eb8df4430c92fc70726b8adeaf5cc016025a07aa1d3f675a3636c5439cf3705992753497e319da WHIRLPOOL 3d52f7a12a21aa6b0ca2ae709034bacf1261245fe5c4aa80a707482be3808f5447f23199a013d92ac5aeb2679d0b83df9921b46a8a0a9393cc9094216a7294e6
+DIST cd-hit-4.6.5.tar.gz 1148585 BLAKE2B fdfb107957686bf23fab33e62a66c59c4f90106f22ef147b63d40e8cfba088293a979c58ff9909d436eb7fec7b33eee214a985b683038676ec631074d7f1e42c SHA512 d9dbcc61db36c67ccf4fc01f13c5a1a25d246ce60608ba1ac9eb8df4430c92fc70726b8adeaf5cc016025a07aa1d3f675a3636c5439cf3705992753497e319da
diff --git a/sci-biology/cdbfasta/Manifest b/sci-biology/cdbfasta/Manifest
index ec33180de..bac1bd267 100644
--- a/sci-biology/cdbfasta/Manifest
+++ b/sci-biology/cdbfasta/Manifest
@@ -1 +1 @@
-DIST cdbfasta.tar.gz 59735 SHA256 68767e8b2fb9de5a6d68ee16df73293f65e02f05cf2f747a9dd6b8854766722c SHA512 500b3cdf4bf4e21c78a285739c6544e3f2bed377f8e3858c8ace240a9107d765c89cff8004ca2ea001860abc04fc48bc37c03569da5b16115f4419f5fd9bcd5e WHIRLPOOL 3c5beff7ea7d7c6dd6f71755cbb5ea4fabc2ee16aa8d6711906b1a092668cfb889ba56605117133b7e32ab50d6a4986e454f94e32bcd57a5508f1f93788a9dec
+DIST cdbfasta.tar.gz 59735 BLAKE2B 69107a42e1b8069a70de9333891e050785cabaf6457245b4512c3725dc576ebfba54c43c3d1e356948061cf903a89a8aa0f011efbf36a4cda6b40a623f7019fe SHA512 500b3cdf4bf4e21c78a285739c6544e3f2bed377f8e3858c8ace240a9107d765c89cff8004ca2ea001860abc04fc48bc37c03569da5b16115f4419f5fd9bcd5e
diff --git a/sci-biology/cegma/Manifest b/sci-biology/cegma/Manifest
index 5d2fcfa63..0c05b71b5 100644
--- a/sci-biology/cegma/Manifest
+++ b/sci-biology/cegma/Manifest
@@ -1 +1 @@
-DIST CEGMA_v2.5.tar.gz 12751140 SHA256 dd7381c0402622645404ea009c66e54f7c915d8b80a16e02b8e17ccdc1859e76 SHA512 b38772a80b40be08746d4d19e21f5a5c738baab14c496d9b024e3a248965f431669b90f3e811433a086021fcc5d364fd8fd87111d47f8764497093e1d8207c2c WHIRLPOOL a0e9f30a6e023cc7cc363e095532f94b6801d8fb1d1dbca3f3b67ac4fb132537ce6dc3baa1514a8930c865b61d848244a0c375b798cfeb99dd812f6f08399ab7
+DIST CEGMA_v2.5.tar.gz 12751140 BLAKE2B dbcd8e6f4a5b027b96e3fa6fa7ddee854d10b0d10b7b1428ef7cf5bf38971473c2b941e6d2e66b75e06c1c35f023beeb227675a871094e9312522bca1abf1f27 SHA512 b38772a80b40be08746d4d19e21f5a5c738baab14c496d9b024e3a248965f431669b90f3e811433a086021fcc5d364fd8fd87111d47f8764497093e1d8207c2c
diff --git a/sci-biology/cg-cat/Manifest b/sci-biology/cg-cat/Manifest
index f1d64bb80..2125e4476 100644
--- a/sci-biology/cg-cat/Manifest
+++ b/sci-biology/cg-cat/Manifest
@@ -1 +1 @@
-DIST r2cat.tar.gz 409067 SHA256 d7db5b5a5c8475b5f7e8f49f474be01b7bc785b43a4ae68bd7de5672e7d491f3 SHA512 a837d216664fede82e147204e8f1ba07b2d5ad92ee3db6f3a1285ff4acc4fb5b70715ac272d727304901548d68cb4865c051ef24690226692c4c4d693c7988f1 WHIRLPOOL 34a103cce1556fa8fef9f1d087ea5dad307497c39f00f2e04474592faada8d515cc6022a4bcc2656e3997e4891692240cdde21711d091464cd3f88a739d4bb0a
+DIST r2cat.tar.gz 409067 BLAKE2B 18cffbc3ecf9655b3155a85495ee5be6f87735ebc9311588ee92b6e1c4130152c3f08d974854ceffe58201b9a232f70ae01fadcb388da20d222e156ce76f5bc5 SHA512 a837d216664fede82e147204e8f1ba07b2d5ad92ee3db6f3a1285ff4acc4fb5b70715ac272d727304901548d68cb4865c051ef24690226692c4c4d693c7988f1
diff --git a/sci-biology/clover/Manifest b/sci-biology/clover/Manifest
index 4a3827eb9..5134912e0 100644
--- a/sci-biology/clover/Manifest
+++ b/sci-biology/clover/Manifest
@@ -1,2 +1,2 @@
-DIST clover-2011-10-24.tar.gz 15843 SHA256 52ba95c118a32e6ea1097f356dfb0277be4464b834285f65eaaebcf8f504a93e SHA512 edf773943a33d58b07b7a47ca9e6c0fe08715d7f445ef1283848a14eb72d084b2113a911f23bc484b3229ec14b8eeb50d460c6b9fef89db2fa031ea059b36b93 WHIRLPOOL 785c7273c10bc6e4261e91a9dae224ff595aad3f033fb03edbe403d8cb97b456c0fe285e1a537bde3508e5e4a8f2ea5aa442fb3cb72640464df2a24da8be0ae0
-DIST jaspar2009core 54400 SHA256 a76cd1462e7b9c38f64e2049593d21fa90479b968c7997ca3d83f8489327b981 SHA512 621eac23fb0db78391d3d51471f03eccc791e1b348b23b5d9dae32b082c8301e847ee1eea4a76ac188796b639125a0970e5f0b3c0d3c673ae6f6634856c980a0 WHIRLPOOL c148ee32894ec1bd55a4665fd516eb82e6e5904e6a74bb6248d70ef7fef1a1376888a6fe53bcd959faeb8665b7c2bda3668f6801ed2e07c2c445a241a1ebcc4d
+DIST clover-2011-10-24.tar.gz 15843 BLAKE2B 954817e40b49f63d7e3c1c98a82bcc5c56fb695e9428c16244f8c6f82f41cdf80584b933f01f6aec5b08bcfe8a15f193e63af90b9ac16071d57e7bbbbb4cffc5 SHA512 edf773943a33d58b07b7a47ca9e6c0fe08715d7f445ef1283848a14eb72d084b2113a911f23bc484b3229ec14b8eeb50d460c6b9fef89db2fa031ea059b36b93
+DIST jaspar2009core 54400 BLAKE2B 0260a968b212499ec287821dadc74bff908d4918668025639aa6528b6eb29b4a499762b25ed544ffab2938cbdcea645af23d7f50c8143ac6aa3dfa11388d25aa SHA512 621eac23fb0db78391d3d51471f03eccc791e1b348b23b5d9dae32b082c8301e847ee1eea4a76ac188796b639125a0970e5f0b3c0d3c673ae6f6634856c980a0
diff --git a/sci-biology/clview/Manifest b/sci-biology/clview/Manifest
index fcf090f45..271e4eb76 100644
--- a/sci-biology/clview/Manifest
+++ b/sci-biology/clview/Manifest
@@ -1,2 +1,2 @@
-DIST clview_linux_i386.tar.gz 1050318 SHA256 0ee2f0688afcf649b448662e792e5d44378e9d84d2141ecd3ad8c8d5c6a400e4 SHA512 2fbd5ed5ef7bb96a715537a1b1d8f0957e5733d2603aacc5a0dba5a5002a27483ca57dd53780204a98d5ce05ac1090e3d04a3b2784cec021f0afc545e98b35b1 WHIRLPOOL a0927f8a54e019f9ea8c1104629bfed624811cc2423b277d22c56b2047a7a579d7a0413d0a6d203bd4c2fe626e47777853564c907f735418365da6cd7252e2a4
-DIST clview_src.tar.gz 62178 SHA256 52936fddb0284b1cf2515b4e57e01ee9ec2a58dab329e49204d70528c75d5bf2 SHA512 24c115b76041981d6dba731180485108d92cccc4719fe6982a135d73c3d18deed2e89ebb6d7daeb8d79941084ec912be2c3333369ec0bf403f96a156932909b9 WHIRLPOOL e59c56be971e90d7598cbb178693906b4303140e9bbe5192199aa1cb20b8030bc971dbb3b3c45f5660b2bba1b0327f012cd8d7db1c817be6dfa001bed081b556
+DIST clview_linux_i386.tar.gz 1050318 BLAKE2B c5c52662df29a0f70a5355c0f2f563e8fef0ec473a707aed0c51d79bd1f1d7e9555139a21bb0c83c509fbac549d8c532d2af8d9ecb9af77b329be581f255493f SHA512 2fbd5ed5ef7bb96a715537a1b1d8f0957e5733d2603aacc5a0dba5a5002a27483ca57dd53780204a98d5ce05ac1090e3d04a3b2784cec021f0afc545e98b35b1
+DIST clview_src.tar.gz 62178 BLAKE2B b116a03c6ddba0caf77168fdd9e39bb86f4b1eccc0535dcd9f81a1e7c2a9b81c1219a4786ae37944abeb4913633acd9cf6b94824adba9851359a955440d9f21f SHA512 24c115b76041981d6dba731180485108d92cccc4719fe6982a135d73c3d18deed2e89ebb6d7daeb8d79941084ec912be2c3333369ec0bf403f96a156932909b9
diff --git a/sci-biology/codonw/Manifest b/sci-biology/codonw/Manifest
index 8e319965c..ee248c8c6 100644
--- a/sci-biology/codonw/Manifest
+++ b/sci-biology/codonw/Manifest
@@ -1,2 +1,2 @@
-DIST CodonWSourceCode_1_4_4.tar.gz 161908 SHA256 951e2a686f7849e0fa225b83b09842d4cf822ecafd67bff0438fc815512183b8 SHA512 31e596089b0ebb9e30b2d73727e15d28042debdecbde8f7e5b68f3e6ce863d1a865f4c6480d337d87cbac1a90b92357151361340887ac9f3175503f72cf2d6bb WHIRLPOOL 4c1fc51e2deb7c6a3b7f4eb38d8454f77a8bcd160e23c975b3270c9ddcf82bdc003871860721ba72535f83d2a53465f2305358fdb9a9d87f642ee4c349ad8168
-DIST JohnPedenThesisPressOpt_water.pdf 1814403 SHA256 34e1e09280ff0a0fcc07ab422b0a6886f4aae964ff7021bbd3463eec8101ee24 SHA512 293c174eaed3048f0cc34458d9230356fb3fbe110777dbeb01f7b22c964209773773d8707231326986c70753c9f463fb9d361567b4e117520dc0f5bd3dde5c53 WHIRLPOOL 5f7790338712ca2fbec8a5278d1513ada1ea34c6d8110740dd946ee0277421450ea9c03cbc70a5431f2c65139eb1622c7144f911dee058d30de70f1dd8f5b1e8
+DIST CodonWSourceCode_1_4_4.tar.gz 161908 BLAKE2B 9bc4415cd29d96cf4c061a0409f04858f4b2a6ccace4dd51fc2d8fbf9bcd3bdbaadf68d0e93560680dcee03178b9ab021074052a6ab69972f57f3e52c01e9326 SHA512 31e596089b0ebb9e30b2d73727e15d28042debdecbde8f7e5b68f3e6ce863d1a865f4c6480d337d87cbac1a90b92357151361340887ac9f3175503f72cf2d6bb
+DIST JohnPedenThesisPressOpt_water.pdf 1814403 BLAKE2B b268a297faf04bdf62c55d3f27b2c8c28229a7dd485c7d54340faa4b8baf76ab8a7b0954f82173a1d31c973614e7091032043b9ccc77cc77cf3743f83a8f8d9c SHA512 293c174eaed3048f0cc34458d9230356fb3fbe110777dbeb01f7b22c964209773773d8707231326986c70753c9f463fb9d361567b4e117520dc0f5bd3dde5c53
diff --git a/sci-biology/conform-gt/Manifest b/sci-biology/conform-gt/Manifest
index 28c2db2ae..11bb1ffa0 100644
--- a/sci-biology/conform-gt/Manifest
+++ b/sci-biology/conform-gt/Manifest
@@ -1 +1 @@
-DIST conform-gt.r1174.zip 128608 SHA256 d9f9447514c0825bf156581e38db81325b898145a6f74c34a8af411389571f78 SHA512 8547f122c4298e19d5284969ca7410d7a1581028e8155b554acedff16fed5d07ddb4f6f8e986279b8fec5012d7d95d278abd9af4049fa9d0ea08e5dfc775fffc WHIRLPOOL b5101faedebf87cfa4483a202442768e95c7d0607d26766d8b492da8b3a908e2aae48394bb913e6144abf513537bba4b11adf2ba458e8c4aa1eee68f16944ee5
+DIST conform-gt.r1174.zip 128608 BLAKE2B 54af005bdb32f76d6d255965bfda186c0b1fca9907d55a54d280eeaf7a26988efa7d7877400d62bb42f91dd73bea3f3ec913e29f7e2fcbaf877cff6eaf82241b SHA512 8547f122c4298e19d5284969ca7410d7a1581028e8155b554acedff16fed5d07ddb4f6f8e986279b8fec5012d7d95d278abd9af4049fa9d0ea08e5dfc775fffc
diff --git a/sci-biology/conifer/Manifest b/sci-biology/conifer/Manifest
index 879d39466..6b6b76c59 100644
--- a/sci-biology/conifer/Manifest
+++ b/sci-biology/conifer/Manifest
@@ -1 +1 @@
-DIST conifer_v0.2.2.tar.gz 23105 SHA256 161306acd7d61d05e651edf8c934341b807cf5e117c23770322651c45f92110e SHA512 deb2f1b3bbcbbd2911f6c8e2cae0ee6175782d0d3370fbca9b3b99b0f2e71fc92ddc9bf6e19bc83916e5a73800063ce05e20d488d12de6014148247e5c359838 WHIRLPOOL 604edc24c6672f954abe2172e83f1b96cfbffa72e9bdf223a47c48c5dc6301002183c653cf056503eed61edba8bef046aca30666a7a7c64d8fb4217028e09efe
+DIST conifer_v0.2.2.tar.gz 23105 BLAKE2B 66c60b294e268bcb08cd9feafcbc805627e6f9a96c555383a6485bdac09497ff8b787b23c81f7a34c11499371a48be778486892014c620c0c611008d2e53856b SHA512 deb2f1b3bbcbbd2911f6c8e2cae0ee6175782d0d3370fbca9b3b99b0f2e71fc92ddc9bf6e19bc83916e5a73800063ce05e20d488d12de6014148247e5c359838
diff --git a/sci-biology/consed2gap/Manifest b/sci-biology/consed2gap/Manifest
index be8fc92a5..f7e07d291 100644
--- a/sci-biology/consed2gap/Manifest
+++ b/sci-biology/consed2gap/Manifest
@@ -1 +1 @@
-DIST consed2gap-20050520.tgz 2963585 SHA256 47f97b9a678f3e83d0df15a99963852f7ddb448b877e93a02c2140d4638ef6e0 SHA512 be994e85c8e06fc1ea21187a206985c4deab0e3f34723df663959f553a007c836368f700e60c81a8f1bfc715d940025ec0347a6a6fefaffdd02a390bfba7541f WHIRLPOOL 540d8c1be1a2ab953d2cd3aacd16d2c0f776a43359509ab45591a9951ca9f48fb843bc00c9727b6b0a1ad392340c23efcd97b23677999fe0fc77e7e76afd0329
+DIST consed2gap-20050520.tgz 2963585 BLAKE2B a5320f06e1879b8f59f8681b258081814cdf27508daa906f3790a5c24f6f2b145fd034cedcb414108333d1070ab2bd4be129528902338d0691be8fee59b2dd35 SHA512 be994e85c8e06fc1ea21187a206985c4deab0e3f34723df663959f553a007c836368f700e60c81a8f1bfc715d940025ec0347a6a6fefaffdd02a390bfba7541f
diff --git a/sci-biology/coral/Manifest b/sci-biology/coral/Manifest
index afe45a7cb..668cea338 100644
--- a/sci-biology/coral/Manifest
+++ b/sci-biology/coral/Manifest
@@ -1 +1 @@
-DIST coral-1.4.tar.gz 34953 SHA256 a74be95ebe726117d5128ee1b4dc1a9e49af8a21958d4efc4b94b6f14cfe30ad SHA512 eefc34a233b73a9eb1bfc0ba3836c7e736787c9774ca9716c3230379d31d37f3e2b3a0dcbc9bf396583461519d45e4bf0ac12db6d386b22b8d1f365e84305a0d WHIRLPOOL b93c9e915297e25e4dfd35c8b8c93bb62a174c950ba83f6d84465ea734037de4eee25f7d8086d9e88273ffb9394d2ae5b2289b837c96546bcca4ffb6a60cfa48
+DIST coral-1.4.tar.gz 34953 BLAKE2B 30e7417de2be7db84b712cf7863a08833446a8aab5697578861490582d9860442c08a667e9a985a314a6d058722098374aa40a828bffe4b02bd7890e0daf534c SHA512 eefc34a233b73a9eb1bfc0ba3836c7e736787c9774ca9716c3230379d31d37f3e2b3a0dcbc9bf396583461519d45e4bf0ac12db6d386b22b8d1f365e84305a0d
diff --git a/sci-biology/cortex_var/Manifest b/sci-biology/cortex_var/Manifest
index af8ef8f9d..969e60d0a 100644
--- a/sci-biology/cortex_var/Manifest
+++ b/sci-biology/cortex_var/Manifest
@@ -1,2 +1,2 @@
-DIST CORTEX_release_v1.0.5.21.tgz 26902149 SHA256 cac63d5458890f85628542c1e19fe9a3c60066ba836855a13cafa15e394e14fa SHA512 92200cc1e886e519a8e54c9054a2901a03001091654a0534c7a92a5fa7a0ac43aba782b59731d588525902adf749cabca64cdb9cdb25c215be9afb01690215e3 WHIRLPOOL 2cdff42afa80c2a06cf3234ea046b9fb14f00f42707db0f300cece93e9b5e437b1ef8467511e342359cca7fd563260412b012f5fc5bc0f15ae1e5685eb0bb731
-DIST cortex_var_user_manual.pdf 265899 SHA256 b3cb4aa90efd0a817c9246ad9aaf7f7d1a17a900f593bf472dca26c5a8ce4801 SHA512 e4ff442f9280e9eee384c2b82c75493bdb90589b354333fc8b2bee8cf9c9baa432ec09dce5325b2e12c1e1930971616065713858565d56f9a361c573ac0c4f65 WHIRLPOOL 5353cf0f100a33c693904b97ae3381046a92522a7824c70bc2acfb5d24dbb51506b4ef8974fd38649fc1f45837f32f40108a596fb5bd832d609d7bed5c2160bc
+DIST CORTEX_release_v1.0.5.21.tgz 26902149 BLAKE2B 397d309fa941fd76ca51f58f20e036dd51548455ae2831738f03fed2293bb3f8dac7443282bba900b3f264a14e6bdacc23ff5460e713c05d4c5e5f11de021080 SHA512 92200cc1e886e519a8e54c9054a2901a03001091654a0534c7a92a5fa7a0ac43aba782b59731d588525902adf749cabca64cdb9cdb25c215be9afb01690215e3
+DIST cortex_var_user_manual.pdf 265899 BLAKE2B 83797183e88f0c17fe3a114c2912263bb84b4c2dca1a0a2a563c82fe377111d24a8ad726581f62b3e44a6cc714bcf58ffd8c18f9f5bd0eb9df6130bd49b296ee SHA512 e4ff442f9280e9eee384c2b82c75493bdb90589b354333fc8b2bee8cf9c9baa432ec09dce5325b2e12c1e1930971616065713858565d56f9a361c573ac0c4f65
diff --git a/sci-biology/cramtools/Manifest b/sci-biology/cramtools/Manifest
index 86bc4d8fa..7d81698d2 100644
--- a/sci-biology/cramtools/Manifest
+++ b/sci-biology/cramtools/Manifest
@@ -1 +1 @@
-DIST cramtools-3.0.tar.gz 7394093 SHA256 982138a33296d2dc047660149edeefeb24b92902bd8f5c0a38bc2d1692b0c28b SHA512 077806ece2e0449f2245e4aefd5ebf5ae91e01f177575a3fed9f7458f8d0ba0a554c368ec56ba305f58ed7f3502a7ac1da1685fb38a19e3230564f4329ecb080 WHIRLPOOL 84ee9c22f64190f6cb9f1cd1d2eb937d84672dd23c555397ee899d4cb0a97caf667dee5d3758ba227eeb10e4a009d0b39794406790979c84d571d76aa8cefb3e
+DIST cramtools-3.0.tar.gz 7394093 BLAKE2B dc0b21f94b1c3f256a55f4aa324106b6bfb3cd9548ce0aaf589c4da9f95fcbb0007a71c44ed6a915340d86c80555f91ebbf5864e38603f06a73aa132af23772e SHA512 077806ece2e0449f2245e4aefd5ebf5ae91e01f177575a3fed9f7458f8d0ba0a554c368ec56ba305f58ed7f3502a7ac1da1685fb38a19e3230564f4329ecb080
diff --git a/sci-biology/cross_genome/Manifest b/sci-biology/cross_genome/Manifest
index 503f4ca73..3b28aeb73 100644
--- a/sci-biology/cross_genome/Manifest
+++ b/sci-biology/cross_genome/Manifest
@@ -1 +1 @@
-DIST cross_genome-20140822.tar.gz 1109139 SHA256 54a1a1cad33d6220a87385ec87d8e670247c0cb3793267bd85bfa33d6472fa7b SHA512 31d8a7f3728aa727dfca6145e6a483c5b9eaa0e51f905d10b4465476c2ac51606d57326f260b6412b735384f0c2e903e2e204f6b6adf8e4b26af3dbc9f65484b WHIRLPOOL 4c2db17e5bc71bc32fa9456da8b4cc0cdab75cb31ff820e5b0f340c13a1963452d01a0f726ed73074fec1374ed9492cdffa788875041458801893c92326de339
+DIST cross_genome-20140822.tar.gz 1109139 BLAKE2B 1dc987623b49531df91d9c0ae2aa4c011b57751ac4c6fb9ae920594483b12e4a6c9ad7e6635391f2fb9a7afb70f47a37086f8f9725def61d2e081781eeaf6376 SHA512 31d8a7f3728aa727dfca6145e6a483c5b9eaa0e51f905d10b4465476c2ac51606d57326f260b6412b735384f0c2e903e2e204f6b6adf8e4b26af3dbc9f65484b
diff --git a/sci-biology/cutadapt/Manifest b/sci-biology/cutadapt/Manifest
index b2beaff1e..ed9f5f70f 100644
--- a/sci-biology/cutadapt/Manifest
+++ b/sci-biology/cutadapt/Manifest
@@ -1 +1 @@
-DIST cutadapt-1.9.1.tar.gz 595412 SHA256 a83d24455109be6426ee8de75d906d2b82cc9d59e2e86e0c2b465d3cacb94675 SHA512 9611f3f12e2c99bf03cca2e921e030cafd91782b40e1204e5dc44e4f8b910e2248ddec7e8d394b40460348e8f195ed4fcebc48c018320ce2c3daa1d1722f39c5 WHIRLPOOL 27b4d4724d96d8b2a56e3535ed7b1451afa2fd2f01a22cc09aa5f49b017a82849f94155e05424dae3a5a98a5f24f7dc28ad4ce86467e7adc1283fc3ca0aa5942
+DIST cutadapt-1.9.1.tar.gz 595412 BLAKE2B 379f8c35f1d91b232d76b359187f6f708a0bb6c026a85a678ab49ce13aba2a536b81a181385cfe6e61a5c6b5bac4f5fa73ff5439fff2493966761eb708f0d207 SHA512 9611f3f12e2c99bf03cca2e921e030cafd91782b40e1204e5dc44e4f8b910e2248ddec7e8d394b40460348e8f195ed4fcebc48c018320ce2c3daa1d1722f39c5
diff --git a/sci-biology/dawg/Manifest b/sci-biology/dawg/Manifest
index 0d79cf710..277fa1390 100644
--- a/sci-biology/dawg/Manifest
+++ b/sci-biology/dawg/Manifest
@@ -1 +1 @@
-DIST dawg-1.1.2-release.tar.gz 213666 SHA256 c8acc35874fae4285bafe1df79e5993e9702b762437cd706d484591d6a094a88 SHA512 e81ec3d3c2cac12ffc52f8af284c48a6741e8fe54fb9330da5aa760605c96ac286b36921032db068342d548a2f97d2d3bd5a4534d6b2431aa1571cf81aabb326 WHIRLPOOL 0cff0eb2e3b6b5468801edc5fef7105dda870e61f8f68add7f2a8bfaa95295423e8aa20bb62a7c9e52f01519c13a64afa1daf5534774e95151b2e5bbb8ef8c38
+DIST dawg-1.1.2-release.tar.gz 213666 BLAKE2B 3a2b9f0139a49b54285690fd718f4b3ffface6001ba5663f0ca53409741ee50ddedfbc420b852475ad6e99a9f596181b4171e22e74aac9ec6a54f9a889c1ff6f SHA512 e81ec3d3c2cac12ffc52f8af284c48a6741e8fe54fb9330da5aa760605c96ac286b36921032db068342d548a2f97d2d3bd5a4534d6b2431aa1571cf81aabb326
diff --git a/sci-biology/deeptools/Manifest b/sci-biology/deeptools/Manifest
index c0a50f45e..eee64af33 100644
--- a/sci-biology/deeptools/Manifest
+++ b/sci-biology/deeptools/Manifest
@@ -1 +1 @@
-DIST deeptools-2.5.0.tar.gz 59620916 SHA256 2636f96b0781a05149949bebcc3634810c030c7b83187456a275619908bf8787 SHA512 5bd10d4c58cdd7b3318028eb28f6ca9252d42899dee8eb8ad6af1b372ad26fbcc605b712c3369ec45350600f2c822a17679062b9f536f454e5bfb0381715f98f WHIRLPOOL 422bd2a3d9ca2b7f697ae127c487d472c672fcef955b761cb5b5783dbf56ed14c3d05c3f01360fe02aeef01f427ecf45370dc8f0eb1c9e93080ac9938e2cc88e
+DIST deeptools-2.5.0.tar.gz 59620916 BLAKE2B 83831449b71a72ce90b3d25fd6df6a73e5d786cf84e9e0420c888316867c1a1c8aaaddfc9d0682a459efc7bd9d0910f0a43aef488e8a86cfb9adb4cb0106e334 SHA512 5bd10d4c58cdd7b3318028eb28f6ca9252d42899dee8eb8ad6af1b372ad26fbcc605b712c3369ec45350600f2c822a17679062b9f536f454e5bfb0381715f98f
diff --git a/sci-biology/discrover/Manifest b/sci-biology/discrover/Manifest
index a8c14d997..a293b8424 100644
--- a/sci-biology/discrover/Manifest
+++ b/sci-biology/discrover/Manifest
@@ -1 +1 @@
-DIST discrover-1.6.0.tar.gz 251285 SHA256 1399eb8249a712d331c24eeb8ef30f7cc7cc737a6a9bd6682d34834a944c5065 SHA512 78215b8c05da214928934b63f78753d707fbbe5de8cf7dbd03ddededfaf8cedf232b6769755718748735ff504e129ce02bdef3b29d0ece2b57e3745ab2e1669b WHIRLPOOL f2716730dd9310194170f78177d73ab2c856769cf04c54fa1493515c26454a1af5df2f15fa246aeeeaf7fc7b966da6d6f30a8f4ca7beeaa2e1e9b44aca73d2ea
+DIST discrover-1.6.0.tar.gz 251285 BLAKE2B dfbcf92ef8d76b8da9c03cdf1d932fb2c67d1361813d918212352fe814cae46391fc3606da69819b28f822ad7f894290bc8c12cadfc135d10b78d1a49750f375 SHA512 78215b8c05da214928934b63f78753d707fbbe5de8cf7dbd03ddededfaf8cedf232b6769755718748735ff504e129ce02bdef3b29d0ece2b57e3745ab2e1669b
diff --git a/sci-biology/dna2pep/Manifest b/sci-biology/dna2pep/Manifest
index 898a160b2..9f8f4cf84 100644
--- a/sci-biology/dna2pep/Manifest
+++ b/sci-biology/dna2pep/Manifest
@@ -1 +1 @@
-DIST dna2pep-1.1.tgz 13340 SHA256 9df5a98c02f7b3c8a2cced4427235734f3b44b3e0d11bb236628d2b0a97e1aa1 SHA512 22016dafd190a9d72b8ba25fd42b96c2cf44f4aebba7b3c89ba86e543a4bffaca0e34581b79b31e4e0c48492911925e7740a0c60faf361fb52779c361c4f08db WHIRLPOOL 62223843b5c582bbd43a66cac5c449c2047f10c1ae307a5a4f5589887fea19f338493647e18c2d8d8fd03272e0659c5c5d5bd7e3f1216e455e0e1f057ea07479
+DIST dna2pep-1.1.tgz 13340 BLAKE2B 4a0096ac980b6950d7109bc469abae212953bbf9750b0eac97ef309493373d2ac25c231936b37a9dc2c8b23bad8be9d1fc800bc17437b943179c17eef41669dc SHA512 22016dafd190a9d72b8ba25fd42b96c2cf44f4aebba7b3c89ba86e543a4bffaca0e34581b79b31e4e0c48492911925e7740a0c60faf361fb52779c361c4f08db
diff --git a/sci-biology/ePCR/Manifest b/sci-biology/ePCR/Manifest
index 15ae9cb05..ff5ec5aa1 100644
--- a/sci-biology/ePCR/Manifest
+++ b/sci-biology/ePCR/Manifest
@@ -1 +1 @@
-DIST e-PCR-2.3.12-src.tar.gz 76391 SHA256 c53887b3b5e07bfb902f9717a737ed5a093402384b859724a525feb86111764f SHA512 d943b4f1f7173d517c09a98aa61649864b74362741192b52cbe9bbc40d12a7318bb9ce3753f99231cf953d8838c076378af187b4eb2404707669457709b5a412 WHIRLPOOL 756385f519a3a301e308e0cdf37ea83cc983ed736d28b9bb481b49242ccd12d31be7ce00e4680912cdd93637548b235eb5a8bb30a4b257079001be5f70c5864b
+DIST e-PCR-2.3.12-src.tar.gz 76391 BLAKE2B b35be1614b5be3903850405b9abbadb6582f878cd1d87c1fc27853db1e3dee431035a9a76bab5352f6e5e32de4ff1183f8e95f20f1605b4d057c2f374cfb65d4 SHA512 d943b4f1f7173d517c09a98aa61649864b74362741192b52cbe9bbc40d12a7318bb9ce3753f99231cf953d8838c076378af187b4eb2404707669457709b5a412
diff --git a/sci-biology/edena/Manifest b/sci-biology/edena/Manifest
index cbe128f7c..3860b2152 100644
--- a/sci-biology/edena/Manifest
+++ b/sci-biology/edena/Manifest
@@ -1 +1 @@
-DIST EdenaV3.131028.tar.gz 497784 SHA256 4037fce486c9725107b1690fbc67731713eef54e3fa53081865904c783533230 SHA512 853a5eb0afe507ba7b967075795593df147ad87c7d45be30eac6b24054ec365d7db39c9cd20bb414478a629c98c82bf0621c007c22a447949ee3f749907cae58 WHIRLPOOL 409bdb1e2f4f344198bff0af50e78afd75fffa10b4c252316a61f0c55e49bb4bdb514ed2414343056d31783e27d8ae800f7e33495cbc8f6c61ec57c5c5d974d8
+DIST EdenaV3.131028.tar.gz 497784 BLAKE2B 9fd318ded50d4f3181fa4e8509364f214fcbfad94631a243711baada1815b023bb5e59b5db351a082385d592629c324d2c7868371c06048bc87a3a66fe4db451 SHA512 853a5eb0afe507ba7b967075795593df147ad87c7d45be30eac6b24054ec365d7db39c9cd20bb414478a629c98c82bf0621c007c22a447949ee3f749907cae58
diff --git a/sci-biology/erpin/Manifest b/sci-biology/erpin/Manifest
index 0c7cd75e4..f6fdf3bcb 100644
--- a/sci-biology/erpin/Manifest
+++ b/sci-biology/erpin/Manifest
@@ -1,2 +1,2 @@
-DIST ErpinBatch.1.4.tar.gz 2195075 SHA256 5da4c69d88092e79f4f5d73e7d67dfccbb3d4a8cbe38c74169548ef608f25808 SHA512 1fe33a0760e843c1f2096e5fa923275d2109e10ba42ff18d24898d59de7d2e31ae2adee915d35d1afc1b1f41dee1243986878bc6440223a0def372fd0536c261 WHIRLPOOL 82871a1836d3cbe7a271e31ed15a2e2aca29a06262105bf1dd03a7bb64e6167a6dedd6bd56c4832c11579d3ca307706b7493d1b81e5cd2b63c166a74cb7577c2
-DIST erpin5.5b.serv.tar.gz 1145698 SHA256 0433ed25dd54491ddc4c025bb61d78d36797c2c83c61f260b5663c44cbad4d4d SHA512 f6ca25e72e26d98b609b54984bf74e4bdc0ff239e94e7f8851b303022b7399bcdf879589827e2c35763b8547487740832d51b9997a6a230d8f24b4c506d338e5 WHIRLPOOL 188ab1e408bec9a4d484b476aa73cce7acdc340f5c1cd5c31bdce8c511b0864abd0312feb815ae0d28b75de99c0225bb8d4765dd9d584295af37b998f9abfc53
+DIST ErpinBatch.1.4.tar.gz 2195075 BLAKE2B 70d226b1ac3ade4d3759bf9595703648f6d49bf191e7487b64836c86fa9925d6ac7da115e156f15f9d9cf9449092294bec4e455a782f218ea5c7522edbfa847d SHA512 1fe33a0760e843c1f2096e5fa923275d2109e10ba42ff18d24898d59de7d2e31ae2adee915d35d1afc1b1f41dee1243986878bc6440223a0def372fd0536c261
+DIST erpin5.5b.serv.tar.gz 1145698 BLAKE2B 9216668729691e8fdab16ad7972c6556216fe95e8f6e16100bd9a1ade47a9ed18bfb39546b1b3f6546b122106634a2071d3ea9634faa873f0bc9a98d504e7f19 SHA512 f6ca25e72e26d98b609b54984bf74e4bdc0ff239e94e7f8851b303022b7399bcdf879589827e2c35763b8547487740832d51b9997a6a230d8f24b4c506d338e5
diff --git a/sci-biology/est2assembly/Manifest b/sci-biology/est2assembly/Manifest
index 6d5091fcc..4c5a29069 100644
--- a/sci-biology/est2assembly/Manifest
+++ b/sci-biology/est2assembly/Manifest
@@ -1 +1 @@
-DIST est2assembly_1.08.tar.gz 5643052 SHA256 fc16fe362398502786a581c68e710933f91f7a03c7466d808b786f46f7c7d336 SHA512 f58fd56df45bb9bffeec7d58a3a7b0b6ada6e52807d53f0d9bf36ae6f5e2fba19b0387c62f9f3712582b0e164f1360d08ad199e69b52d44d94e8226c56a592ac WHIRLPOOL fc030b1af0f4dc845aadedb60c328d7aacfed5e5435d581cb43436ce9fa4fb2b7e731a0f725bb10ca7cdf0b5ff23ce22e29db6a29ae896df79c42f07a895947c
+DIST est2assembly_1.08.tar.gz 5643052 BLAKE2B f5e289955d70d8031f30eb13df3fe86376d5de2f907761e2cf3a4b25a7337040c3a1cbe219988001553f2a9b066132a876e7cc9cb08b255ef760d36aef78054b SHA512 f58fd56df45bb9bffeec7d58a3a7b0b6ada6e52807d53f0d9bf36ae6f5e2fba19b0387c62f9f3712582b0e164f1360d08ad199e69b52d44d94e8226c56a592ac
diff --git a/sci-biology/estscan/Manifest b/sci-biology/estscan/Manifest
index 3b62c9e56..79281bc74 100644
--- a/sci-biology/estscan/Manifest
+++ b/sci-biology/estscan/Manifest
@@ -1,9 +1,9 @@
-DIST At.smat.gz 32314 SHA256 7f41329858b19ea13809becf58c7262b48dd8070dc38894b8ad7c55adcdd4c2a SHA512 aeb3dec65b730570d70e8f49930bf85cc73fe39696d2ccc08e6a804cfe435ea43423f1f4a02b192c68da03727b628bb43ec0ba27bb4549e59f743eccd203df09 WHIRLPOOL 5771ae24c24fff6503ab38d2a3438c0f98918d0f936b90565ab330b259e7221f3c21c12a4888eff295b252a107e4a5bb23d9de42aca73602d5a20bff914376a4
-DIST BTLib-0.19.tar.gz 36283 SHA256 0acd6446031222b8fd5bd11eb3ec6c3164bc50491feef765c052689d9c3ee302 SHA512 00261daa7fab4d16dec9e9d4f9e382cc804a10c0ed6b813d6223902b53f6b260dc0a242acfab93897afa750e949ab3f21ecae537206d81eb712f06289387f7d2 WHIRLPOOL 89ac6c494968759fc38b4a2838fe59c1d29456cca8f09e643fba980548bfed9d1f221ddae2e476d95aa4818cb9f15180172f9c420cb1c521cfb58454a0ecc800
-DIST Dm.smat.gz 31711 SHA256 1f741836aa2b4ed96ab9ea6adb883eaa4d8d95610bd7a1ac484193ab30afca1d SHA512 fe141598291fd1bead1f0918c2e52533db1f5c5f60d4c71838a16298ccf60a8a1857a02379f58979dbab3cfad4e0ac64556cf629fcb65d9a0e6861fe4ca163a4 WHIRLPOOL 02babf79b6185a531a8515a6a4e8a48ab321e277efdd9f813f7b7cbb084b048047d3c2ce85f6c3881d48b42eb92ca820bf3ef288f132befe8e086b2e080c7434
-DIST Dr.smat.gz 8813 SHA256 7f3f2f77310be208efebd79d9fb861f815748cd5ce0ffd7889aa606e54a0794f SHA512 1880981db252ed08a762fdc8a321b27063ea2341cde56c40146cc7eeed0fdfa620e9b4c71c245fffee6521ae1efbc89b52e6558cd84aef89138e8b26b60460de WHIRLPOOL 78b4089deed83109fdf7df60600190ad1c0a3c46544c88df00c4c93f1d1179132e3f292d63c1d9a13c549151dd78339b40a31e7f613069673a92a37786aae4c0
-DIST Hs.smat.gz 62935 SHA256 53d34b4e0934c9e3baf3c2e221a4bdd6153314564fd20023d8aef9d454aa3c44 SHA512 7ac3af9b018992014643fbbd83abc4128df4c8b9c516fb1b6b16e1fdc65b23df07811fa5b23ecec5ef2993de71e3efaec5bee3fc1626bcf2984794f13e343447 WHIRLPOOL 2387f32e4c3fb99fcb8c1475f706b61006c54bb1262394b4b9b0134b76876379e32f34f45240931df65886633f0836667652387c126c207d280f270105a330d7
-DIST Mm.smat.gz 62711 SHA256 d04f3acd9ae6f8817dbfc9318ebee163e50669c1d2ccc6c048377054866c67da SHA512 4ee5fac326bee7e4fe17ad9eab608a90007485a90b479557a181eb49628ff5fee22d04a3ef360b6bc29a76709723faa0a9df8ef1cdb40421d772a0b2dc9f3fc5 WHIRLPOOL 143febf927cfa83265228f350e52cf55d0881421970c427a23d5bea31deeb6f169d58117766c992ea6bef73ec6846e5a919aa460342ba853ec935bc9dda34a46
-DIST Rn.smat.gz 32388 SHA256 2e0a9b3347a8d216a026f98e38243d207e683bc50ac5be35c4c24f5ee1803cb8 SHA512 e517d95aa4d1928f766ac9cc885f277d9f980d27265dcc7a2c5d747b1023a5606bccb2dbce2fa9ff76fc0f0333fadd3bc0b7abe9ea4aa82396b57bb06b8dcf43 WHIRLPOOL 7d14d1a6bedf7cb369e973194651ceb361870bdd56ba61cd3f791adff669e513abcfe5f3b0a0a32073093dad24b06e8c1b7ab2ea886d6ef9d563d8f4af80e902
-DIST estscan-3.0.3.tar.gz 46412 SHA256 037dc8770681ed12406a789ea292462a4ce5d89b0e906a1a3340aa4debc71e2f SHA512 d3ddb91a71a700a67807a63f7b9c9e2a1c45af847a7808afd757f60f276f7410e22adde6e0ffadbfef8e579890b79fe785b8a05e28cb3d67345464cd2035f69c WHIRLPOOL f359809648d5f4511b76134597bc4d748fca6747b3c8c55685a6458a396bfc5174cf443bf14408f7d8815399cfc12251bc1094c59805b26a9ef4bc6158068f52
-DIST user_guide_fev_07.pdf 327005 SHA256 416998f9fc282a53679fd56585b468ccebc4463e61ee5e989d9b426ed6f725fd SHA512 de1f046656c3e01a9b3e3930aadc7a91cb10d907a9d6af8fc1c2b0abe6ef0d1305baaeee463c80df0c700951a03b1c26a211fdd14e76fbf41ac5fca3467e49c1 WHIRLPOOL 75cbfe588857362f571956f8e1a2e78bf15aeb73676d50518249268ed6081d8ab02184e86f32fa036ae4514058cf7712b3b2eb4943daa8c6d4e6056b1ca7f49e
+DIST At.smat.gz 32314 BLAKE2B c48c043fa7e7e26e406a677587380e0ade911aafb5878988668da9b9f09a978a369e636c931d2d4d65b6efc65398723e1a78c032805cfc71f2927a42d87788c4 SHA512 aeb3dec65b730570d70e8f49930bf85cc73fe39696d2ccc08e6a804cfe435ea43423f1f4a02b192c68da03727b628bb43ec0ba27bb4549e59f743eccd203df09
+DIST BTLib-0.19.tar.gz 36283 BLAKE2B 53d26fdc7fee3325104a7f2041617bbde464421c540b29c7d47381c60d8f837601e7274d9f0ef5694d1b86b3e2cc7e9a0b289090c3c957a343542e3e7305cd50 SHA512 00261daa7fab4d16dec9e9d4f9e382cc804a10c0ed6b813d6223902b53f6b260dc0a242acfab93897afa750e949ab3f21ecae537206d81eb712f06289387f7d2
+DIST Dm.smat.gz 31711 BLAKE2B 5e8da0668d0788ce2e70535605cb85ced4ec052c4e736b11d838919c0328c6978170aed8e6102d62c6f8770a99a7f49aad373492ddc79328df3238486b7ee703 SHA512 fe141598291fd1bead1f0918c2e52533db1f5c5f60d4c71838a16298ccf60a8a1857a02379f58979dbab3cfad4e0ac64556cf629fcb65d9a0e6861fe4ca163a4
+DIST Dr.smat.gz 8813 BLAKE2B 465d980cc9c1d61f8a83e4c3dd203852b2cfa4bde5730de268655d7a05db9d018f6cff6357246bbfc42002f3993aebf44c9fc27c2d31fa6657194600e5a364b0 SHA512 1880981db252ed08a762fdc8a321b27063ea2341cde56c40146cc7eeed0fdfa620e9b4c71c245fffee6521ae1efbc89b52e6558cd84aef89138e8b26b60460de
+DIST Hs.smat.gz 62935 BLAKE2B 4089dbcc54af5544071d9fc270a9048c758fef15e4846f92dc9c61abd5c60ba9d8ba4a25b9064f4d418cbe1a8a277c5bba49af9a85f51dd9f3bcaac30a7b568d SHA512 7ac3af9b018992014643fbbd83abc4128df4c8b9c516fb1b6b16e1fdc65b23df07811fa5b23ecec5ef2993de71e3efaec5bee3fc1626bcf2984794f13e343447
+DIST Mm.smat.gz 62711 BLAKE2B c65aeb6f8833e4effb360de29e3c25985184e4a9822272f370fc292ec2142843b78ac66485ec98b017aac3a18b7936fc45b510f58cb2db909d5230291573bdf3 SHA512 4ee5fac326bee7e4fe17ad9eab608a90007485a90b479557a181eb49628ff5fee22d04a3ef360b6bc29a76709723faa0a9df8ef1cdb40421d772a0b2dc9f3fc5
+DIST Rn.smat.gz 32388 BLAKE2B 06144cce26cd35eeb15d94db5f169a9cf6c6ab02b4c4f213e42140b2fe864473e7c107c910092620f255384eadd1e07a366e58a21d3df570e63e2843e537aaa3 SHA512 e517d95aa4d1928f766ac9cc885f277d9f980d27265dcc7a2c5d747b1023a5606bccb2dbce2fa9ff76fc0f0333fadd3bc0b7abe9ea4aa82396b57bb06b8dcf43
+DIST estscan-3.0.3.tar.gz 46412 BLAKE2B 998f4f117503e044492495d52e5b064fcb62c3800adb4ec4b357042ea90d8c6ce86902257e5b28ee119c2b332044389c8775101bad6875cba069db6961f73931 SHA512 d3ddb91a71a700a67807a63f7b9c9e2a1c45af847a7808afd757f60f276f7410e22adde6e0ffadbfef8e579890b79fe785b8a05e28cb3d67345464cd2035f69c
+DIST user_guide_fev_07.pdf 327005 BLAKE2B 5d66466c122c12618c5aadb2f12a404159b553b57e80fa421d707d8c3e70d795da7285a6976beacd67b7c6462297fde7843b89b48ed773752cdc0e00bfd1c36c SHA512 de1f046656c3e01a9b3e3930aadc7a91cb10d907a9d6af8fc1c2b0abe6ef0d1305baaeee463c80df0c700951a03b1c26a211fdd14e76fbf41ac5fca3467e49c1
diff --git a/sci-biology/eugene/Manifest b/sci-biology/eugene/Manifest
index 598c64283..da51818cd 100644
--- a/sci-biology/eugene/Manifest
+++ b/sci-biology/eugene/Manifest
@@ -1 +1 @@
-DIST eugene-4.1d.tar.gz 7473965 SHA256 c160e6b4206e6700c866f38fee2c8fd0d69972d51ebc5b4cb7680774a419f4c0 SHA512 dab37930e211b3783954f6e4a762450760201b77e0b4214f16724516d9be583d0a7ec44a2f510e73f4370e9c2dc67a425456a057fdba8f51cb72386e16a26ef5 WHIRLPOOL 7ab116acd48648673d2cc633bae26908bf8250c5a17b9d5e8719dfd56edcdf716406b80af26a99700d9ec81e625737c57fe16493f670245f21999fef1c6911eb
+DIST eugene-4.1d.tar.gz 7473965 BLAKE2B 537ba871b701a5c199791809f76ea883ff77fe768e27a69b95186ef82ab32cab9b5761405a9fadfeea9f58fe88cadce83bba4b1fa6cba5f4ede2347a516d1df0 SHA512 dab37930e211b3783954f6e4a762450760201b77e0b4214f16724516d9be583d0a7ec44a2f510e73f4370e9c2dc67a425456a057fdba8f51cb72386e16a26ef5
diff --git a/sci-biology/eval/Manifest b/sci-biology/eval/Manifest
index 1700cc7ae..f8c424235 100644
--- a/sci-biology/eval/Manifest
+++ b/sci-biology/eval/Manifest
@@ -1,2 +1,2 @@
-DIST eval-2.2.8.tar.gz 592357 SHA256 5cce1df4a08ab5fa5d81e572c876ed2bd02041f5ac3cea73d3f7eee87c7c1d9c SHA512 ec9f72fa8cc1bb22544bf07964261fe0078cdfe204b0e6b262a648cb078fe31521286f106d7cb22f30ff7280c332d4a349b8689b361384f19342739795f8e76b WHIRLPOOL 9b69dc4915f6adecae071db315fda8115b5dda1981eaf3a1c999a5807ba907afdca0bb77e7d495522f60a680fd6955503f15cff7a082fbc84677103fb662f3d1
-DIST eval-documentation.pdf 548237 SHA256 c353e617ef6607a0850dea6c0022e39dd357797bad1f84aa3c9bcd494e627939 SHA512 b97ca2519b04e9f1222125d13593518cdf7a22c7660ca42ca8a539378526a82c409a3cb066a53ddd93c4501dd7c33242a868ee0fc184978df807bbd743475d2b WHIRLPOOL 5c867e738a857f200163f4c7364d621c26736411da2c8ee9e947124313ffa19c4c86562173ce1c0335d4a0f1ed837c53a800c2d2bcf86406284630183289f27b
+DIST eval-2.2.8.tar.gz 592357 BLAKE2B 1163122ac297505a9fd2dee081e899d419d7449380abc77f9ed0b47609d05184114dc7b4105f6af73537d0a70ec5e5efdb0c496f192f177b71ef209332c5e86b SHA512 ec9f72fa8cc1bb22544bf07964261fe0078cdfe204b0e6b262a648cb078fe31521286f106d7cb22f30ff7280c332d4a349b8689b361384f19342739795f8e76b
+DIST eval-documentation.pdf 548237 BLAKE2B 2332dfb9453c0c705d88804f48a724ab7009684633e9bf619596f17eee0254a41342162c82476c1bbe448083e3aa339f0e31f21ee60bbba90bc7a70ffc56f428 SHA512 b97ca2519b04e9f1222125d13593518cdf7a22c7660ca42ca8a539378526a82c409a3cb066a53ddd93c4501dd7c33242a868ee0fc184978df807bbd743475d2b
diff --git a/sci-biology/fastdnaml/Manifest b/sci-biology/fastdnaml/Manifest
index 6fa84d2d7..e1ca557c3 100644
--- a/sci-biology/fastdnaml/Manifest
+++ b/sci-biology/fastdnaml/Manifest
@@ -1,2 +1,2 @@
-DIST fastdnaml_1.2.2-10.debian.tar.gz 7357 SHA256 7ac7262dc6de1e9cc0f39500e885cb424fc782aa6b1b297c4d4a90d9c889052d SHA512 e3345cc4aec43d4f6cf1f4bb3f13ef0d6b2c2bb79305c53ef15a258643697abe3404e03de22b748076352f540f3c5fb288b044561d5bf0e5dd7563f3b0316f79 WHIRLPOOL eadb2b1117e32e65c1b651ceeab4d49b774e346dde6d6232fbcea3003d369b0a3d30a46c6c731150ea4ae4744bce7c382203d05587bcfb65b6c0db0726b92ad2
-DIST fastdnaml_1.2.2.orig.tar.gz 70005 SHA256 34690ec9a8e2fe1d86bea4a7cb10f7bc47e5e4c30719e1c9451210df4f160180 SHA512 46727f0e6e10bc33a8fc22b2e5297ed1d23a225c88a478bcbe6aa69dd6aab2351142ce8b0e5c1bf500712157e2021d15136edec3519993cdcb8cacd4d4eabadc WHIRLPOOL 4975e22771c770e264a02c9546cb940419e510c5aa1e4110b960c6eb87c3a88004be4d5c4cb6540f4c46dbcde1d9fdb303621b36a7324f335f9eb5017bc01c19
+DIST fastdnaml_1.2.2-10.debian.tar.gz 7357 BLAKE2B 37f011f18f2cc41183262b798cf42c598eb5f9a8e5fe5c5ec069975e007ee464d67451a0661800dd2ae3533514838ef0429eda2d39827dec05c6db0fdebb36c5 SHA512 e3345cc4aec43d4f6cf1f4bb3f13ef0d6b2c2bb79305c53ef15a258643697abe3404e03de22b748076352f540f3c5fb288b044561d5bf0e5dd7563f3b0316f79
+DIST fastdnaml_1.2.2.orig.tar.gz 70005 BLAKE2B 40a936801f9b7bcf5ef03c68ce36e47ba6bab0db7cbddf0e303afe908906c41db81177524a299afaa4e534adb56036eb5de17c867c1845ee16cbb53481a5e879 SHA512 46727f0e6e10bc33a8fc22b2e5297ed1d23a225c88a478bcbe6aa69dd6aab2351142ce8b0e5c1bf500712157e2021d15136edec3519993cdcb8cacd4d4eabadc
diff --git a/sci-biology/fastqc/Manifest b/sci-biology/fastqc/Manifest
index 4e8207292..470141cc1 100644
--- a/sci-biology/fastqc/Manifest
+++ b/sci-biology/fastqc/Manifest
@@ -1 +1 @@
-DIST fastqc_v0.11.3_source.zip 10073593 SHA256 b62b1aea957af9051b30d306183df239b095eac4f8d281478c372b25c61fe44d SHA512 bab27d6997ad6525b7804ba9a3a54eec1cdb835d548c2840ae882334902d12eea4bbff549370669176ade76633a5f1d7dc6f7ee865a25f1a41b525764660b471 WHIRLPOOL 843039e115aa0101e687ad9fe9b40d4e658e96f6dbebe87a9f4074c1f3ea46910f3dac1a3426ec329a194a542580ca16ce5d22c348500453ba357c27f15a7f06
+DIST fastqc_v0.11.3_source.zip 10073593 BLAKE2B 4b72d8c06c7495baa138a39f4f6140022c9d8a954dd284c3e66fdf547411315425995e72005eb6605559197b094ead9aab28918bf0f89b3a1d49fef00b02ce28 SHA512 bab27d6997ad6525b7804ba9a3a54eec1cdb835d548c2840ae882334902d12eea4bbff549370669176ade76633a5f1d7dc6f7ee865a25f1a41b525764660b471
diff --git a/sci-biology/fastx_toolkit/Manifest b/sci-biology/fastx_toolkit/Manifest
index 9ade08ac9..abb3cfa08 100644
--- a/sci-biology/fastx_toolkit/Manifest
+++ b/sci-biology/fastx_toolkit/Manifest
@@ -1 +1 @@
-DIST fastx_toolkit-0.0.14.tar.bz2 543018 SHA256 9e1f00c4c9f286be59ac0e07ddb7504f3b6433c93c5c7941d6e3208306ff5806 SHA512 e1df1486e853b3ecee71e677cd6e86246a3993174016111eb84910625dc7ec11d37aff75de7ccefad1e019e75fe72050d6529add2116b759d5056b8096286c05 WHIRLPOOL 2bf36a527037f5d514b0f3e5b0c2c10a2587603d92cb3f953bb2eb9b801da6f999fc3dcdad60700e4c0393b05ce55427e90efe2e6d20af0b2f49db5dc6aaf867
+DIST fastx_toolkit-0.0.14.tar.bz2 543018 BLAKE2B d61456252ada507efd4cc45ff2f0d54f7a6c55b185d41eb5f5accd7e73184b8b80b2c415b38f8e4ccd687ae715191785a89e64f790fe598ba477901c12d514a1 SHA512 e1df1486e853b3ecee71e677cd6e86246a3993174016111eb84910625dc7ec11d37aff75de7ccefad1e019e75fe72050d6529add2116b759d5056b8096286c05
diff --git a/sci-biology/ffindex/Manifest b/sci-biology/ffindex/Manifest
index df9217049..28a5ef5d2 100644
--- a/sci-biology/ffindex/Manifest
+++ b/sci-biology/ffindex/Manifest
@@ -1 +1 @@
-DIST ffindex-0.9.9.6.tar.gz 34833 SHA256 5d49575dda35f33c0f9226e2ecf84aa4838dfd3df27e448c50683123450f846c SHA512 b7bbb0c560603922c03ecf6f4a112b246a1d09eb250846423e69ad7d4f15d538f050eaba879d69ad937ef02644aa96b475df93b861216ba5b189ea1fd5c57caf WHIRLPOOL 8133e6b259e979fbd6779ad37b1c3c7f758d4c2c79a43e3d815d816a260f26869e2af38a76ecf9904d79354c333ca3f21d0f14737ed1749923254cad5e6c05a8
+DIST ffindex-0.9.9.6.tar.gz 34833 BLAKE2B 356999066a5c702a67af55862e2318858e4693cc455460844f277633ec2e03127723ffc0d91274d3639a434214ac5b630ba08f4f27df70eed4015ec65e6884a7 SHA512 b7bbb0c560603922c03ecf6f4a112b246a1d09eb250846423e69ad7d4f15d538f050eaba879d69ad937ef02644aa96b475df93b861216ba5b189ea1fd5c57caf
diff --git a/sci-biology/fgap-bin/Manifest b/sci-biology/fgap-bin/Manifest
index c798ff8d2..0e259aae3 100644
--- a/sci-biology/fgap-bin/Manifest
+++ b/sci-biology/fgap-bin/Manifest
@@ -1 +1 @@
-DIST FGAP_1_8_1_LINUX64b.tar.gz 19403911 SHA256 12d824390efddeff5c92c7ea1b191303e46dd9f6b34f2c858a747aaf00f986ef SHA512 fc8d626d158ef362b5aa5d8ef5ffb8840b1496ecb2f4714441d74bc3fca5eacac3eab1e6d93e4344b175eece2b8228d98794493c7d5d300fbb30a8a3b6b8afd0 WHIRLPOOL a44f769771a3d7966ec4633718821281b1715fb63cfd96d5749e655d124d32350376aea88c64fb80cfa8649f30479c48588e9e76eb4334c83069081bfdb40412
+DIST FGAP_1_8_1_LINUX64b.tar.gz 19403911 BLAKE2B 673558a57851542cc961083bc01ae2e95456222fd26c7db767a278c9170b2dbb521fb8167c15a864946c0a453615d566c3ff7c2d05619d60a8d3e17c3f0a8c78 SHA512 fc8d626d158ef362b5aa5d8ef5ffb8840b1496ecb2f4714441d74bc3fca5eacac3eab1e6d93e4344b175eece2b8228d98794493c7d5d300fbb30a8a3b6b8afd0
diff --git a/sci-biology/flexbar/Manifest b/sci-biology/flexbar/Manifest
index 9711db441..92c682f14 100644
--- a/sci-biology/flexbar/Manifest
+++ b/sci-biology/flexbar/Manifest
@@ -1,2 +1,2 @@
-DIST flexbar-2.7.0.tar.gz 30033 SHA256 8b44a16594e8a2f68d33acbcfdbfb0a017d2a6dc69cc65259b199ad94ea0f0e6 SHA512 38dc40476dadd769977dd2428941928e839e107e719e9b595c2ba57e1d8764fb394c5960b809da99dc939a66cae9350ea607e393b9467e98d464d0e49bcdac47 WHIRLPOOL da45d9bb8080ef7913324875dd0f8ac4a6f182337da1c217eaf9894ced407f78ff10637b62981466ad0cc2c4dde25d6d1d5235480112ebe67e7a21053b699247
-DIST flexbar-3.0.0.tar.gz 31292 SHA256 60226d62d9617a7026bdae4b6f5f695ac2bc839b7d19e1d7d9ab63f85aa31a74 SHA512 ccefb4d1342ce5353a64510f79f8b15c409eb68853eb98ed7c9b23cb53d926e5b6965b1a9d3d8a5b3699da2f18cf8a627d5ca3ed172e25693a80d878547d6d38 WHIRLPOOL fa341bad342e87edd697049b84ee368a895bef2ccc445b2d730d70a720ea3ce0c5170a3d9b793760c9a6e3762c451b971f8e28a4ba006335d6c4354d83cead3a
+DIST flexbar-2.7.0.tar.gz 30033 BLAKE2B e8c8f8e9f2e44870c844b59d40cd7c6d4da599e1d59d5b5201e3b6e3dbc2d088680253e43c5c72b57a7a33401b0a2b4770c34700e415af6be4b250c6dda0806f SHA512 38dc40476dadd769977dd2428941928e839e107e719e9b595c2ba57e1d8764fb394c5960b809da99dc939a66cae9350ea607e393b9467e98d464d0e49bcdac47
+DIST flexbar-3.0.0.tar.gz 31292 BLAKE2B 43abf3cc9d58423f1a26d52d673fd08450b149de85af49aa35036abd2906e2648d844a83b5578be57a83b5636ae70d934c48891d64596260828ea638338e8bc0 SHA512 ccefb4d1342ce5353a64510f79f8b15c409eb68853eb98ed7c9b23cb53d926e5b6965b1a9d3d8a5b3699da2f18cf8a627d5ca3ed172e25693a80d878547d6d38
diff --git a/sci-biology/fsa/Manifest b/sci-biology/fsa/Manifest
index af0012b4a..1a6d61cd5 100644
--- a/sci-biology/fsa/Manifest
+++ b/sci-biology/fsa/Manifest
@@ -1 +1 @@
-DIST fsa-1.15.9.tar.gz 10113092 SHA256 6ee6e238e168ccba0d51648ba64d518cdf68fa875061e0d954edfb2500b50b30 SHA512 c8d94608f927a5f198556924c642299dfe3abc1a9e5ec51705c81947efcea2d1b6ec4cfb1e9800ce8bcbf314cf2c1f9230f4deed14c3b9b7e8d45734b2ac3770 WHIRLPOOL 648a7f67e72caa5e5f89d343c4b3f727b31328b0589e7414fe36a8075759c93249eacc69efbce3f48906659debfc82e20e54611ab1e9feb589a1ef0265cc7f83
+DIST fsa-1.15.9.tar.gz 10113092 BLAKE2B 1f2d438eae033bb136cb3f9a6bd96c97f484631050d1b510945cbd6ff8500260699aad01513a61b295d065173db8535706ff5aeca4137d31e24684276229d919 SHA512 c8d94608f927a5f198556924c642299dfe3abc1a9e5ec51705c81947efcea2d1b6ec4cfb1e9800ce8bcbf314cf2c1f9230f4deed14c3b9b7e8d45734b2ac3770
diff --git a/sci-biology/fsl/Manifest b/sci-biology/fsl/Manifest
index c54ea85b0..09d736ed3 100644
--- a/sci-biology/fsl/Manifest
+++ b/sci-biology/fsl/Manifest
@@ -1,2 +1,2 @@
-DIST fsl-5.0.8-sources.tar.gz 1420879532 SHA256 2053cc42782360b191bd9610dbbc0a56677b40796cceb4680420b93d5eddfc15 SHA512 8dedf13d633d71fa28c5dd6591fab4adda4893b76467affa6f58aee917ee3fdc83da07d8f505feb61ac2733de1bfb84f7f9ff74589756946be21cdb9f057f0f0 WHIRLPOOL 2a64245f6b4da2642237aad96270b65799f868bb7a5294f1576470173a9393296b4c26e0ddfffe2198665d068c82f6d7b64548729cfa3aff07f6809c13d57554
-DIST fsl-5.0.9-sources.tar.gz 1491426239 SHA256 4b58183ab11abcf4ff61283af5cc0b792f7a0de2ccbdbb2e2562d1522e0a81d9 SHA512 86a33084cf880ea1341ff8622eb13a364a462018a0fac55ee291dd8917e8453701db57f35529e144d419ea744397906b586b88acaf9a2dea0291fa3101ebb27d WHIRLPOOL a8f839e384cf3928eea003a07df1dfeae36999bc9439a327e1d93e2bbec124eaaef920960e928ac935194b1647d2bfa76711c7dba25eac4bc394428b268011d7
+DIST fsl-5.0.8-sources.tar.gz 1420879532 BLAKE2B fab46d286b9c083f31408e885235a72a195f14a1e863264e8cbff2b6cfb8c70ef335cafe58dff38141b1d027aef301e94212da4c9b6d3f4306ba60c81e19cec7 SHA512 8dedf13d633d71fa28c5dd6591fab4adda4893b76467affa6f58aee917ee3fdc83da07d8f505feb61ac2733de1bfb84f7f9ff74589756946be21cdb9f057f0f0
+DIST fsl-5.0.9-sources.tar.gz 1491426239 BLAKE2B 310c4eb131856120f803d67f18e4d4e97df1ff22143bffa45be5f8abe31a01ce3df5a64abf5d065670b95394249a2f569a66a9cc22cd004b03e868e823d4555d SHA512 86a33084cf880ea1341ff8622eb13a364a462018a0fac55ee291dd8917e8453701db57f35529e144d419ea744397906b586b88acaf9a2dea0291fa3101ebb27d
diff --git a/sci-biology/full_lengther_next/Manifest b/sci-biology/full_lengther_next/Manifest
index b054058b4..fc5927852 100644
--- a/sci-biology/full_lengther_next/Manifest
+++ b/sci-biology/full_lengther_next/Manifest
@@ -1 +1 @@
-DIST full_lengther_next-0.6.2.gem 2039296 SHA256 28f7700e8c2ada7ccd5034290d6dd4f1e69c3751949bdad1b18996deb606dcda SHA512 19b2608137cb8129da08cbd064d2667290f8d0693f8471dcb3a7ab194de1d02b940b58c16abda8cfba5bf9e803b948f8da21c3a82c5e1b73c30346cbeb12191f WHIRLPOOL 94b7ebe3a3da752e1822fefb99d011e6d247f2d04ba2fb505c192a950f0d4f46bdefa0c81f3231627b6a4297bf16606b714c44f12e519be01c6d5486eba02074
+DIST full_lengther_next-0.6.2.gem 2039296 BLAKE2B f81a420f404d94b772b3140caca80d737c3d5fea0d58642dfd997b3d0525da74558133e86451232184a5319fb022c6eba6039850a400770798f46ce52c26a800 SHA512 19b2608137cb8129da08cbd064d2667290f8d0693f8471dcb3a7ab194de1d02b940b58c16abda8cfba5bf9e803b948f8da21c3a82c5e1b73c30346cbeb12191f
diff --git a/sci-biology/gap2caf/Manifest b/sci-biology/gap2caf/Manifest
index 7d17476c0..48d2d68d2 100644
--- a/sci-biology/gap2caf/Manifest
+++ b/sci-biology/gap2caf/Manifest
@@ -1,2 +1,2 @@
-DIST gap2caf-2.1.0.tar.gz 92905 SHA256 1fd237cf1e83c3c4c3b67d2d35c9f059cc7eda9f6ac7886fab994e2386283b9a SHA512 2a843d861b7be6d656793f4876953596b91a93c3da7d23ee8edc10c4620e33fc96a16beaeaaf4f66c1f5c5084eb8a9a255d4fa8e1ca6e87e96372f2459167c90 WHIRLPOOL f5a3360de7c6b8741e5e85a9bc25198de4dbcbebdee73ba48a7e1460eb4d778648a5c93f0bb44c10e15a4fa46dd0c741fc10c8e33ae8c50e2c7cd9914a56aa81
-DIST staden-2.0.0b8.tar.gz 4312143 SHA256 c13aa0c22dcac6b10d13501dcb630efad51d7c171968e0bb30113667b49cfa9d SHA512 ddd273d281557595c90b93304cd03205adbe1367845ef43763a8c75d06c2729d99ca8622439ff5c31217595481a9ac4ccedf87c5948821aeaeb73c96133dc411 WHIRLPOOL f086f7f81884091a34c9933a2bb901146eefcd2dc4cb4b940228de3a51daee4c1f9d5613ca34ec345bcce48fc53bed6c4a408f5b5d6e87ac5c4deda222daee24
+DIST gap2caf-2.1.0.tar.gz 92905 BLAKE2B 3d02b94a33047c00a42923204f6748e3903fe1609cc5ce6b31faee152882c665c8edba02e8d6b233e266efa1e994a0be6e2b8bf5078c0428f98343329cc02e51 SHA512 2a843d861b7be6d656793f4876953596b91a93c3da7d23ee8edc10c4620e33fc96a16beaeaaf4f66c1f5c5084eb8a9a255d4fa8e1ca6e87e96372f2459167c90
+DIST staden-2.0.0b8.tar.gz 4312143 BLAKE2B 318dffff9f40daae0d5c5de23f710bbf43440e0854bd15b5b0af07afc48bfac166dd95a91a2b27fccd19468b087f68bf6028a636147904090dfe6076335e6c74 SHA512 ddd273d281557595c90b93304cd03205adbe1367845ef43763a8c75d06c2729d99ca8622439ff5c31217595481a9ac4ccedf87c5948821aeaeb73c96133dc411
diff --git a/sci-biology/gbench/Manifest b/sci-biology/gbench/Manifest
index 07e55f9dd..01b1ed908 100644
--- a/sci-biology/gbench/Manifest
+++ b/sci-biology/gbench/Manifest
@@ -1 +1 @@
-DIST gbench-src-2.11.7.tgz 72878160 SHA256 aafda0e10178bd8977310ee2d25721d5bb55b61f936fcbdd555830ecec577e78 SHA512 f8a7cae5325f4078c8ecb94bcabf498b9857ee80c2af57b7981b2dbe55ebdfac05f71156630f42790b164eef388a7641470b4bd71a0ad4a16c82629ba8bd0745 WHIRLPOOL 59d76b582a014b31776e6766d9bbb4e707d8b0771378f0932ac3374e9eea2e3d344b81ce44546f4e801a33dbe0e5ac02116164f9b49d7889734ed0b0d8102895
+DIST gbench-src-2.11.7.tgz 72878160 BLAKE2B a9e2a6b11fbdaa149bdea7e36fe9e3799e81a1722c79f564cfb743d54f7af14b1a83cb1f792a3417958a7458e060fa1b7c4ef806c26b3c37b12ef2648ce1d960 SHA512 f8a7cae5325f4078c8ecb94bcabf498b9857ee80c2af57b7981b2dbe55ebdfac05f71156630f42790b164eef388a7641470b4bd71a0ad4a16c82629ba8bd0745
diff --git a/sci-biology/geneid/Manifest b/sci-biology/geneid/Manifest
index b394d2cce..7ccc65fbc 100644
--- a/sci-biology/geneid/Manifest
+++ b/sci-biology/geneid/Manifest
@@ -1 +1 @@
-DIST geneid_v1.4.4.Jan_13_2011.tar.gz 2722565 SHA256 8c172eb783a7c2c11a0508bafd60cd63e6698a3961db1478a231acb65d855a2d SHA512 d44297da1dfe426640a90ac94f41d439b8d7a9a192c9368a8c43cc232e8a7044a16ec16b632f67a0a8010a86ea1b23da106f1ae3dc1d40243abb929bb33024a7 WHIRLPOOL b83b64765206a387cd9f0dd3b320be9b884982b2ad22aa11c90334f0eca6f857cb8e23f0fa967ba790f2bd3bdabe5d121b4e0b5b562558157925cff0dc44421f
+DIST geneid_v1.4.4.Jan_13_2011.tar.gz 2722565 BLAKE2B f81530271eb4258b3a4841f81d541cd01fdf49132733e32ea9f2b1c187571ab9be7588927981b354379883fae04f24564e3d2f6078b3447ce983931001117b87 SHA512 d44297da1dfe426640a90ac94f41d439b8d7a9a192c9368a8c43cc232e8a7044a16ec16b632f67a0a8010a86ea1b23da106f1ae3dc1d40243abb929bb33024a7
diff --git a/sci-biology/genepop/Manifest b/sci-biology/genepop/Manifest
index 4891decec..f90467d00 100644
--- a/sci-biology/genepop/Manifest
+++ b/sci-biology/genepop/Manifest
@@ -1,3 +1,3 @@
-DIST genepop-4.2.1.tar.gz 136675 SHA256 08d82c6236814573086627305b47e201ec6abc6ce1a15fcebac9671f24f57f91 SHA512 f658f6ab82c1ef21bf15a9bd03335ea792e670ce7cf8f2eb3e1c4d75ae24ff099bde5580b310fdcd552dfb1dbb6df55352a8c06fedeeb7d46434a58767233882 WHIRLPOOL 20ac7ad1e9ff710e4ff420cdf67ba479019a020f5da9ac5f961a5937e7532c6e069f909e48074cd738d4d857a6c84331aca8972eb5cd3567c649c218b386cdb1
+DIST genepop-4.2.1.tar.gz 136675 BLAKE2B 9ffc4e24bda4c739762c4790145c099455c65700ac51f6f8890fa57ac71a99f0f87e5b4d432cd5aa4d27ec73b2738605f5522309fc69e49b383310730de5d4ff SHA512 f658f6ab82c1ef21bf15a9bd03335ea792e670ce7cf8f2eb3e1c4d75ae24ff099bde5580b310fdcd552dfb1dbb6df55352a8c06fedeeb7d46434a58767233882
DIST genepop-4.6.tar.gz 1872683 SHA256 1b6cbb4c133ea2bfb0bee728bad01e25bdd7e8574d21401d09fd93f34298ff14 SHA512 813040f43c3d0c1b41f4689c005f00e7593cb1c201182b202343b3dcafa63f141086e98b140056e0916d3383cb17166694e42277152436831139c1aa02532349 WHIRLPOOL a47312cb52dc8a28af46940f24acf55f5a3bbdd28d5b19f82ec28835e02cd39ee4e921fd88b8d6788331d43ec0a7472d189cda02209e4c3d86545e491d78df24
DIST genepop.pdf 578521 SHA256 8d7477d182dc91b6b35a46831752ad90d06681572e272935b3d26ffb44a09db1 SHA512 48d1b951c3ab9896827c9f8dca2dbeb447db5a9af1559cb7c2bac2cf27c0c36e7b27268678258a81aacc925ac1346d9ed1b63b25b8517a9acc55177438ee885e WHIRLPOOL 6b422bf8b568261ff09e779c367e3b4fc33bf9a1f8f73cdb58a7482255afd0d380f4ddace24288213377fa5da0af7f1240a06c3c9035915ccc274a5a3bf3afd3
diff --git a/sci-biology/generecon/Manifest b/sci-biology/generecon/Manifest
index 74b79cef9..10f7613c1 100644
--- a/sci-biology/generecon/Manifest
+++ b/sci-biology/generecon/Manifest
@@ -1 +1 @@
-DIST generecon-1.2.1.tar.gz 239507 SHA256 2a6230891ca4d42408a98afdd820da56c26c225625fed03d5a9b4c0b6c1cbb48 SHA512 59a3a7a54ce1086c8c4424aa8a2661e39c72b1896c2ac3af6147f8234ef8cfd4db9af69b709131e5ea63463fe4d8ab93109cd73cda8b59d2dc061a674af7bd4d WHIRLPOOL b112f81178d058def434d3650bc5ab3424f67a8890170736db0f2c7c971a8b9745ac214b8b814b5df3e970116a539555579af8083399527ebde83be38158e68c
+DIST generecon-1.2.1.tar.gz 239507 BLAKE2B b5eeaf94c8488e32b60180875c6baf6fb7b12792678f331a65166db758866ada87f97155fb35a3a011de387f93c6e08fc38951d4e7c73046f05395bc2b4770bb SHA512 59a3a7a54ce1086c8c4424aa8a2661e39c72b1896c2ac3af6147f8234ef8cfd4db9af69b709131e5ea63463fe4d8ab93109cd73cda8b59d2dc061a674af7bd4d
diff --git a/sci-biology/genometools/Manifest b/sci-biology/genometools/Manifest
index e940f024a..6549d8165 100644
--- a/sci-biology/genometools/Manifest
+++ b/sci-biology/genometools/Manifest
@@ -1 +1 @@
-DIST genometools-1.5.7.tar.gz 12929462 SHA256 b84a2eab9e7b8fb3e7acb5a1b9df40e8d07394d18357b4bb85c5a9004f3339e5 SHA512 1b84b0118a3befce520c57140f0b8a1920c5cc638180e06f8881d466c58fd74ba0a72e432efada0119b4f82d55a3f87b4feb3bf280b8c968e5178f2433eaca87 WHIRLPOOL 3b52bea380930c26b12c3ef76bed0677f6cb1bdbea56bcaa2f7d6087c05708c15364d82a382fa6f625e9d55474f4a98bc4a2f05706d6a7555a9d55dc9b703af0
+DIST genometools-1.5.7.tar.gz 12929462 BLAKE2B 84811c71769e60dd7e8bc83ccf574be95ebc01e7fe3162224d8cdf2a438d34ed1ef82c6fffbc71f157be254d42f415a25cd7091e51d27a15a3b08e990def9c7d SHA512 1b84b0118a3befce520c57140f0b8a1920c5cc638180e06f8881d466c58fd74ba0a72e432efada0119b4f82d55a3f87b4feb3bf280b8c968e5178f2433eaca87
diff --git a/sci-biology/genomeview-bin/Manifest b/sci-biology/genomeview-bin/Manifest
index f28b30018..1b58ac202 100644
--- a/sci-biology/genomeview-bin/Manifest
+++ b/sci-biology/genomeview-bin/Manifest
@@ -1 +1 @@
-DIST genomeview-2450.zip 7651469 SHA256 84c5ae8b5826f7ced956892755757e83dbbc4b0a621c3d1ed92f836d1182e5d9 SHA512 bd5385f96f84130f43b43ddc67b91f04abc88a5358115fdfad1e89fcac1c86ab213b383ac7c3892df0b97250be6cf7e491fb179543eb0224ac73af375a686ca2 WHIRLPOOL ceb8b9dfaa78318ea453d4c468883f5025a28a3eeeb38822b4a1c078debe511007287f9fabff1e9ae545226e03648eeeff34d88e835d4178f91754061d212b56
+DIST genomeview-2450.zip 7651469 BLAKE2B 41ff5d7cd463584b5edbcc0f1310f11110bdd02dad3048dd25d202849f86f1947fa1410b95fd464bb7829c94f6e06a91d4fd2ef96e7248258fba79f2373345e3 SHA512 bd5385f96f84130f43b43ddc67b91f04abc88a5358115fdfad1e89fcac1c86ab213b383ac7c3892df0b97250be6cf7e491fb179543eb0224ac73af375a686ca2
diff --git a/sci-biology/germline/Manifest b/sci-biology/germline/Manifest
index b5ca88189..0ed52ba5e 100644
--- a/sci-biology/germline/Manifest
+++ b/sci-biology/germline/Manifest
@@ -1,2 +1,2 @@
-DIST germline-1-5-1.tar.gz 853549 SHA256 a30b64686a5b3300a7334c98fc09508fd5987c76ab91e149f7c4907d138a7a08 SHA512 d274106a332016f11abaa6aaedf5ca46743647b9074a55e593a3779b965a9cce0607edb06f79e0b380ea81fb0a7112b3fe7518a45c96586dbf4172ed8e820f3e WHIRLPOOL 282352653418eca3f477e629a7eb096d05154ee2b37a642f3ff4858881ff31ffaad82ba77fb14b575774419846863d8fe6e1350d398c70601d6745be534bf552
+DIST germline-1-5-1.tar.gz 853549 BLAKE2B ecbad3acdedf897da412e3c3bed016fb3118972d5a6d2e5fd2bbc62cf83ed7227cc68609b879b6896f76fe8348a2ccccaa5f9f21276fd321f653006b410c3cad SHA512 d274106a332016f11abaa6aaedf5ca46743647b9074a55e593a3779b965a9cce0607edb06f79e0b380ea81fb0a7112b3fe7518a45c96586dbf4172ed8e820f3e
DIST germline-1-5-2.tar.gz 854243 SHA256 24cd5dca659639d7a64feb2f1d96f38ba261c703f3a711d9154f5ad554d81821 SHA512 a30fd07beda057288a0651f764a92971b8cbf2d802aba7b8216ad3931a9330631e8007dcb74b4be1ac21b3460ba4e67cf08afe7a6689f3fe90f57577c7bf8c0e WHIRLPOOL 051547329162922831ba562a8e0ce443e389346cab604ae3199be57ab0107d0b6db27f3aa1e01a8593625bb39c5411dbc2260f82daf72b94f196f4c65acb2e0f
diff --git a/sci-biology/gfftools/Manifest b/sci-biology/gfftools/Manifest
index 6b0030795..2a3ab712a 100644
--- a/sci-biology/gfftools/Manifest
+++ b/sci-biology/gfftools/Manifest
@@ -1,2 +1,2 @@
-DIST MANUAL_GFF2PS_v0.96.ps.gz 139407 SHA256 eac552a4acc18a9c91d02233921ba0128d7a123c421909e02ab7be2bf716cb56 SHA512 3f11586b481b90f874898f5f18e6220a2cf7e6a9917455a3b5d6db3601e52604e139e5abdf2c7e9e14a87ae79cd47b81b7e46b42805a017b8586b280777b84bb WHIRLPOOL c45ad22c51c9df0732f039209dbcf3c0e41820526087a11dfe32810888846d4b0c0784a0d87b5aeb1cce10afd21ae6aca120da1eb8e88f40373735136392872b
-DIST gff2ps_v0.98d.gz 45329 SHA256 7d250141b79403fa2f632ae62273352edb6b2f73fd7db3c7fc9510404dc4fdab SHA512 a1c219ac14afb94c6da331179e306197805b2930e5291b20509ea1a979c4c645af8aade4a030f2ce364cba561e90fb5161bfb3ac3259503dc07937ce924033d4 WHIRLPOOL a65e70e45f9dc35237d0d10314b85f7cc18bdad8316232efc4b54187412da828bf4c58afc1c7ac296fbfac0d34e4afc4020df08da8cef7b77cb5a6cf0fc8e915
+DIST MANUAL_GFF2PS_v0.96.ps.gz 139407 BLAKE2B 0d0ddb96b56ef767392041cd52d08f74423ea74f89dc9ce09bc28cce1a4d8fb51835444bb9baec9f71f62b4f91ede4bbd73c6b86a335fce7220e76b130dddfe8 SHA512 3f11586b481b90f874898f5f18e6220a2cf7e6a9917455a3b5d6db3601e52604e139e5abdf2c7e9e14a87ae79cd47b81b7e46b42805a017b8586b280777b84bb
+DIST gff2ps_v0.98d.gz 45329 BLAKE2B 6219c9920dd91bec38169d0eed3cb28b5f769accb29593cafea3f7c88a2ed7be2f3eb9291c03c749ec19aa03e2c213905c0d0c03f5a37306c3018c8b41371cc6 SHA512 a1c219ac14afb94c6da331179e306197805b2930e5291b20509ea1a979c4c645af8aade4a030f2ce364cba561e90fb5161bfb3ac3259503dc07937ce924033d4
diff --git a/sci-biology/gffutils/Manifest b/sci-biology/gffutils/Manifest
index 95503621b..dbac0ec54 100644
--- a/sci-biology/gffutils/Manifest
+++ b/sci-biology/gffutils/Manifest
@@ -1 +1 @@
-DIST gffutils-0.8.7.1.tar.gz 1541112 SHA256 35d5c96f62fdaa120ebc0c3668901324ca5bcf866eb7cdd96f0599a7b7d41d2f SHA512 4739dd402963d402f34a5e3da9cca7ba9586dcbbe62efbad89bf85c5dbb0feff0e260eea20563340911756e6817289c1556c261ef973a61f4e66e50efdfc8aa8 WHIRLPOOL 657a17ac395d1427ca8af1fff5b6811d43bfe2f4b5d1ab860d932c9531b840587e82b28bf2f66f3f078127c5ea633fab2112b6233fa38d161f09df56965ed9e4
+DIST gffutils-0.8.7.1.tar.gz 1541112 BLAKE2B 65676cf0b910ad0fee478315409dba808a13d11922d0ab254694939ebd01f10b62c2237ae517d941999c6cf9bcb08d903bde8b9055bcf7a67116e14439ec4cca SHA512 4739dd402963d402f34a5e3da9cca7ba9586dcbbe62efbad89bf85c5dbb0feff0e260eea20563340911756e6817289c1556c261ef973a61f4e66e50efdfc8aa8
diff --git a/sci-biology/glean/Manifest b/sci-biology/glean/Manifest
index ac6b8de91..6be62439d 100644
--- a/sci-biology/glean/Manifest
+++ b/sci-biology/glean/Manifest
@@ -1 +1 @@
-DIST glean-1-0-1.tar.gz 77941 SHA256 461079d5e44f97e745db5f66ed453a1d74701081c84bc5fba942bc436d337e5f SHA512 614aadc127caca2603913088d8b43702f564db9ef489a8ecedbc90d11e819b4a4753658638dfc115da3bb5c0bde155e57c7b36728129bf93f525fc94e4cf1d58 WHIRLPOOL 99d8c413f558ac524e087e457dd32be797e4766a96886adf421dc8bf2d036091209ddba8fe7b33d30e05a375a04983c8d2816e8e046606332c0e809f4fdd3a45
+DIST glean-1-0-1.tar.gz 77941 BLAKE2B a7f00172655d3f5ab371125b92d81640fddcabf38057d9c57262bfe993cf522ca1f7b1aa3675a8b81bd3ba08fbffb730c9da4b7cf381119a28d5a5cc50cd5d5f SHA512 614aadc127caca2603913088d8b43702f564db9ef489a8ecedbc90d11e819b4a4753658638dfc115da3bb5c0bde155e57c7b36728129bf93f525fc94e4cf1d58
diff --git a/sci-biology/gmap/Manifest b/sci-biology/gmap/Manifest
index d7c9c0c27..cf02625ae 100644
--- a/sci-biology/gmap/Manifest
+++ b/sci-biology/gmap/Manifest
@@ -1 +1 @@
-DIST gmap-gsnap-2016-11-07.tar.gz 4541657 SHA256 5b79c81bd7478af5ff95adebfe3c564e2930557befaa74b703e0169ecfa1ebee SHA512 3affb06417d654fb050b94006d123e3be9635b4e65a48346dd988a86b7db9d536853c6656b075f6fc06fbc8dd08692e662134b984d2f58b2f06504441d266f49 WHIRLPOOL 6a6ac3207d97e998f62ba831ccbcd1778e1028d7f8225069231dae519544943dd81df3db58865ac8f96027caba073295d2350b8937453a4c462f5858fcf5504f
+DIST gmap-gsnap-2016-11-07.tar.gz 4541657 BLAKE2B f322aa78302dc7849b7ad3b51f2a76e1034f79d04648cd4a7bc9f8fab869d34243315a41164f2bb2ab63404fb3de6fd8b1bfe4de2e8b8239d2c4f25cdef3bc72 SHA512 3affb06417d654fb050b94006d123e3be9635b4e65a48346dd988a86b7db9d536853c6656b075f6fc06fbc8dd08692e662134b984d2f58b2f06504441d266f49
diff --git a/sci-biology/grappa/Manifest b/sci-biology/grappa/Manifest
index 05397aa3d..e157d2bf2 100644
--- a/sci-biology/grappa/Manifest
+++ b/sci-biology/grappa/Manifest
@@ -1 +1 @@
-DIST GRAPPA20.tar.gz 172261 SHA256 19b3c5ab21c845eaf4fcf56fcf09a15db84597d8438155bb463d8f3e1bb51103 SHA512 61662b87942ad0866b2a043e9a3d53a89c3f8cd0370d5aa3723cecb9976d330a238b82d573dadef921419277db386d8ecfe0e01f4db40f3ffa11cb435da74600 WHIRLPOOL 94e80c6931f158f16a7f2a2d1228acdfd82d415071861b1a57cb7319fbcff6c6ab263b4c20d46f870dcf53e038f434b007ebbe1a8c9bbe80f3b55820726e65e8
+DIST GRAPPA20.tar.gz 172261 BLAKE2B d925f408317e0401e91e5d1dfa832e015c291362264f96ada18eed0a959845b53c62d1cd30f83a4cb2f0efebbff3b8aace8cf86f1bcb038adc1c1682816b19ef SHA512 61662b87942ad0866b2a043e9a3d53a89c3f8cd0370d5aa3723cecb9976d330a238b82d573dadef921419277db386d8ecfe0e01f4db40f3ffa11cb435da74600
diff --git a/sci-biology/hexamer/Manifest b/sci-biology/hexamer/Manifest
index 778aad15b..6c7ebb87b 100644
--- a/sci-biology/hexamer/Manifest
+++ b/sci-biology/hexamer/Manifest
@@ -1 +1 @@
-DIST hexamer-19990330.tar.gz 142855 SHA256 bf4cbea551b7338c822d52e0887780085af29382ffac78618916e3e17357c337 SHA512 d5c53a43d00a16e346798129d671a12da3e1d4e0ca64d9dd6aed96e909707d5f2812a86a4df9a7621beea65573f24c8b74c94d81c17c91ba9afd3376d85b398b WHIRLPOOL 7de34b7c52c722feff692e248fb85eb61a08d2747b61c70c2e65f35e09765c95106a87c7f5aee8a8128ff28e94376b26b0b81ed01e61072beda2f6482570633b
+DIST hexamer-19990330.tar.gz 142855 BLAKE2B 0882b50228bad5f0f4058be045944b70e9214d23397142b79c3fe5788b12e6196b2a7af0c61035638eb10bfd5f77ea20628d39625f368c756a72628865f07ff1 SHA512 d5c53a43d00a16e346798129d671a12da3e1d4e0ca64d9dd6aed96e909707d5f2812a86a4df9a7621beea65573f24c8b74c94d81c17c91ba9afd3376d85b398b
diff --git a/sci-biology/hisat2/Manifest b/sci-biology/hisat2/Manifest
index c9e85a34c..70929dffa 100644
--- a/sci-biology/hisat2/Manifest
+++ b/sci-biology/hisat2/Manifest
@@ -1 +1 @@
-DIST hisat2-2.0.5-source.zip 3914703 SHA256 ef74e2ab828aff8fd8a6320feacc8ddb030b58ecbc81c095609acb3851b6dc53 SHA512 a626ebf8bb2682bdd69ffde55d1f53c6926ef6172a2d852aadc7fb02c08ab7b1b25158e046a6e07acb4f406549c37a329e5354402eaa5e93612568c7c58b2559 WHIRLPOOL 9735c7d8cd29913ee3c058a58141ec8926c065e4691803865d281acf5964d3c4930479e94be231d8860e69708b755f58bf86af40a6513c8edced6e42e476c806
+DIST hisat2-2.0.5-source.zip 3914703 BLAKE2B 3da01db5ea2acef3d9c8afd14f8efc93ee6c71f68d97b06e4a20e5ab72a7d39babf8dba9e74488aa3fc8a7062a0554b356d555703d49496de71248027ff76a6c SHA512 a626ebf8bb2682bdd69ffde55d1f53c6926ef6172a2d852aadc7fb02c08ab7b1b25158e046a6e07acb4f406549c37a329e5354402eaa5e93612568c7c58b2559
diff --git a/sci-biology/hydra-sv/Manifest b/sci-biology/hydra-sv/Manifest
index f4fe204fb..9278708af 100644
--- a/sci-biology/hydra-sv/Manifest
+++ b/sci-biology/hydra-sv/Manifest
@@ -1 +1 @@
-DIST Hydra.v0.5.3.tar.gz 228772 SHA256 0d03168f1ab6cec69108730c5747d310ff54023294bba67de77a9d3eebdcfacd SHA512 9d3421d97d58a4fab1631ab799d5be3c693f5664c96172e5e1ab14f200eb07e2ee07745afa87b77f566e99fd5148718b7a960d6ed6ce3611b600b4c21011f36f WHIRLPOOL 0ddfd77f43be3ffe687fdef05556439298e1bbed31d17a1b3f09b01b9f17323982fb470d9a138cb9953f0989eec8105a85a7366c14654d94322f279a956fc0ad
+DIST Hydra.v0.5.3.tar.gz 228772 BLAKE2B ea95810cf384a42d13df635fb1bc3c3bd8d606a78bf8e640dacf0db262b9c6ee84bf2d4b3357f3f5ff3bf0a0152dfb02bb520256076f73abb0f36f99c0f76075 SHA512 9d3421d97d58a4fab1631ab799d5be3c693f5664c96172e5e1ab14f200eb07e2ee07745afa87b77f566e99fd5148718b7a960d6ed6ce3611b600b4c21011f36f
diff --git a/sci-biology/idba/Manifest b/sci-biology/idba/Manifest
index 7b86f0bda..b2840dd9b 100644
--- a/sci-biology/idba/Manifest
+++ b/sci-biology/idba/Manifest
@@ -1 +1 @@
-DIST idba-1.1.1.tar.gz 209382 SHA256 f7484c728c0b196ede2ff7931a2ce11da9f9059147e0b33f73bbe99452128b53 SHA512 4657c67809152c07dbdbfcf572532f4e88fb1dc8180e777eabd8ebda626bfeb7a318894eb9ce46dea6673bdf9e7ab1a5e99dc0d4c33c736d67152394e4d1521f WHIRLPOOL fd89ef9b1204c8d502bcb1827caabc9a3e2019b4555a4dc1ddc3e04ebc88f22d4fab9dd59d1942c8d1e2bd79f0f88add1b9a7ddd4a17777837656bd467ff5171
+DIST idba-1.1.1.tar.gz 209382 BLAKE2B d87835418340500e2e9ff43c0335d813b537e64e3f2ade9b7661ab04ca2dbcd3d0a2ebfbe8856b672eb654d0911da37444e26df8d7173a6ca9d8bbeafccc82ab SHA512 4657c67809152c07dbdbfcf572532f4e88fb1dc8180e777eabd8ebda626bfeb7a318894eb9ce46dea6673bdf9e7ab1a5e99dc0d4c33c736d67152394e4d1521f
diff --git a/sci-biology/igv/Manifest b/sci-biology/igv/Manifest
index 291b2f00f..87f80e6ac 100644
--- a/sci-biology/igv/Manifest
+++ b/sci-biology/igv/Manifest
@@ -1,4 +1,4 @@
DIST igv-2.3.47.zip 146891756 SHA256 1a9e0f56c1dfde2bdcd3823ad196ac4e4deb983500152667e761560c34d9b91d SHA512 24eea8215db8eaa92d4562f5867d3d5cf4cdde5f0e65cd2dae63493c02a47fa27bd30765c7ce87ef4d5106dfb92106f3abca2471d077311bc1bb6de2a71d2d2c WHIRLPOOL 0dd2b6a542832d9f769ca47c7e969fd8cc7b7fdbebd57d63b4e3e8c9e80a175840255c2a7a8496415117ee58a65fa4a7f7aebfec18168223ac0232d7bd428e89
-DIST igv-2.3.81.zip 148743869 SHA256 c0c079fac0df8cd357a6564aec3dbcde98b6fb46e7c22e3eac1a51a08f4bfaba SHA512 5f6fb29ac73ff87deb7987a535666bb7cd1c3c40144cd92185d2e81403cddee2aa66cbfa1e43bf4a4167f1884c42ab670598dfd1a5e680690953dc5831143bb7 WHIRLPOOL 96d3ed000af28740a2176083869c342690a9f6e77abcd61c338cc53ff98c5d9cc478822e0d6cb5d9bcefcaddd463f76d5334b24b3445256befd11d082e6aecee
-DIST igv-2.3.88.zip 150339120 SHA256 8cd669224ab0ab38f2ecceb9487805305bee78d45b04857a2da682a9bd221e4e SHA512 f647f7c115dfbd24303744319ab7d4ab7e25624d82a664fb1aa9df2840a1246a833919d79747b793db466380c1e6091079992d7702295029b6abce924ce6782b WHIRLPOOL c1cb29c4d94cc83f5a3d2109de1960f47fd607aa44ad54cccb9836dd9d9783e260c7cff7a8f331ac05a11bda1d9eae8d9a05befacfacbf44954ba2bacc360ccb
-DIST igv-2.3.92.zip 150354074 SHA256 46ba23804e14914f73b446c719934183214bcf53601298ed0aedd833d2148f4e SHA512 a10b7ec75bcb044929fcaf1ace9088436691a131af332f1dcf9a9ebb6349a78b06800cbeb2c1fc290a9db6308cde623f44a928d7c0a75a2d55e153bcad056a4a WHIRLPOOL 1139871646504c4246d4be7bf7e8ba551e17bfe91e099223060af5338371331a303b2e2fb78a4145a5ed3963438257ad4b5ad0f8233dbbb31dd8acaa1738c62b
+DIST igv-2.3.81.zip 148743869 BLAKE2B 2828e543675b6fdded7079979783e8eed1ad8f224964e0eff2b6c33d90f7a9e370c2a9781d7be772486b3d647badf069dc721904f791eca05c5b2b15a524a341 SHA512 5f6fb29ac73ff87deb7987a535666bb7cd1c3c40144cd92185d2e81403cddee2aa66cbfa1e43bf4a4167f1884c42ab670598dfd1a5e680690953dc5831143bb7
+DIST igv-2.3.88.zip 150339120 BLAKE2B 217d85f83d19de34184b64cd2971d27fd227a6533ed825cb255f97211ec64937f9e4447491c54bb9b97e48f6c7ef932c7c1a7809750ff061fef4f6476e9f0bcd SHA512 f647f7c115dfbd24303744319ab7d4ab7e25624d82a664fb1aa9df2840a1246a833919d79747b793db466380c1e6091079992d7702295029b6abce924ce6782b
+DIST igv-2.3.92.zip 150354074 BLAKE2B 0d6e6658efe768ac1a407c69c92a04e76dc7f1020e36a3c533ab4a80a7a4c4bbe25d64f4180a9b424f571a45e784d5974793ccfcd76457dd1bfad36fc5eeaef7 SHA512 a10b7ec75bcb044929fcaf1ace9088436691a131af332f1dcf9a9ebb6349a78b06800cbeb2c1fc290a9db6308cde623f44a928d7c0a75a2d55e153bcad056a4a
diff --git a/sci-biology/imagej/Manifest b/sci-biology/imagej/Manifest
index 472f38d81..60773ac92 100644
--- a/sci-biology/imagej/Manifest
+++ b/sci-biology/imagej/Manifest
@@ -1,3 +1,3 @@
-DIST ImageJ.png 13012 SHA256 02b93e7614a2ab52ca5dbdc941dc99b4b461c91b28203d33e877746f97e12b86 SHA512 60c2ff73bcfc668931c59b0dfb299723a369b741601bdd591a407302e30fc58c6c626525b3f08b955a5dab37729d3f704db689317b42a94e7a3ccbfb72abc9b3 WHIRLPOOL c8f5328abd55b3ec23f0676d29bd47f91059f22de3ed6ad98c95670e504ffa3403bd91ee75d601b68034dd686d252163680b5fd57aaea8bb8b7b6d275ac9964f
+DIST ImageJ.png 13012 BLAKE2B b42ee855e6214b275cbdcc722f6c7b095fe83de477a151714c4afec8e23abe12b2d0bf62ae81a4f9c4ccefc9245a9e144085b844ee3f92121a88f7d27106acf5 SHA512 60c2ff73bcfc668931c59b0dfb299723a369b741601bdd591a407302e30fc58c6c626525b3f08b955a5dab37729d3f704db689317b42a94e7a3ccbfb72abc9b3
DIST ij150.zip 4179316 SHA256 97aba6fc5eb908f5160243aebcdc4965726693cb1353d9c0d71b8f5dd832cb7b SHA512 a6aae1813c9144692d7e11a82199cfc1d52e5f99d5716de890b58456c303eadc047a01e37822cdbd0c610bae944954d9e2ae46c8961710c63311f649976930e9 WHIRLPOOL 6df690327c54a5809b4e0b3f4e7c52998265de2685b4fb901702e12cb52936a685eed3f9db9610b4ed6c2e778b87ae8e73cb09d770955aac4d87f0327a3e4fa3
-DIST ij151k-src.zip 1580015 SHA256 186adf6756bb1008b1d9596ffb7e92efcaeca7411b19489368aa9e135751c0e1 SHA512 93249fb1c186e757dde78231d3064a1179f5c10d94dc02b9b0535febd5db78cb2666e9e952380de8847339c840d4e46e857eaa982340c6e5084d1003c44791e6 WHIRLPOOL f72fd0d4d3377247d21d9c46a1b5ac5e8068ebbceac790aba89a7ce35ee0f2ca00eed588f2bc924d1180c4774c6d6ce81cfc8765a2d610a9b913c05689ccaae4
+DIST ij151k-src.zip 1580015 BLAKE2B 143fca57d38457f8264f59517890b9541ebc2838f56ccc07fdc0fec114bdc02042dc74a0c9560e7ed47e8d5e3c91f83dd725c860f823f4956c55636c30025bfc SHA512 93249fb1c186e757dde78231d3064a1179f5c10d94dc02b9b0535febd5db78cb2666e9e952380de8847339c840d4e46e857eaa982340c6e5084d1003c44791e6
diff --git a/sci-biology/jannovar-bin/Manifest b/sci-biology/jannovar-bin/Manifest
index 119902071..784120abf 100644
--- a/sci-biology/jannovar-bin/Manifest
+++ b/sci-biology/jannovar-bin/Manifest
@@ -1,6 +1,6 @@
-DIST jannovar-cli-0.17.jar 8540135 SHA256 0702baa5209345e2a733f99784e4307688b971005c5cc694c16ebe33d74c9af5 SHA512 bef201e98176269b2b0069e08aae8c6cdb687d8e0342a53a08b5c00c28d0afbe5c3230dbf57deaea6b0f332d81b7639a5f25a9f25722b756a951d9699fdd9bf9 WHIRLPOOL 53c9675457483653f96bb4daaf40125b7973d1285eee65af1fef118935d23a7af742e5bee7b1277529882f1bfd3575e34ae6235d20034f4f9136038d79aaf458
-DIST jannovar-core-0.17.jar 284035 SHA256 2a0349ba4038f7a44a47e46abc7966d6fb0afd4f5be36f23674ad6d6f5f12a0b SHA512 78eff3bd16abc3053546b7a14c00b597f17c3b58c2c17e11be033b22b2452c2e3ad0de56cc76387321c00db6cda70219f627022905bdd81354bb45baca5d3c02 WHIRLPOOL aa28e513a24ce4421846b6e1dac1978c7758a5960e266694103a155304b70abe27271008b2b112e0450ca7823dcc3299f9e557d2f92b5b67c2cfc1b66d71c8cf
-DIST jannovar-hgvs-0.17.jar 198023 SHA256 c1aa705cfaf7dbef2050791dc41a4170e96a5814cf06cbe767eac39b45ecc853 SHA512 2cd750dccae52bcd6a255feacd26729ff001e7561a3f49eb99f68012f5e0d4948450def8e22e189e3364a509ee7899189a3ba7c94fb9f784d94bea06277a3616 WHIRLPOOL e7919330dd66159c765fd177dc595db55045d9025927755a798bcac3ad63eb10500ddc29dbca894fceb4bb05abe2ca18f8444813568bd5b93f1304514166188b
-DIST jannovar-htsjdk-0.17.jar 66149 SHA256 d40acac1ae4fd64fff7faececf9c37d6e3f8680943aa6e657b52ca0d850a4bc8 SHA512 0605fd7bd53607ba79427a9f7c9e0d30789b6e6d33528bb9d3aa35b876503c8524751c58e38fa3f5d97c2b9b95521d6057eb20ea4fc3c9b378f9df82aa419082 WHIRLPOOL cfc1658a24f3251f81c4573e26d59f1eb0798291d0078524229505e3eae738d7bd3491ba16ed7c440b4bb937075be6b8be168992dc9b2fdf6231d3f3a617a719
-DIST jannovar-inheritance-checker-0.17.jar 34815 SHA256 e22d1c9137d83803fd58895716a7725a953c36dcc0a53f17132adde1f256d41d SHA512 777397ff2d0d4d8327eb4a120f3f8fdba6b371c574e6c7c65186c4c7717c6d6a2f41e6246ad3ce741f3022d0a8daaa407dac75988b0c53ea5fa26e2a08c389bf WHIRLPOOL 4e95d5f0167fc2a7014ccc4cb4ae41886279239bc09653032596c857714e006ee6d022359f016a4d0fc37e9fca52b4b083ce670896697da644632571af32b1a3
-DIST jannovar-vardbs-0.17.jar 73655 SHA256 c382aee579c2c16f43178993b6259624970d647d75c64d170a63ab42e29d6a93 SHA512 f6d837d9f6fa6ac1b71fe478d76b877fc394fecd95f050704d9d42fddf02b5c059d70351611af6788c4380fd125c46703a4573111671a48b53ff16d31e8ed15d WHIRLPOOL f0843b3a6b5e334f719bc45f7da62c2e5ef5e3c6ef7dd41cb93daed63157f42fc6fa8a4d6ed5fb79307295b6e969db628c2ada94d622c8f233b12ca8d30d5d9e
+DIST jannovar-cli-0.17.jar 8540135 BLAKE2B 1f286e61ae85e3d097a47043687d042c7a66f2e3a9617bb11a872bedd3388fab2a379381478da9fc1e28824ce9c64070da7db59ccd1a2c833de9d9ce9b37fb79 SHA512 bef201e98176269b2b0069e08aae8c6cdb687d8e0342a53a08b5c00c28d0afbe5c3230dbf57deaea6b0f332d81b7639a5f25a9f25722b756a951d9699fdd9bf9
+DIST jannovar-core-0.17.jar 284035 BLAKE2B 82e334b0e76f20dc8fbd2890206b0839187a52af1c805ebde6a1c229a4e989f8d8fc2ded0b53a8833149608b1f7bd0af9fb6723817170e35a4527dbe133a395f SHA512 78eff3bd16abc3053546b7a14c00b597f17c3b58c2c17e11be033b22b2452c2e3ad0de56cc76387321c00db6cda70219f627022905bdd81354bb45baca5d3c02
+DIST jannovar-hgvs-0.17.jar 198023 BLAKE2B 283719aec622f7bc2f8fca98c1bbe85ccfa986b04e27cde604d147c2e4d71d2aa4e8f407822cdc4b5afb972c4a3d278e144cd50ba2650e80155a8a5f1b47bc61 SHA512 2cd750dccae52bcd6a255feacd26729ff001e7561a3f49eb99f68012f5e0d4948450def8e22e189e3364a509ee7899189a3ba7c94fb9f784d94bea06277a3616
+DIST jannovar-htsjdk-0.17.jar 66149 BLAKE2B 7bd91c8f544d4071556ead47f513cc7abbe09ac3f36935b945ae912301e9af6be8e259510a26e60505d5fa2f2c9ac3bab39f6e7b812e564d81fa183aff8e8e2f SHA512 0605fd7bd53607ba79427a9f7c9e0d30789b6e6d33528bb9d3aa35b876503c8524751c58e38fa3f5d97c2b9b95521d6057eb20ea4fc3c9b378f9df82aa419082
+DIST jannovar-inheritance-checker-0.17.jar 34815 BLAKE2B 367aece2ed477e9f9d47d7e0f1c9930069141f12d05344336b61fcf0bfb4cb80f62c9ecb4f696c1c81676ea5b0e8e0214d1a9e20cf102763ecd23a8a6eef9efe SHA512 777397ff2d0d4d8327eb4a120f3f8fdba6b371c574e6c7c65186c4c7717c6d6a2f41e6246ad3ce741f3022d0a8daaa407dac75988b0c53ea5fa26e2a08c389bf
+DIST jannovar-vardbs-0.17.jar 73655 BLAKE2B d9b7ce562902c688e04252d5e3b4e029f181b338908f2c67347d2e40f7374097c7f92d6e2303c610f82c43c54fd6734126f4a9d591dd17d3b2c66cc2d3bbe087 SHA512 f6d837d9f6fa6ac1b71fe478d76b877fc394fecd95f050704d9d42fddf02b5c059d70351611af6788c4380fd125c46703a4573111671a48b53ff16d31e8ed15d
diff --git a/sci-biology/jellyfish/Manifest b/sci-biology/jellyfish/Manifest
index ef84f925b..a6669d2ee 100644
--- a/sci-biology/jellyfish/Manifest
+++ b/sci-biology/jellyfish/Manifest
@@ -1,6 +1,6 @@
-DIST JellyfishUserGuide.pdf 142367 SHA256 6f4365f1839b0370fff50fcd25ffcf2dad4192c2ff5b8540fd929d73a8cf85c3 SHA512 a9d65be7591d4b9b275b9f76ab79806d31bf7ef36b297b67b1802a302687aa8d49d4c491c3bb9201aec58268bcfc8c703940c72991b9080bbd1bde95bbda5b8a WHIRLPOOL 1c57b1596ccfff2159bb86359f9dafac1f994b33ab38dc334827d74b8c7541728c6c8b400df54d756bfa0b98ae023fae020ccbebbb24e3eb51baccac5024a6e6
-DIST jellyfish-1.1.11.tar.gz 1067138 SHA256 496645d96b08ba35db1f856d857a159798c73cbc1eccb852ef1b253d1678c8e2 SHA512 aea7373e5ffb9deba7e164425bd7d4219d9be1e48ca666ff41e70bbc77026bc581273fb5a07c47894e2b31dd1339d4f1bc1a7b0501f10a482353ecde082eed1a WHIRLPOOL d2f31e39c1d4ce4fab78abd33c62c79bf950fdfab4f5283713e67deab8e1dabc3fd1c6cf09de964a6707793426abca24c05afe0dcf5365e04ae97dda15da2040
-DIST jellyfish-2.1.3.tar.gz 955773 SHA256 00530abd01c1253646f29fa4554e96fd31148ed92402940e6f357bd5cab38e9b SHA512 2b6fea6c2686de7b568988543d5a9466676eb17252ecce3243b0dc7e3c833aed02ae6570749df58c2921289db0167b39848ccd80eb3cc568cdbaa0045114b702 WHIRLPOOL 4a1e6568932db0cc4773e89e4b8f049e96ed929723ffd518ce7e0ed12bd29041d0774fba1069251a336e448dd75703a350917ffc3db5a35f2cfac828572da566
-DIST jellyfish-2.1.4.tar.gz 958038 SHA256 c4e692170d33efa9e6e4f0b134d8e257fb802832af17fdc53ac468bf8f0f29a5 SHA512 28bbaf6ed5c69caec24a09ceb2dfa99b160f3a9c2764d3f30ab205374a6f17dfc5c6d7405e75fd5161882350db160442a91568dd65ea9851e8cb74eb71f25742 WHIRLPOOL c588f4642ff0474e0565f63d2c17db03b90fa302dff9c678766e589142bc9f71a0b48e2088b24b2df15955cae85ab43aaa1ae79066113a144c8ee8bfa75594f3
-DIST jellyfish-2.2.6.tar.gz 1082535 SHA256 4532fb003a0494f6473bb97d52467904f631b94f7f9afb0d45b398f6c413692e SHA512 c3320facbbad1c6f2aede2edd7d2574bbff0e5a7f655d8b0224e511f07a319c4682adc1576a189367a546011c43d79f7b01474580dcc9c44f8e087397b475056 WHIRLPOOL e548b601d66f273f3972671ee91819ee1701bc5bba8980ee2b4e64bd4e27adcb8b1fd8b9ab0a8c3658904fb84ab28c8ebb909f6fd4c6ac990bb77aeeb5a65f05
-DIST jellyfish-manual-1.1.pdf 241464 SHA256 60738f790ba50baeba04de60fdc3f620fe670d3067501d472c7b42a401600c88 SHA512 b697c51af5bd85b779fea4f03772ac8e21713f906773350931a7d67adecb4268b051e766173122ad2ba9d168235f534ff6eaa070496d6318cf8a76c8690ab61c WHIRLPOOL 01b0fff7373b40b125be3b5d44bc0af62704e84e449943235cc8b8331ff73c6d5d4be4e69040d8bc54ae1e12e377cbe4fd66108b7fcee8379d69568e8809bb5c
+DIST JellyfishUserGuide.pdf 142367 BLAKE2B 371d04c920a6e4d25ba74238c5262a9f8c182645b73468d0bed9f519da25d8c886cb9895a8e9334169caa247ebe9f8aa4738ed2e8d7d14cd5ecfb35ede7403a8 SHA512 a9d65be7591d4b9b275b9f76ab79806d31bf7ef36b297b67b1802a302687aa8d49d4c491c3bb9201aec58268bcfc8c703940c72991b9080bbd1bde95bbda5b8a
+DIST jellyfish-1.1.11.tar.gz 1067138 BLAKE2B cda369674a939f0abda1c0ce12dbb170d679a2dfc1bb7f4da9dc3c1c0f1f1f3077bf1876f9a2ef045866c3c8bb960616641d2d46f821d861551a980f359f0465 SHA512 aea7373e5ffb9deba7e164425bd7d4219d9be1e48ca666ff41e70bbc77026bc581273fb5a07c47894e2b31dd1339d4f1bc1a7b0501f10a482353ecde082eed1a
+DIST jellyfish-2.1.3.tar.gz 955773 BLAKE2B f01891238aa819ddeb2ca3b45276f23fe209cb0015bc5874adbed6355bce44ab23c19020fd5a10779a93c29ca3d241e36fe72fb5b4ffee4a37b954980cb6b217 SHA512 2b6fea6c2686de7b568988543d5a9466676eb17252ecce3243b0dc7e3c833aed02ae6570749df58c2921289db0167b39848ccd80eb3cc568cdbaa0045114b702
+DIST jellyfish-2.1.4.tar.gz 958038 BLAKE2B 8cb3fa50858f8cc4fbb3e5e9c64f76e2d3ff4453767411a36fab1188673cbfd12f52270ee7f4269c606931f34e9805c878a05c6dcd3370b7b0de65f25ad7a1fb SHA512 28bbaf6ed5c69caec24a09ceb2dfa99b160f3a9c2764d3f30ab205374a6f17dfc5c6d7405e75fd5161882350db160442a91568dd65ea9851e8cb74eb71f25742
+DIST jellyfish-2.2.6.tar.gz 1082535 BLAKE2B 8ad044c470245132c843f93c639f9c0e502bcf41031a7a561b9c2bbfb46763d91651de5af51bf9d42bf560dbb7de9be5595aa00b9cf3a060db731a5087494780 SHA512 c3320facbbad1c6f2aede2edd7d2574bbff0e5a7f655d8b0224e511f07a319c4682adc1576a189367a546011c43d79f7b01474580dcc9c44f8e087397b475056
+DIST jellyfish-manual-1.1.pdf 241464 BLAKE2B b33e6784674cb4a296b45c7799db9b1b9e0e01687093f236fe30fd34c56f71afd796b9f8fa30857918c9d49e767e527425fa0b09eb9195705ac85a6e314523eb SHA512 b697c51af5bd85b779fea4f03772ac8e21713f906773350931a7d67adecb4268b051e766173122ad2ba9d168235f534ff6eaa070496d6318cf8a76c8690ab61c
diff --git a/sci-biology/jigsaw/Manifest b/sci-biology/jigsaw/Manifest
index bf465e28c..6f8a181f3 100644
--- a/sci-biology/jigsaw/Manifest
+++ b/sci-biology/jigsaw/Manifest
@@ -1 +1 @@
-DIST jigsaw-3.2.10.tar.gz 1033424 SHA256 a6726f17e31cb5550ab59bc232f1049815389aadc74b3375665d3932f8ef1c6b SHA512 dfce29afd91603e328da6dcbb65851674f7c396746c8091e3bd81bfb06433404b1d87778f75dfaf683eafc9736e6bd7d91e48ac4c51198bf6bdcae68457ba05f WHIRLPOOL 64f6769dcae1f9c1cfd78a71bf487cb43b5a5ee3075e2375285bd9224fcf0f4d38997938abe79e5a1390e1641396ad8779326fa8962305ea124ac396bcd31e26
+DIST jigsaw-3.2.10.tar.gz 1033424 BLAKE2B 9a254e47f32629e3613938aa0430b844ecefedf375e5a6585870f9b3a452842a7445234e190a59df2f65a2d2123c0973ba9b48ba3f0fea071f42fd2e01e683f4 SHA512 dfce29afd91603e328da6dcbb65851674f7c396746c8091e3bd81bfb06433404b1d87778f75dfaf683eafc9736e6bd7d91e48ac4c51198bf6bdcae68457ba05f
diff --git a/sci-biology/jtreeview-bin/Manifest b/sci-biology/jtreeview-bin/Manifest
index eab489083..77ecdad39 100644
--- a/sci-biology/jtreeview-bin/Manifest
+++ b/sci-biology/jtreeview-bin/Manifest
@@ -1,2 +1,2 @@
-DIST TreeView-1.1.6r4-bin.tar.gz 1491322 SHA256 613a9b447052588a594b08e485d9f913a3dbd9415f1d59ba10f0257b6ad0ecea SHA512 b60046d9f8669c9c7ad9679a7e3325ef9c937182fd9dea8f089add4845b02f9e68b6ac716745a29dd7ba342275984fa2f9efb730d188186cbfc816f649dd3d7d WHIRLPOOL 5d378700ec1e99224616537e7dfb5e29c0ded1d6d6889779893e05e37ccf714ae45fd62232aa1f4f1877625e5052197007a071c73d44ac02678a25009e990aa9
-DIST helper-scripts-0.0.2.tar.gz 18260 SHA256 b7f8958befe2becd124c62ecca7be82213cc1666b629a7202df09cfe2f95bb22 SHA512 6d335ffa4da7db2d5b2d0009e8db87145cc9b3b85772059f6afde55f544de1ee1348a8450e69393ea59313268549204be3d26931dc43085d843ff3c6c3c27d88 WHIRLPOOL 73c13f8303c556fb79698d5cb272fa0759adfda7948b1c7f4e0ec6da1deb4054e1fbea6430c37770c26bdb924e238e6f00f645dad038a917470624d28adfa21c
+DIST TreeView-1.1.6r4-bin.tar.gz 1491322 BLAKE2B ca4cee83a4abc0f718a854e6c281e9a4627ce61a39d514b123c3f6badd04ac0eac1ea730b3a3c7988b4e4c8f5946e5892b5a47601e7456659445eecdb4037b4e SHA512 b60046d9f8669c9c7ad9679a7e3325ef9c937182fd9dea8f089add4845b02f9e68b6ac716745a29dd7ba342275984fa2f9efb730d188186cbfc816f649dd3d7d
+DIST helper-scripts-0.0.2.tar.gz 18260 BLAKE2B 2f794063fa2f9263b92465b48a891efc5ae65ab3a64ade7250aa3a9f166873d9a6f9c5ad69387caa6d9f15affb907cd2b3587e7c261b862337319c0e7d7be9d6 SHA512 6d335ffa4da7db2d5b2d0009e8db87145cc9b3b85772059f6afde55f544de1ee1348a8450e69393ea59313268549204be3d26931dc43085d843ff3c6c3c27d88
diff --git a/sci-biology/jtreeview/Manifest b/sci-biology/jtreeview/Manifest
index 142bf0db4..53e7ff11f 100644
--- a/sci-biology/jtreeview/Manifest
+++ b/sci-biology/jtreeview/Manifest
@@ -1,2 +1,2 @@
-DIST TreeView-1.1.6r4-src.tar.gz 3148856 SHA256 e261125aa2cd5fa9ddbcb34bb6750a7938a3dc8fc91fed367f8df4c398186327 SHA512 a83962c4c37e3e4536ad549b5e24f69ad9cab8ba67af550d37d16bccef1926ac5b2ddf23a6e95262f02723009a336937fd49bf6786dd983ae26c85d94d78c37d WHIRLPOOL fe33da6ee2f0b47accb3ccb92196713b2ec273c4905eb9ab30c71ac75cf5550b9e2fa06e6a9d79f3d77fa43e465e09c40ca81864666510decb70d32fd9d5eb62
-DIST helper-scripts-0.0.2.tar.gz 18260 SHA256 b7f8958befe2becd124c62ecca7be82213cc1666b629a7202df09cfe2f95bb22 SHA512 6d335ffa4da7db2d5b2d0009e8db87145cc9b3b85772059f6afde55f544de1ee1348a8450e69393ea59313268549204be3d26931dc43085d843ff3c6c3c27d88 WHIRLPOOL 73c13f8303c556fb79698d5cb272fa0759adfda7948b1c7f4e0ec6da1deb4054e1fbea6430c37770c26bdb924e238e6f00f645dad038a917470624d28adfa21c
+DIST TreeView-1.1.6r4-src.tar.gz 3148856 BLAKE2B 6d6c4007cb8e6a2245050e64c6b97ab8e28be02159089b3904ed7ba58605933c42ac8ff3dfa792186fb945ab5d1649027cdf6d49eab8c406734af0eaf1de38a8 SHA512 a83962c4c37e3e4536ad549b5e24f69ad9cab8ba67af550d37d16bccef1926ac5b2ddf23a6e95262f02723009a336937fd49bf6786dd983ae26c85d94d78c37d
+DIST helper-scripts-0.0.2.tar.gz 18260 BLAKE2B 2f794063fa2f9263b92465b48a891efc5ae65ab3a64ade7250aa3a9f166873d9a6f9c5ad69387caa6d9f15affb907cd2b3587e7c261b862337319c0e7d7be9d6 SHA512 6d335ffa4da7db2d5b2d0009e8db87145cc9b3b85772059f6afde55f544de1ee1348a8450e69393ea59313268549204be3d26931dc43085d843ff3c6c3c27d88
diff --git a/sci-biology/karect/Manifest b/sci-biology/karect/Manifest
index 2360fdf9f..243eea561 100644
--- a/sci-biology/karect/Manifest
+++ b/sci-biology/karect/Manifest
@@ -1 +1 @@
-DIST karect-1.0.0.tar.gz 239445 SHA256 9d2a65af2952c994705ea196cb580511b6f28cff6722880c83cebd9fb5b25da2 SHA512 c833a862c15027eaf84eff7ddf1cf36a369fbd94bd44ab596fcee89e402e1517ba3ef2646591365d273f98f1e3f13b6ad990f73660e440f0a45c87b84a08491c WHIRLPOOL f7846ae0eae3fea4ce01c53c1203e6b290f2007bcda14117d532a475486627b15a02c5a486b80187c1b62d4faba6b9cf8a02d177c3f4c059e0d457aa220f31e3
+DIST karect-1.0.0.tar.gz 239445 BLAKE2B be9c5b00a68a96b59a97e9c6aeef71388faaf4dedb41313ba1e6981a8f8bde84baef86c000a291d4063a9a92e66d25344b81e25202bf7aea13c92dddbbf8b7dc SHA512 c833a862c15027eaf84eff7ddf1cf36a369fbd94bd44ab596fcee89e402e1517ba3ef2646591365d273f98f1e3f13b6ad990f73660e440f0a45c87b84a08491c
diff --git a/sci-biology/kat/Manifest b/sci-biology/kat/Manifest
index e6ea1a6c3..f7e8a27ab 100644
--- a/sci-biology/kat/Manifest
+++ b/sci-biology/kat/Manifest
@@ -1 +1 @@
-DIST kat-2.2.0.tar.gz 14253573 SHA256 ea36dbf409900b84095ee9ee7e1bf34e105b24256eea2a45225794755e58daaf SHA512 d322fe326cef787a370e93ebe5fd4f672c718cbae696ca9ba7d7087f75b729a18eaf365b2dec1fd57ddc9f688ec875baf5cd92f5765603cf0b48a90d6376bd1e WHIRLPOOL 78369d6767f16bd8a4c121fb084e7802880dd24f9ba7d49a9ec1e9e897f1e650739b5fb781fefe8fe88f130b7907fe906aeeeeaf78cac3de586574b2907767a3
+DIST kat-2.2.0.tar.gz 14253573 BLAKE2B 681acc2de131ff788ec1815597025f9cf59f2eec0b4f717838a591cbd190e2060f99adefd4365077ffc3d5500d025ddc0b9e5dc091e0bf88fe8c8c79819975eb SHA512 d322fe326cef787a370e93ebe5fd4f672c718cbae696ca9ba7d7087f75b729a18eaf365b2dec1fd57ddc9f688ec875baf5cd92f5765603cf0b48a90d6376bd1e
diff --git a/sci-biology/khmer/Manifest b/sci-biology/khmer/Manifest
index 01367e5fa..83beb745a 100644
--- a/sci-biology/khmer/Manifest
+++ b/sci-biology/khmer/Manifest
@@ -1,2 +1,2 @@
-DIST khmer-0.8.tar.gz 18924997 SHA256 3fc678c7c7987a2e203ee053270e9565d1fc845ff472851e52c93efa19887c46 SHA512 712c0879f686fc279c34be371b1926b42322ba1f2cc679fbc61bf682096cc15c4170d30cf7280d8153af61a23fcc34412b8833112d046de4225bb64808bd37a4 WHIRLPOOL 8115de1a306eb721cfc0d3e3f0a4d4c1e99fe98b40138237fe87f50d011e96bfe40da5aef7ef39e2ec018567bb67473b706464d40f70869a8d39a3612a30c556
-DIST khmer-1.0.1.tar.gz 18975505 SHA256 9ab86b43de964265f94cb535ea9de41bc3868710561c5daa29e540e8237c27a0 SHA512 930dd3795a2921794a9f67da6352752fc8bd6baff15292f8b354d821883b429c422bda4f03501442bce65dfce3cc50eebdb2773056fb6049659536831f8929fd WHIRLPOOL b53fa662144572134019eb7ca5e474ccbd18aec286ffacf3ef013d562a6cb5a264ea367eb5b4151d77b422e42b35244d0331c5d0395767c4c4bb5c2ac01d601c
+DIST khmer-0.8.tar.gz 18924997 BLAKE2B d1996f40f14875bad7712ee7711b3dd67561da212c5c0d61c166218800108a1181d5b767272aa3d4cbd8a0bf243309dd113d6a32a672a90b7b654df785450822 SHA512 712c0879f686fc279c34be371b1926b42322ba1f2cc679fbc61bf682096cc15c4170d30cf7280d8153af61a23fcc34412b8833112d046de4225bb64808bd37a4
+DIST khmer-1.0.1.tar.gz 18975505 BLAKE2B 352452cff425ca9b497d94933844c1ee89cbc7a41118625e797ccee367322348e7d58efb1d15c657265a374a03301b967a1f497982b250d58fe21549b72e620e SHA512 930dd3795a2921794a9f67da6352752fc8bd6baff15292f8b354d821883b429c422bda4f03501442bce65dfce3cc50eebdb2773056fb6049659536831f8929fd
diff --git a/sci-biology/kmergenie/Manifest b/sci-biology/kmergenie/Manifest
index 4f45385ab..8403e72d3 100644
--- a/sci-biology/kmergenie/Manifest
+++ b/sci-biology/kmergenie/Manifest
@@ -1 +1 @@
-DIST kmergenie-1.6971.tar.gz 422649 SHA256 a0a39046321f2e8cc32ca6e3538ed827ef61d568c799610d268725cffcd16ba6 SHA512 43dad36b461444023c0f730bd8097f2481e958e58db9fbe32ce6e38414438a946d3e648ec719bda63215661457ff1d3ce805631203f2ef69e3ffb8aa2075325d WHIRLPOOL 2d113ffac7d50a68335e3fc1a444700d944d854427c2ba808d7464f80c4f49a299df496b23ec0ced71f770c7a19a6831af8a94033b55d707e6b91cbab941e4d5
+DIST kmergenie-1.6971.tar.gz 422649 BLAKE2B 8eeb2fc8d0518c38aca7bd127410c016ec6e1f2a6f10b03045a21ccd5800ca3f627d083762d3aec5beeb073577cd2cc5f98e8c267833b79071ae354716ab7962 SHA512 43dad36b461444023c0f730bd8097f2481e958e58db9fbe32ce6e38414438a946d3e648ec719bda63215661457ff1d3ce805631203f2ef69e3ffb8aa2075325d
diff --git a/sci-biology/last/Manifest b/sci-biology/last/Manifest
index 35ad39b82..eadb2539b 100644
--- a/sci-biology/last/Manifest
+++ b/sci-biology/last/Manifest
@@ -1 +1 @@
-DIST last-852.zip 721683 SHA256 1b5d14e5238834cf9c50f950efc97e111977b101d12bc502eef5a8800ef724aa SHA512 9945967efb5025b72507dfeb28531e1595d9691096dc2d074711fd1f5cce92714341a387577b7c6054f3b2605084528817381ed6f39bd32e828341f4a06380b9 WHIRLPOOL 3c4e8d20ce12eef5d2844ad98f3025604d9387ec1cd1e06b36a953b0867717ef0e8b4788b48c7c1c3e0ac7158594f4a3a7092e56ca34b36e315f2e2a7f9e47b0
+DIST last-852.zip 721683 BLAKE2B e2a8d1c59d369f580e46723c2153ffc406f781502c7d7fa60dbc50556ac14703122d76c1a2ec8d938c6dcf0954d02347ee3d4beef60515839c248fa7e6467e18 SHA512 9945967efb5025b72507dfeb28531e1595d9691096dc2d074711fd1f5cce92714341a387577b7c6054f3b2605084528817381ed6f39bd32e828341f4a06380b9
diff --git a/sci-biology/lastz/Manifest b/sci-biology/lastz/Manifest
index 1b4cc1eff..200d02449 100644
--- a/sci-biology/lastz/Manifest
+++ b/sci-biology/lastz/Manifest
@@ -1 +1 @@
-DIST lastz-1.04.00.tar.gz 734145 SHA256 dd2e417c088a794532125d4c3e83a2c4ce39e6d287ed69312fb8c665f885ed52 SHA512 fa027141d8c797e9c425755b928bd40616ea193bfbd99ebbabc7bc44042edb894eafc493e9953a48cda94702109a9ec295d12c334f3db225e9880d51488e7972 WHIRLPOOL 8b4ef3bd3c9cdd4d3fdffc294d232a93b33399bd46b62f58136319e40c65220329f891b975fa317c56932b779737e4e4ea4eb317d52be8b9ef438db74db754c4
+DIST lastz-1.04.00.tar.gz 734145 BLAKE2B cb738d2be8c30fc10a56a360042db768317d9adbd296523b13d5ea75044716653291b53df4645e847901e5c40b348c3c45aaa3dee40fa6b2942c9c49d6de5fe6 SHA512 fa027141d8c797e9c425755b928bd40616ea193bfbd99ebbabc7bc44042edb894eafc493e9953a48cda94702109a9ec295d12c334f3db225e9880d51488e7972
diff --git a/sci-biology/libBigWig/Manifest b/sci-biology/libBigWig/Manifest
index 540440013..d7a42d43b 100644
--- a/sci-biology/libBigWig/Manifest
+++ b/sci-biology/libBigWig/Manifest
@@ -1 +1 @@
-DIST libBigWig-0.4.0.tar.gz 268726 SHA256 ecf466c412819a1a0aa6c105d8b71481b90994cb8a6c028511c4617f0dc8f064 SHA512 9849264b21b2c000acd31bc82137e4342ef866c9ac7d65b5fe5794df7ff4e1e35a190f970135071044df787bd6f4041fd1f6e14773266966a0623e8c5e979466 WHIRLPOOL df5de9a156f9e21bfa593891c5b985a7a1ba0f18cc68c8335f0a8d45f0e7f6d827ce4eb7d2c68194c8cf9439bcf746998e1052ea00829c02756bc375efae76c9
+DIST libBigWig-0.4.0.tar.gz 268726 BLAKE2B 7cd3153d5979b2c038e47c5cd99d855e23898c95f983a7883cb26be398f87cb918fa5f7ef2323245e48f180a01222d6988c5c2311b02add429cf7142308a895f SHA512 9849264b21b2c000acd31bc82137e4342ef866c9ac7d65b5fe5794df7ff4e1e35a190f970135071044df787bd6f4041fd1f6e14773266966a0623e8c5e979466
diff --git a/sci-biology/libgtextutils/Manifest b/sci-biology/libgtextutils/Manifest
index 11990dcc7..9480b9ec6 100644
--- a/sci-biology/libgtextutils/Manifest
+++ b/sci-biology/libgtextutils/Manifest
@@ -1 +1 @@
-DIST libgtextutils-0.6.1.tar.bz2 273459 SHA256 b70cecb4e6897d83e3105c46e4886b808a34c28396dc71ebe1c8dc9637fab725 SHA512 0bc392385f9e6c345dff82b3fb04f322e8aceca769e15a3a87da6c718b6e9a7e1de082940d4bb0339a4c3a86f706fde0de047df459682aa9ea216d6e5c17eab6 WHIRLPOOL 0c756010028d22659e6c3ec037ead56bd778fb93a3a351e69ed350d66d410c205490bef8db4fd5fae57cb9509f5ef16cbc112e6770b6aa7d2e853b03a4c1a490
+DIST libgtextutils-0.6.1.tar.bz2 273459 BLAKE2B 81b1e9b467287ed9551fc53abddf5757efb2dd1c98f0388e2128535fbe70b706badd5702a5b5c3cb19a34c26ffa218c9c41caf9f17770a015b09fc13fabe4d53 SHA512 0bc392385f9e6c345dff82b3fb04f322e8aceca769e15a3a87da6c718b6e9a7e1de082940d4bb0339a4c3a86f706fde0de047df459682aa9ea216d6e5c17eab6
diff --git a/sci-biology/lucy/Manifest b/sci-biology/lucy/Manifest
index a73245913..acede58b4 100644
--- a/sci-biology/lucy/Manifest
+++ b/sci-biology/lucy/Manifest
@@ -1 +1 @@
-DIST lucy1.20.tar.gz 1457619 SHA256 e06313f6d60b1b1429aad6c86c02df22edc6337613fafa5db0a09a09c7a35af3 SHA512 8e182f8ecb84f374a2f40e39645dde724520c87b78bc9cfd4975ea32ad69fceccc65a899010401692f96f297e07b5f89061ab9ad8975fafd3e99c57e7ae579e2 WHIRLPOOL 99143d66b3351ccd68ae1b66199d99eb3e6f8680b64601b36f63fb4ac679b990a28ee3131fa821cf9f6f04cb935c4b5750dff5e9fdeab79f40636d1cb3d5cccb
+DIST lucy1.20.tar.gz 1457619 BLAKE2B b35a245c2065fe62f3f6face4a4cdcd6b30214bcc2e803fa852b3531117d0a689d4e6dc984d2cd9e8d623ab463e48c9981f929df0a2b8119b442731fd2105016 SHA512 8e182f8ecb84f374a2f40e39645dde724520c87b78bc9cfd4975ea32ad69fceccc65a899010401692f96f297e07b5f89061ab9ad8975fafd3e99c57e7ae579e2
diff --git a/sci-biology/mRNAmarkup/Manifest b/sci-biology/mRNAmarkup/Manifest
index f09fec6e7..f14ab8b9e 100644
--- a/sci-biology/mRNAmarkup/Manifest
+++ b/sci-biology/mRNAmarkup/Manifest
@@ -1,2 +1,2 @@
DIST mRNAmarkup-10-3-2013.tar.gz 225283371 SHA256 4fce294745dde0e55c0dda71c9c186d2372c28850d26cc7f4db68b23278f84a1 SHA512 bf752ed2459bb01ddb6d982a7aee4417634a52c42be5eda56f680aaf77e5e37c6feb3199f03784e754d95a417b9cda3eff83e47c31a733365f25e93a4c412303 WHIRLPOOL a3905f30aeda2980b803a50734529d4eca8b216398eb6db1b9d38bc372b5470971e50b87cfffa59c7d84c64333c5b6422facbe4574947f2f170ad28291b31f14
-DIST mRNAmarkup-4-8-2015.tar.gz 192523324 SHA256 51baed40d6ca3a4c7421068158289bce37d3b600c75639deef8287de759b92eb SHA512 caf537f98bf3a11e28e47a6e6833eb70e1f810cd1ad3033d30f7a941fb136f08e243abb373a105a86191ba939fc56537967ef598f714d1a8f40f6ee9967732b3 WHIRLPOOL 71dce3091d9766b56b9e0ff6c320787788c3794fa2a56fb2ee43d5c08e539bd55be9f68cebbdcaddc8c1506232f0beb3a221f58901f0033e4299b4d619a4b12d
+DIST mRNAmarkup-4-8-2015.tar.gz 192523324 BLAKE2B 5a327c1cef195bb637eb5cf22f030f1e18c4a7374630dee0f777e68b86888b558a07766aef374c9c1373154ad04e728c105c803372707321c0ec0cabae55f143 SHA512 caf537f98bf3a11e28e47a6e6833eb70e1f810cd1ad3033d30f7a941fb136f08e243abb373a105a86191ba939fc56537967ef598f714d1a8f40f6ee9967732b3
diff --git a/sci-biology/manatee-igs/Manifest b/sci-biology/manatee-igs/Manifest
index bb7975749..05b1077e2 100644
--- a/sci-biology/manatee-igs/Manifest
+++ b/sci-biology/manatee-igs/Manifest
@@ -1,2 +1,2 @@
-DIST README_Linux.txt 9628 SHA256 b08bf592d0e81595eba5354e942051e159d3c0a27a8a24a6a78ddc760b4433e3 SHA512 7cfb666c1bf066595a6f0fae8a9cff1e6a7150382c33e5ea717b9e09bb91ee2e8eb9bae0fd9e93a0a790a39fb2d66ba83029e5ab55755e56ee85958a5df8a99a WHIRLPOOL fe1d403d9c8a5a2277fdeba38c9c6cfd53f434ac1ef1fa7c13247799b6d49fce4f9300e11f8f395790c5c5620da36b10f5b77cbc6ab016cd41d158afc610ddee
-DIST manatee-2.23.1_linux.tgz 19879146 SHA256 2fca0e6662c2ac56add013a200096d550911dca7ebc83c5932517edad4181533 SHA512 50a76d36f69e3b8b80bcdf7fe28e1c9eb7c15bd8889bd8d130bc65f879ec99aa0caec6d0df495d7ab5804e6414599fc316073c9c55ecd1d370c5dd72aadd65ba WHIRLPOOL b4bc3d00fe0496b8aa12a6ec7912615723660746190b44e011f167b5ea68781ae103f7a2267e4c6ef54b19798002d30f4a28eaba148256541bac2dd588c81663
+DIST README_Linux.txt 9628 BLAKE2B c44cb04313f30726b5d7a1943de3ff39651e3b869fe664ac570063958dc75210dedaff9c5c4e3feedb3e05bec4eb3c149600c8188dde00291570b3695cd3116b SHA512 7cfb666c1bf066595a6f0fae8a9cff1e6a7150382c33e5ea717b9e09bb91ee2e8eb9bae0fd9e93a0a790a39fb2d66ba83029e5ab55755e56ee85958a5df8a99a
+DIST manatee-2.23.1_linux.tgz 19879146 BLAKE2B bd69d0d701c92ad4e4c8bbfdf8c9cb23184fa2778a924f71dd83e01901a8054296fb32adb58c5bb66d442b29c564c31c8690398479d214e020697726fc413a59 SHA512 50a76d36f69e3b8b80bcdf7fe28e1c9eb7c15bd8889bd8d130bc65f879ec99aa0caec6d0df495d7ab5804e6414599fc316073c9c55ecd1d370c5dd72aadd65ba
diff --git a/sci-biology/manatee-jcvi/Manifest b/sci-biology/manatee-jcvi/Manifest
index fb6f0f6b8..9efd473f9 100644
--- a/sci-biology/manatee-jcvi/Manifest
+++ b/sci-biology/manatee-jcvi/Manifest
@@ -1 +1 @@
-DIST manatee-2.4.3.tgz 1840410 SHA256 52034f56038334a4a516acf3490097776cb0e8b4572aa02c86473ec9c493265d SHA512 0bfb9dff8bdaec1e602fdaa1ec6e2939cba1813ac639b95b9e2679e3473719ad74bb383ba54c56cf4dc0553eac002ea3955ae05a1bc87215c7553b9edb9f9fcf WHIRLPOOL 871d8f353fa20f0a6bb745b29f330ff224b05d1b57b95dca497ab319aaecc8f9315e8619900f50fbbc5e461e7676638f80edd4508b59a09bacdb5903546a4833
+DIST manatee-2.4.3.tgz 1840410 BLAKE2B e80b499e4a9a6fddc60851e1da126dc48356d675df36938f1ed1a920f19a5f76708fc4be295164ae69330d1978cebbf6e6b9c1f7c098e8049710a3e48eeee0d3 SHA512 0bfb9dff8bdaec1e602fdaa1ec6e2939cba1813ac639b95b9e2679e3473719ad74bb383ba54c56cf4dc0553eac002ea3955ae05a1bc87215c7553b9edb9f9fcf
diff --git a/sci-biology/mavid/Manifest b/sci-biology/mavid/Manifest
index 83dcf5f8b..232b32ab5 100644
--- a/sci-biology/mavid/Manifest
+++ b/sci-biology/mavid/Manifest
@@ -1 +1 @@
-DIST mavid-package-2.0.4.tar.gz 85863 SHA256 9cfb216635ba463e8cb6de4e5e661c9e9c6d408af50a449af018ebfd11cf896a SHA512 6c64e51df3069859bb0226efc078c488c0b5602e9fcd5fa7f596a29f07c279ccdfca580c947fbd4efdac66cbc86669f5d2388a68f3e861d45c8979d710e65e00 WHIRLPOOL 62e126071d687b855e7bac3099219ea1afe360cbec683b51fc86a65aa00de54d07c235fda22be587b075fe9c87fe088f04a6b6f0af533ceb03deddaab227d258
+DIST mavid-package-2.0.4.tar.gz 85863 BLAKE2B 3ff4a914e8796faefb7799bef597638e2581885338dfe8c841290cbf4560da95c57495c2c9a7f93ce8270292f440e6ad78f41ad9eb5ee6553f4872c342baa823 SHA512 6c64e51df3069859bb0226efc078c488c0b5602e9fcd5fa7f596a29f07c279ccdfca580c947fbd4efdac66cbc86669f5d2388a68f3e861d45c8979d710e65e00
diff --git a/sci-biology/merlin/Manifest b/sci-biology/merlin/Manifest
index 93ba12834..efd69d73d 100644
--- a/sci-biology/merlin/Manifest
+++ b/sci-biology/merlin/Manifest
@@ -1 +1 @@
-DIST merlin-1.1.2.tar.gz 609007 SHA256 aa3c087b1c717209389705bf2ace4c24884575014a561dff250c0be93fe1e411 SHA512 1bc621026e8f1c84c3d8560f19fb40837ba312b3de3ef4299ccbe9451ef709b89447a53be80ccc6b393693118b67f9cee2044f85ddf85d7d60c45b925c0c1c32 WHIRLPOOL e7c5536b2c1f9803b54512a2e3226f155eb00fac3da5bfbac9e6826eebc9793059a00deb34be3d2d1a3f0a9f58d2c1ae52f241c5a20dba42eb9d4d9ead6ee395
+DIST merlin-1.1.2.tar.gz 609007 BLAKE2B be4f953e95e1570f36ecdac5aca23c5ed952828a53b721839df1ef6a6b7f318071be6eb2503eb82f1df743eb7c1ab9a658b8b3551dd767bedc389f62775fadea SHA512 1bc621026e8f1c84c3d8560f19fb40837ba312b3de3ef4299ccbe9451ef709b89447a53be80ccc6b393693118b67f9cee2044f85ddf85d7d60c45b925c0c1c32
diff --git a/sci-biology/metaseq/Manifest b/sci-biology/metaseq/Manifest
index 933c9b385..8abf162d1 100644
--- a/sci-biology/metaseq/Manifest
+++ b/sci-biology/metaseq/Manifest
@@ -1 +1 @@
-DIST metaseq-0.5.3.tar.gz 5233997 SHA256 28d55b7f584100c2c7a47e761a13490bf3a4f19721adc991d767a4e707a3de14 SHA512 18e9aa7260d076c0332674dd99e189964f49a5af689858905f43b8ef4168923c50cc9a42ce53cd0865329663d76863c95eb1c4fb125c62b2e03026bd6f0bccac WHIRLPOOL 9d3257a7f1d88f914a2397d6f189955fce95788a59edc27fa5a7dfe9c5ee9c55dcb4b60a3ee0b432f776dc3edcd6c725591cedf839c691d578e128a6c006eb53
+DIST metaseq-0.5.3.tar.gz 5233997 BLAKE2B a3af67882efbcb497a7eadf78d50538887d4db18a92b3bf0d5613f16e3ca5335026546ba0663e1231439979c2c557e07790f0681591689137b9b040fefb4eda5 SHA512 18e9aa7260d076c0332674dd99e189964f49a5af689858905f43b8ef4168923c50cc9a42ce53cd0865329663d76863c95eb1c4fb125c62b2e03026bd6f0bccac
diff --git a/sci-biology/mgblast/Manifest b/sci-biology/mgblast/Manifest
index 8fc005949..67b6fdaf4 100644
--- a/sci-biology/mgblast/Manifest
+++ b/sci-biology/mgblast/Manifest
@@ -1 +1 @@
-DIST mgblast.tar.gz 22904 SHA256 eb790a0e3979b511f289e440f8bc381788509e80a214792315356a23af151cf2 SHA512 64e36e7bcfd013c85d7b7a79a0728dc2e3aee476772550147680ea2bdd2d3255d4ee9e20a26f886e459e34b42f47082fc34581a60112d99774d291664f45819f WHIRLPOOL ed9539bc89269b8bf99b447b80b711fa32789303ae369195115d0948cd4ac94b09254e58a4687e07e82517747d3b27b864e5f179b728142cf28402e1fc1a9cda
+DIST mgblast.tar.gz 22904 BLAKE2B b56d16ef878e32ffb2673889c55c658156620f89753205fb013578b04caea175d67c41fba830c3cb8bce6ac90cafa4de13c7229d5f47972946060b3e3f247261 SHA512 64e36e7bcfd013c85d7b7a79a0728dc2e3aee476772550147680ea2bdd2d3255d4ee9e20a26f886e459e34b42f47082fc34581a60112d99774d291664f45819f
diff --git a/sci-biology/mip-scaffolder/Manifest b/sci-biology/mip-scaffolder/Manifest
index d782f49de..88bd1e51f 100644
--- a/sci-biology/mip-scaffolder/Manifest
+++ b/sci-biology/mip-scaffolder/Manifest
@@ -1 +1 @@
-DIST mip-scaffolder-0.6.tar.gz 34118 SHA256 f75a60dddf6111c77714b5fd22156fdd8a1a8f503c8f15bf607ee2503588dc3b SHA512 8d5906206980dbbcc02bd2f827d2ba2cc415019c6839ba34028099d43a351bdf60c81c3b1a651292e758ab57461ddb7e828fe1aba3939ed6a97b3bcc9a5d945a WHIRLPOOL f1ea739abc63d9ee55f1d0c1c161eec4faa08b7bd1fdbbf2fb7bc53f844b909ecec0d2c214345b4dad34d47baab47e481f76a9a3277284459235330cb7fc4a6d
+DIST mip-scaffolder-0.6.tar.gz 34118 BLAKE2B 1b3835149776b0eca3f8a7633862a39d5588802247a530f13b0f60aaaae04b1eb14968ce014161d70ce2f0c408941d238de1f5dd8972c03ceaca022147736079 SHA512 8d5906206980dbbcc02bd2f827d2ba2cc415019c6839ba34028099d43a351bdf60c81c3b1a651292e758ab57461ddb7e828fe1aba3939ed6a97b3bcc9a5d945a
diff --git a/sci-biology/mira/Manifest b/sci-biology/mira/Manifest
index a095295dd..7f796dec8 100644
--- a/sci-biology/mira/Manifest
+++ b/sci-biology/mira/Manifest
@@ -1,2 +1,2 @@
-DIST mira-4.9.5.tar.bz2 10444005 SHA256 07160f9847edcb5109fa9085109f73a18849473fc2afdcda1118faf3c5fc3d77 SHA512 f56bd9e1c6982b501534bc8c64fed0ed81f20505546d6e79b48cfed3d82780a43691e985f5be3910af55adf12a955dbf1901cb1da1f182636d5e1357d8129cf8 WHIRLPOOL be0abe4213ecbe40534bee65dba390ac3695d3763123ad93c4a32bbcded15aa2f99ef93304b8e4cdc65728f0859e2748ad828826919bf7e4fc6b8499bccbdf9c
-DIST mira_3rdparty_06-07-2012.tar.bz2 31656 SHA256 53cbbb9d57e2fa51706b3f1d055621c0863091542b8851f3ce8a45850951d7d2 SHA512 4d4dbdf7ab5126f9d47160bee8bc127b6a225de8087f6b9914c754324a74d966333207c86a3f38cf0ea9f91408707e2a24086dbe1318fdfa2870b0c39bc5033b WHIRLPOOL c9946ddc032d6864a33e7a60a4d1a515262ca2204535c7d81dcc73144b4f471f766007082d1912fc4ca219a9cbb4ac5a485451c625a7ffcc1949fb8574a3f3d2
+DIST mira-4.9.5.tar.bz2 10444005 BLAKE2B aa4d342cedf3a9545250ce1bad45397b7e73592359984a216ef7081a7a53747113da5662990258d94493d492d1695b52ebb7373752408e901820cf569f79c511 SHA512 f56bd9e1c6982b501534bc8c64fed0ed81f20505546d6e79b48cfed3d82780a43691e985f5be3910af55adf12a955dbf1901cb1da1f182636d5e1357d8129cf8
+DIST mira_3rdparty_06-07-2012.tar.bz2 31656 BLAKE2B 7e952d96e9073acd8ab1d1fc7c51c37f6526287d31698c5090500d421147285b535e8cab7e49f4e51a5634c901d1cd969206b1727e683d3fcebdc195399e3589 SHA512 4d4dbdf7ab5126f9d47160bee8bc127b6a225de8087f6b9914c754324a74d966333207c86a3f38cf0ea9f91408707e2a24086dbe1318fdfa2870b0c39bc5033b
diff --git a/sci-biology/miranda/Manifest b/sci-biology/miranda/Manifest
index 68809595d..bbaabd582 100644
--- a/sci-biology/miranda/Manifest
+++ b/sci-biology/miranda/Manifest
@@ -1 +1 @@
-DIST miRanda-aug2010.tar.gz 198538 SHA256 a671da562cf4636ef5085b27349df2df2f335774663fd423deb08f31212ec778 SHA512 fad270805f99fdca400bab07bbe79a624fb946d1c868bf0bbc5a274e15c20c1926869caea9bcc48f96473b63e70530adebace2ab368b6ce12252b0bb417f9428 WHIRLPOOL a2e4ffdeb3d68de20d67bbb2e55cb6ae6c8ecf61186db647cfe8c019223244e8ea0bb6c06a4d2e166025b82ab53c73fe286f09a2d0af454a95710bbaec22ce8b
+DIST miRanda-aug2010.tar.gz 198538 BLAKE2B 4f2501c7c545f7933e766c343d396a5a035185afd8c93aa0fa73d61a1b4a8095827c567d3bcfbca9c1bbbb4214f5ce2fc1a89ed8e3b939e7bd7b496e23442326 SHA512 fad270805f99fdca400bab07bbe79a624fb946d1c868bf0bbc5a274e15c20c1926869caea9bcc48f96473b63e70530adebace2ab368b6ce12252b0bb417f9428
diff --git a/sci-biology/mothur/Manifest b/sci-biology/mothur/Manifest
index 73f451cdb..a4c1e3b43 100644
--- a/sci-biology/mothur/Manifest
+++ b/sci-biology/mothur/Manifest
@@ -1 +1 @@
-DIST mothur-1.36.1.tar.gz 1785450 SHA256 9dc1b78cc216dc333bb872e21d774ba0265820a3b75c10e1e68c3551d3e3b336 SHA512 c745efabbdc859f470b07d22266a3ad97fa81c011bc7ff1b705aa76d4d118ea81dfa58754f96e3172a393a29625e0aaa253252f76e442572fca869ccdc34b2ff WHIRLPOOL e5b4599374453f24a5798c4f56dc8d89b9fd6c2db30e43ec919ac9af1cb8b978d3cab2cfd2de8da83bcf8f7d0d0040c719e6b7e79f35a99590c3918ddf99cfc0
+DIST mothur-1.36.1.tar.gz 1785450 BLAKE2B a57e0e460548ca60a6214c22e94e453403387fc67e4ea46768662a9905aacefe7977b2d936d9bea2837b1e5b14c333e8936632d3414ece74e01e417994b12cde SHA512 c745efabbdc859f470b07d22266a3ad97fa81c011bc7ff1b705aa76d4d118ea81dfa58754f96e3172a393a29625e0aaa253252f76e442572fca869ccdc34b2ff
diff --git a/sci-biology/mreps/Manifest b/sci-biology/mreps/Manifest
index 29478ac81..23c8e069f 100644
--- a/sci-biology/mreps/Manifest
+++ b/sci-biology/mreps/Manifest
@@ -1 +1 @@
-DIST mreps-2.5.tar.gz 28084 SHA256 068156625b78b307e9a31a7662e1c3ccdb9d2616b24269cc1239ac1f61b59b24 SHA512 6a7a4ea48d497e5c71a7702b30e133758ec84465ad20df4307212b8e15e320ed9a2bd1e45faa1a5dca00d22499ee72bfc11e268acaf2ed836d341482b17ac3ef WHIRLPOOL e95c0521c2be4166359f6aea01d5e2bdbf670539ae12294e51fe5745b57e8000495aa2955e853f5b2007762c2348b9af8b19393370a5ebda98d43524af666709
+DIST mreps-2.5.tar.gz 28084 BLAKE2B eed5b7b3d04f611ed4d889caa4654a67242e776221017f969e0d90b7a7c7e1e0cee8bc32537455eb396297165f3d9fbfbe0d3bc645bd714c8ccf92640b1fff9e SHA512 6a7a4ea48d497e5c71a7702b30e133758ec84465ad20df4307212b8e15e320ed9a2bd1e45faa1a5dca00d22499ee72bfc11e268acaf2ed836d341482b17ac3ef
diff --git a/sci-biology/mrfast/Manifest b/sci-biology/mrfast/Manifest
index 091754d4d..51acc4d38 100644
--- a/sci-biology/mrfast/Manifest
+++ b/sci-biology/mrfast/Manifest
@@ -1 +1 @@
-DIST mrfast-2.6.0.1.tar.gz 51200 SHA256 8635a217a91dcc1d16a21d4ad34898bd4e9a0080cc101f9cf7c28b172db31e8b SHA512 9bb3395f0d51cea9f2a7d85831913847cdf67c1995062593ccab25de2dc0a9c2cc7631c090f7c6c3e87a71244cee6882b342b3816e359f982838695240bebb76 WHIRLPOOL 45db8d343453c6fd24b3d7fe1eb6286991157e8bed93bfb0e678c220165b7f1a3784998a73f1e4fb94914858062262031869dc2ed9feff1c58ffcd57b55b5a51
+DIST mrfast-2.6.0.1.tar.gz 51200 BLAKE2B a746bfb5144a30d04b1431f7aee44a4763acfedcc2efc850b3fe0af239bd82364d33103bf623ace63002aa0b9ebd1765d282410a0bcb0592a549834b54a81049 SHA512 9bb3395f0d51cea9f2a7d85831913847cdf67c1995062593ccab25de2dc0a9c2cc7631c090f7c6c3e87a71244cee6882b342b3816e359f982838695240bebb76
diff --git a/sci-biology/msautil/Manifest b/sci-biology/msautil/Manifest
index 969132303..30da698c3 100644
--- a/sci-biology/msautil/Manifest
+++ b/sci-biology/msautil/Manifest
@@ -1 +1 @@
-DIST msautil-1.1.tgz 22675 SHA256 f628e0eb6e0c6742871d91e6b0264b1a7d532c6827cbe5a6d0d60bb5a99a0749 SHA512 60606702c48ee0581c97d967948de243547b3f4c47558380ec8dea9ca70f9b8d88c952d2a2d4a552ac1415c419e1b3eee3a2d87cf7c4a11853e438ed973ef585 WHIRLPOOL c28b9d91389d9c24f6a676b67c192bcbd1cdd772d9d25d0b5f9a2875e67d4dbf8779d047d4f70013711150a99470656c622ac40caadac77d96c384ab563edc45
+DIST msautil-1.1.tgz 22675 BLAKE2B d7a039fdc94d80a5d34b452ff9821a1ec460750ece4f4bb4905f7e3a70378cdc39a2aa0a15e47c2a72896e5bda1fed26bb6bb3d71aa1dc2233dfa1ab641190f1 SHA512 60606702c48ee0581c97d967948de243547b3f4c47558380ec8dea9ca70f9b8d88c952d2a2d4a552ac1415c419e1b3eee3a2d87cf7c4a11853e438ed973ef585
diff --git a/sci-biology/ncbi-blast+/Manifest b/sci-biology/ncbi-blast+/Manifest
index c0683d041..2fc318de7 100644
--- a/sci-biology/ncbi-blast+/Manifest
+++ b/sci-biology/ncbi-blast+/Manifest
@@ -1,3 +1,3 @@
-DIST ncbi-blast-2.2.30+-src.tar.gz 18985378 SHA256 26f72d51c81b9497f33b7274109565c36692572faef4d72377f79b7e59910e40 SHA512 501727486aaa384ee5c40368332243ec2e19f22ab88f50c9396b4d33738bde4dbb5d3a1025ae599c1b5f4b4dd3d065ba4d0eb30305f42bfc781c95bbc4140a17 WHIRLPOOL 64f63fdf1502f3d069ffa645b378fb50469d689b70eefbbc85e04bbe4ae896d1e4dfc860a81e2d7c27bc9484eb6a9651ac02ee1d712b9a511d33a9be241154e9
-DIST ncbi-blast-2.2.31+-src.tar.gz 18971327 SHA256 f0960e8af2a6021fde6f2513381493641f687453a804239a7e598649b432f8a5 SHA512 2681a4394cc250d1ee545cd85dc962d73b1dbbdd987790a029bf51a58e74cbb08b5c8cf4a02b9b7c95916e3fb0d1613e2ed8631bb7ad683156759421081bb4ca WHIRLPOOL 65e93f87d4c48d8c44cf90c672bdb2035ddb960a388d46f6438c113972392ac23ec0b859a4ecf9c3493c4ee7739dc1f54e545f2758aa889c61d0d95ef9f0a173
-DIST ncbi-blast-2.6.0+-src.tar.gz 20025526 SHA256 0510e1d607d0fb4389eca50d434d5a0be787423b6850b3a4f315abc2ef19c996 SHA512 ea6444892a0b10459193d33d243b5960ad206b702e01e94a554a5ebda0291ff45e1ce43479713c23a96eba676b40bb8c57a7ef9dd2118729feef6b2cd98560c6 WHIRLPOOL 1283f8b6eb04e910245963bc2931d2de88bc21128266c28c16ed65b8365e0b12909d3395035c0cf7a19ee7924cea4facc1dd3246175f10dd5e64dcb12a1061a3
+DIST ncbi-blast-2.2.30+-src.tar.gz 18985378 BLAKE2B 59e749964ee5c6e30ac0286fc928fa8806abfd01aa70d937751642929de4d4e8ebc2109061f5dc82baf7e517a8718e1e11b9372c84f8be3b4140f55708ab264b SHA512 501727486aaa384ee5c40368332243ec2e19f22ab88f50c9396b4d33738bde4dbb5d3a1025ae599c1b5f4b4dd3d065ba4d0eb30305f42bfc781c95bbc4140a17
+DIST ncbi-blast-2.2.31+-src.tar.gz 18971327 BLAKE2B 4f6b124ddf6c892a0be36cbdcb00fe20a15b6f7a49af3f022e31a757ebd48d95c52219ecb2d56fa7787f936dbc08853affe07250ddf5461aff2f7fa5a9742be7 SHA512 2681a4394cc250d1ee545cd85dc962d73b1dbbdd987790a029bf51a58e74cbb08b5c8cf4a02b9b7c95916e3fb0d1613e2ed8631bb7ad683156759421081bb4ca
+DIST ncbi-blast-2.6.0+-src.tar.gz 20025526 BLAKE2B d97d1245e3f2030025e99323d67d889e6cecaa719fe525dbe1574a916e5f8b7b620880d44efe51851d64b9d1cdd0538f13161bfea8e233dcca6a223548d5090d SHA512 ea6444892a0b10459193d33d243b5960ad206b702e01e94a554a5ebda0291ff45e1ce43479713c23a96eba676b40bb8c57a7ef9dd2118729feef6b2cd98560c6
diff --git a/sci-biology/ncbi-genome-download/Manifest b/sci-biology/ncbi-genome-download/Manifest
index 7c41e4f19..93f87bdd3 100644
--- a/sci-biology/ncbi-genome-download/Manifest
+++ b/sci-biology/ncbi-genome-download/Manifest
@@ -1 +1 @@
-DIST ncbi-genome-download-0.2.2.tar.gz 17601 SHA256 953d635b6f6e240d0c310e80f732877200074d178b1cdb2d06b363291fa431ed SHA512 da5ccc00d02db272b647e89f27caea1c396776b3a548882bb04b7385cece6105abcc8bb15cfed07a155d59d9442cb8e925697f814ada78a5c68be2ca042e186f WHIRLPOOL 4c434ecaa7c2af47240dc0b84b1fec7e8a7a304783b715125e70fa9f36ce54624089678bf154c5b0a3b207ff81e11c5b6391a758b92f74c5dd949c11d348aef7
+DIST ncbi-genome-download-0.2.2.tar.gz 17601 BLAKE2B fd3b132d67d6e81429b2d6f1078a588ed2efb71d847bd5ca6cc5b934cf136b18d93e2afa25393f8c4e296ea7f8c13e7bf0c95700480f899fbbbc377863896594 SHA512 da5ccc00d02db272b647e89f27caea1c396776b3a548882bb04b7385cece6105abcc8bb15cfed07a155d59d9442cb8e925697f814ada78a5c68be2ca042e186f
diff --git a/sci-biology/ncbi-tools++/Manifest b/sci-biology/ncbi-tools++/Manifest
index 45ec3d523..0bf4ddb07 100644
--- a/sci-biology/ncbi-tools++/Manifest
+++ b/sci-biology/ncbi-tools++/Manifest
@@ -1,2 +1,2 @@
-DIST ncbi_cxx--12_0_0.tar.gz 37925914 SHA256 432d5c72cc02dad263f1b2f1ab875e04e60b1ded0c5537ed54e8095b50554d20 SHA512 1a79f2d95960efde6263289814102499460ec235dad36337dd398d668665e44015e06e40fd0e66a8fb16f526d326949adcaadcb667debeba5d8570b1a92e30ed WHIRLPOOL 16f0b6de7e0d898bca7a2a46a64a4aa0795f99673d4715a21cca2dc5aa728143b56f02ad9c108543195a8f86f4267777d2be9428dcf52f5495083a63961ad867
-DIST ncbi_cxx--18_0_0.tar.gz 69807228 SHA256 f9c47db64e5e31fcb8fdebb165c3eb895cb1668e419f4b917414aadf70f1bdf5 SHA512 70dd07597aafa3f48881640530bf2aeebcac6fa13843fada4c590ca101cb8fdfa1aabf240ed0177d371a1fc36c6d231d667125279096006cd1eba119ea9514f5 WHIRLPOOL f5caf3cfd3e31acb38c22d5be9616763f713d6a0aa02386434068c995d3a0ac2df458b1be9c39d733f9465e2acda348189ee1f7299e35d0634a8a39a17f19384
+DIST ncbi_cxx--12_0_0.tar.gz 37925914 BLAKE2B 45490961293d8b3ace24c21602f4039041003f9b45d9f1763957c97ba1e55d6d336c33b6116262b2e774cc26b9366cc3d61bead0c0c7fbd4c461cad2921d80d4 SHA512 1a79f2d95960efde6263289814102499460ec235dad36337dd398d668665e44015e06e40fd0e66a8fb16f526d326949adcaadcb667debeba5d8570b1a92e30ed
+DIST ncbi_cxx--18_0_0.tar.gz 69807228 BLAKE2B 2221232e4ab38845708a9ec5601a94f1dd25c5dd6fff265bde3c3d64b9108eec00b8480a1888d2517881f25abe9127e547ba88528b95398480ecd09d133482a7 SHA512 70dd07597aafa3f48881640530bf2aeebcac6fa13843fada4c590ca101cb8fdfa1aabf240ed0177d371a1fc36c6d231d667125279096006cd1eba119ea9514f5
diff --git a/sci-biology/nesoni/Manifest b/sci-biology/nesoni/Manifest
index d71d2e1b6..1b00acdce 100644
--- a/sci-biology/nesoni/Manifest
+++ b/sci-biology/nesoni/Manifest
@@ -1 +1 @@
-DIST nesoni-0.128.tar.gz 252773 SHA256 215215d7d5ef4fc72e13e44b48e86070a2c7293e6730ef911467af9f4c801385 SHA512 8df36b11b0371c5895d690b7497a298a34154f7c14f05d340f9fa5d6352d96e49e4a1b1e4e2089bce0a652bbc3911c8d6b361055263ffd573274b62955df0462 WHIRLPOOL 96b8ddafa3dd2287b8c4fe66c844939055d85ef567eda5b73b816ab9007b4006cfdb7ae3dbf23283e2a1682aba70c087b28843ccc7bf1231ecc90294290294d2
+DIST nesoni-0.128.tar.gz 252773 BLAKE2B 79807e456fac3b0826ec3485d3f67ad13154c5d24a8ec7807cf3fa1765edd3c467d27ff5cbd2dac77a28444b0b3802f055c091b1ff64c29ebac460189d4c9f7d SHA512 8df36b11b0371c5895d690b7497a298a34154f7c14f05d340f9fa5d6352d96e49e4a1b1e4e2089bce0a652bbc3911c8d6b361055263ffd573274b62955df0462
diff --git a/sci-biology/nilearn/Manifest b/sci-biology/nilearn/Manifest
index d12e3bc25..ad8541d5f 100644
--- a/sci-biology/nilearn/Manifest
+++ b/sci-biology/nilearn/Manifest
@@ -1,4 +1,4 @@
-DIST nilearn-0.1.4.1.tar.gz 649510 SHA256 50a1aec049ffb5691a57113aed5fa3a028add157127310b8c97e2dc4d3a9fc24 SHA512 277633d1280a69ee69452bf7c6ce3ae8a86be3165575904bdae590488d568e82804eac0a7d040fd0ff49f546adf4bd2b0899c4b3bbbfd92aedb0fc16cc10d9f7 WHIRLPOOL 64a23e2d7d1dd37361875f138be27c5d41b2014eb2d4c3ce5dfce57ea7fb59747217ca77d4f1b13e2b45f2a0f7e344bb1c22c680f60f41900e572494e3103589
-DIST nilearn-0.2.4.tar.gz 1826461 SHA256 34616600411bac997d04560e19493dbd597e68842f63b3e15e5bcdb564156bd1 SHA512 4f8f2572bedf15ab177fd88f21816f08fe32ade92389459ac38e144665f5c2e2aa6a3f01c23bdb6c3cc2d58a73432d051809982020dfc87a1f43390b086c2a9a WHIRLPOOL 3d9fbbee1ac0fb45da13d943c4fdcd89ca88475097528924e27c08a5ff8b443ce8c29fa0987325bb41782d81a42757a9bf1517e9d42e5e6c1125a8f9d2376c0d
-DIST nilearn-0.2.5.tar.gz 2660422 SHA256 6c7dad58ab85549d8489e2fe9e8f15b37278c06fe6b69f7fc33f9c1f0307aef0 SHA512 cf987f05641c8b875f9432b1cdc95aa38c0964d1e661b2542717bfe14177a6369407a12b34a2ef1e3688630104b0b7e5c164bc3529a57f35abad936edb1493b4 WHIRLPOOL b352b2e83d718c1b67067b350dc8f0091a089ade73946bf34e43eb181043ad6c033542e848c880bb59506639c752cb686b81c78eb473b23987b1324ae6673d3c
-DIST nilearn-0.2.6.tar.gz 2674241 SHA256 c6896fbed44338dcec248880c2fcd5a44d8b0f02e1a1212e2f9b5677d0d1a8ec SHA512 33de004619d018829f4dd2338ae1738a3ee4ecf188569404f1840f29cd1d30c1d24ffdaa44841ebd4656837973a80646906e24fdf01b11b2678a6c63fe0c228d WHIRLPOOL 5792d924e63b3a02ce77598248fd9fcfdfa4891fe29eb0af38642718a4fd2aaf8971aa806bd3d7af266d7ac7e45bb99f8eb22b8cb7db7d716d69bd9012241235
+DIST nilearn-0.1.4.1.tar.gz 649510 BLAKE2B aad72e3044d136d532973b8cad90560004af4e3e76d5fbaa1698b952ce85d10d0e57521bc299229ecc350dfbf2e91236d9ba03adf0dec279c6e75c1358318d1b SHA512 277633d1280a69ee69452bf7c6ce3ae8a86be3165575904bdae590488d568e82804eac0a7d040fd0ff49f546adf4bd2b0899c4b3bbbfd92aedb0fc16cc10d9f7
+DIST nilearn-0.2.4.tar.gz 1826461 BLAKE2B 26ddede5d8355089d09de7cb04c0d105839f16d7eacfd9eac8dc5e430f7b37643b827860b94e390670a4a622fb4246822b5f24d54d2b57b42a16309fa06a5928 SHA512 4f8f2572bedf15ab177fd88f21816f08fe32ade92389459ac38e144665f5c2e2aa6a3f01c23bdb6c3cc2d58a73432d051809982020dfc87a1f43390b086c2a9a
+DIST nilearn-0.2.5.tar.gz 2660422 BLAKE2B b66a0a725019afc5fa3845a74b26efff12793d22dc94723486e77db211e1b4da7b97b906911452ee021425cac187a321a4f25f9294def9cec963db0825c08447 SHA512 cf987f05641c8b875f9432b1cdc95aa38c0964d1e661b2542717bfe14177a6369407a12b34a2ef1e3688630104b0b7e5c164bc3529a57f35abad936edb1493b4
+DIST nilearn-0.2.6.tar.gz 2674241 BLAKE2B 3b6a38896e948258c9af7b624cbf809e1928b5e0e3aeb43bd67b85a19d0e51a93fd8914485fedc51f5d1cc75f4d32ec6e0a85f94a422a8d7f29437b80cb99373 SHA512 33de004619d018829f4dd2338ae1738a3ee4ecf188569404f1840f29cd1d30c1d24ffdaa44841ebd4656837973a80646906e24fdf01b11b2678a6c63fe0c228d
diff --git a/sci-biology/nitime/Manifest b/sci-biology/nitime/Manifest
index ef149bc3d..cb4790f33 100644
--- a/sci-biology/nitime/Manifest
+++ b/sci-biology/nitime/Manifest
@@ -1 +1 @@
-DIST nitime-0.6.tar.gz 6205960 SHA256 7ad41ce89fabe7298e29440a0f096f79401b1ec7a22ef9375da1ca1ef00c3adb SHA512 ab91845ad1a29fbb8bf0a442668fb54976fe21d49ecfa57ec40f1596c10baf8684fd52aa3276a58d59faea4051621327cb50d5da8239ea8605365203cc009ae6 WHIRLPOOL 821018cfc27f9a10a6e10c3dcc6a6026e24a1a1ec19762d75f88f33447a42fa961a2a4fac7f69ba00b30a995fae77b9e8da2f4db4551205c85ab8358559e3fe8
+DIST nitime-0.6.tar.gz 6205960 BLAKE2B 0ba316aea962d40f042586962420d08e3ef3b452f6431f51bd6f58c253e6c33b0af6cb3dc06ca3ba598d9c1c5c4cbc1844d0ccf3684ef2085fdc5747b70a7ff1 SHA512 ab91845ad1a29fbb8bf0a442668fb54976fe21d49ecfa57ec40f1596c10baf8684fd52aa3276a58d59faea4051621327cb50d5da8239ea8605365203cc009ae6
diff --git a/sci-biology/nrcl/Manifest b/sci-biology/nrcl/Manifest
index f2206e57e..7785a428a 100644
--- a/sci-biology/nrcl/Manifest
+++ b/sci-biology/nrcl/Manifest
@@ -1,2 +1,2 @@
-DIST gclib.tar.gz 82727 SHA256 0c7f21fc92b033cd442b672e9014e3ffb9f2de97769ca525715692ed9359439b SHA512 a6819e6dcb092c13b4f5da7eca6c82a9a46b512aeff2596cb4b921aeb8088c40bf2283be66862ab4d2195062b8126169e02945bcf4c8d4f118fa1e34bccba197 WHIRLPOOL 575ef5382cb46d4865523549d36dcb0785f0a99723b1286f9f8d247939957fc2d43951684f5a94bbf134befb8283fb7d0642f308b152cbd5d9453ef2dcfef09a
-DIST nrcl-110625.tar.gz 14782 SHA256 8795728d60416d1329a352479335b084d3627af8e6ba5e4ba043041970886f46 SHA512 794d79735870fcb4da581dafdc779a5d55ab06a953e1834d09ecc1d1b8bb03ecec2e35cf2aaa6e27320808a6bc5295ee1d35fe544afd04689af4de0d644971db WHIRLPOOL 87033fe2455157db1872921d134ba8bdfcab6edd38cb4e566b4a7dfffc811076ceb977559949366df0dfc4faefc60b53ee99f70d03ea9c45de2c0fc85a0d80e7
+DIST gclib.tar.gz 82727 BLAKE2B b99a89d39ed76c643a9e379cb7294c63ec0d186a106c331f6ff4df6a40fcc5585f81e4c9d6015af434e2a75ea46e0e3783dda627abae32276ce9204c719bef2f SHA512 a6819e6dcb092c13b4f5da7eca6c82a9a46b512aeff2596cb4b921aeb8088c40bf2283be66862ab4d2195062b8126169e02945bcf4c8d4f118fa1e34bccba197
+DIST nrcl-110625.tar.gz 14782 BLAKE2B 68f724260b8a85acd8412ed326fee0e4053fd1d73e82880a479d801831acfbf930f6d9e9230d567579e856524d952fc77c69fe8ee353254f411253183e78466a SHA512 794d79735870fcb4da581dafdc779a5d55ab06a953e1834d09ecc1d1b8bb03ecec2e35cf2aaa6e27320808a6bc5295ee1d35fe544afd04689af4de0d644971db
diff --git a/sci-biology/nwalign/Manifest b/sci-biology/nwalign/Manifest
index ddbf21f7a..9b1fa975e 100644
--- a/sci-biology/nwalign/Manifest
+++ b/sci-biology/nwalign/Manifest
@@ -1 +1 @@
-DIST nwalign-0.3.1.tar.gz 50228 SHA256 bdbf1948df8421ef744ebf2993341df1f8431bbe41f4ce31241fff88d4d8e781 SHA512 78e98743a016cc247831364eb9f44b320592013aaeed001db86ef560df4824e5872a722a780511dfec6970007d84483512f54e52ccc444fdd08e8854de46b1da WHIRLPOOL fea3191128e937976f14121d31701ca851c791659823f054ad48950abdf37908015d9bdb5cd8a2c00c0ac2227e2327e56afa3ab04d5511e6a6418d94415eea09
+DIST nwalign-0.3.1.tar.gz 50228 BLAKE2B 7791acfdc846b2048ae7d7f52c3ce763c53e878871deee00e3da5e1aa027c12d253c61d799981ffb9b3359bb6132ec110360992df61985582fbcdc90b60ddf17 SHA512 78e98743a016cc247831364eb9f44b320592013aaeed001db86ef560df4824e5872a722a780511dfec6970007d84483512f54e52ccc444fdd08e8854de46b1da
diff --git a/sci-biology/oases/Manifest b/sci-biology/oases/Manifest
index 27bb408c0..031a5ff34 100644
--- a/sci-biology/oases/Manifest
+++ b/sci-biology/oases/Manifest
@@ -1,2 +1,2 @@
-DIST OasesManual.pdf 113886 SHA256 e894e68ba5aaffa8cdcfcd56ed7411a352dae36e49e61d71c92408d9c57532b9 SHA512 c710a62cd1982060f723918f5f4de91adff12870d1682d0729035a3588ed37d26898c399c07b1b81b4b399c7ea1a14509784a6dbb9de6004bcadf6677cd5859f WHIRLPOOL b1146f6d0390ee6f03b08f1bd5df4ed6eb667d1d81431a16f3b2e9f8511a77a9187ada34b618903d97951faa55e1f0c687eca87058d78b3b0f02148f711171da
-DIST oases_0.2.08.tgz 92037 SHA256 a90d469bd19d355edf6193dcf321f77216389d2831a849d4c151c1c0c771ab36 SHA512 e9a73a9227ce13995fcac7f456534a650099d8160d48d2d9831f3f05e482353c29dd76bbc74b0b451154eb5061ddb473649d21442941360f0e8c7623f6fe586c WHIRLPOOL dbb832c02b38a97b5a99134f8995ed47393900459d2fb6e2895fe823fe211d7d450800aa80d5d37ed2ff9b26641216b6ccb82c3faa5bea068adac935ddd33856
+DIST OasesManual.pdf 113886 BLAKE2B aa8492887cea64e67966238e620b24aa5f90a8622a6de9bc4d4e1f56554f624c9ae7a19e0c46d83478849ec5d2ecb758fd8e253d8327d4d2bdcdda9db2e114a7 SHA512 c710a62cd1982060f723918f5f4de91adff12870d1682d0729035a3588ed37d26898c399c07b1b81b4b399c7ea1a14509784a6dbb9de6004bcadf6677cd5859f
+DIST oases_0.2.08.tgz 92037 BLAKE2B ff9762264d18c42e20b2208a057b073a2a960dab1ca17372db2fbf6f09094d3446ccd29a6038e17ee59b5adee9afe23cd59bbc4b640f57ce04141d2990b32b90 SHA512 e9a73a9227ce13995fcac7f456534a650099d8160d48d2d9831f3f05e482353c29dd76bbc74b0b451154eb5061ddb473649d21442941360f0e8c7623f6fe586c
diff --git a/sci-biology/pairagon/Manifest b/sci-biology/pairagon/Manifest
index 3c7bc9b31..4bba90f2c 100644
--- a/sci-biology/pairagon/Manifest
+++ b/sci-biology/pairagon/Manifest
@@ -1 +1 @@
-DIST pairagon_.tar 1198080 SHA256 c84ae663ac39e7aad10bd524115da3f89503583e8579066843b4db0aeaa6cf9c SHA512 1043c4cb66bd361cb9c0bf866706c480f2a5098b7d655117f6ee349e2256a86cc4362bda16d8f7f4d1ef0486709d82d06403d990f29402eae7b8eea28fdbc643 WHIRLPOOL 312e77494d464c29e5381ed6c6ba689564006799bbc436b86931a63d1263e1eb01667f118c8ea28030646b862256aa905db1d40926191dcdc8734755e61107a7
+DIST pairagon_.tar 1198080 BLAKE2B 30ca5e84de667ccb303d4135a4ed7209078bdf5ee9bab2a3b8b5cfa2aa7ca43a9bba7a78154d7cdf826a96772704d9f69462e96ee8b404d687e32a467267971b SHA512 1043c4cb66bd361cb9c0bf866706c480f2a5098b7d655117f6ee349e2256a86cc4362bda16d8f7f4d1ef0486709d82d06403d990f29402eae7b8eea28fdbc643
diff --git a/sci-biology/parafly/Manifest b/sci-biology/parafly/Manifest
index 7f4aa956c..b70d01fe5 100644
--- a/sci-biology/parafly/Manifest
+++ b/sci-biology/parafly/Manifest
@@ -1 +1 @@
-DIST TransDecoder_r20140704.tar.gz 21189681 SHA256 fb53c9601c4ae9b3cd8e937f158ae3f15439115609bc7658effffa24af53517e SHA512 fa70e440c3f8b8d11da780858ff6433adf9065b126b29eb047983b17913e382c677a272881ee78be8e30867bbd447eb9bda71bd11abda5203d6a3abfb5316e90 WHIRLPOOL d603d06c8c1e84f3e721c0f5e43b2519766eaae1fc0456ece07ff43c13971706aecb24473813b7606ca885d2ef526648fc28f874200a53037b4aa6b291c4864d
+DIST TransDecoder_r20140704.tar.gz 21189681 BLAKE2B 9d6602cb9ef9f05dcfbc7f04aa07c0fad067d04af454f9d6a31baeb62e883cf9eb20a29ea0cc5505968c05143738c308fca7bfda00f689d7639f88c2baa02a1c SHA512 fa70e440c3f8b8d11da780858ff6433adf9065b126b29eb047983b17913e382c677a272881ee78be8e30867bbd447eb9bda71bd11abda5203d6a3abfb5316e90
diff --git a/sci-biology/pb-jelly/Manifest b/sci-biology/pb-jelly/Manifest
index 142cee0a9..44cad9c3e 100644
--- a/sci-biology/pb-jelly/Manifest
+++ b/sci-biology/pb-jelly/Manifest
@@ -1 +1 @@
-DIST pb-jelly-14.9.9.tgz 2571636 SHA256 862d98a659bc2ec41cd4341f0ab7dc1f04af1f2ffd05fc0dedfb6562138de86f SHA512 2cc578f6e01d2a3b59ada049ad9967204bc91e7e56b53517b9aef07d6163e5cea5c30b5d83b42ad86e45f80a0a9b67282c2a6af417374270b9e395a3e1e70dc4 WHIRLPOOL e2839cd3f80e6b5354c0879941e42deb7a34edc668826c0b0cbce6b782c0c90829db16db75542078836ec5dcd49e94acedf71d849b005f441192de7e692e7865
+DIST pb-jelly-14.9.9.tgz 2571636 BLAKE2B e857251b293a662ca309e16d396ff0c96750ecc921e439cfabf4e4cbd5233a64f86f571ed34fd0ed1d33ee697b5547eb8adea03c73e50ff2a4058600bc327313 SHA512 2cc578f6e01d2a3b59ada049ad9967204bc91e7e56b53517b9aef07d6163e5cea5c30b5d83b42ad86e45f80a0a9b67282c2a6af417374270b9e395a3e1e70dc4
diff --git a/sci-biology/perlprimer/Manifest b/sci-biology/perlprimer/Manifest
index bcc0534c4..6f0304b4f 100644
--- a/sci-biology/perlprimer/Manifest
+++ b/sci-biology/perlprimer/Manifest
@@ -1 +1 @@
-DIST perlprimer-1.1.21.tar.bz2 356704 SHA256 19fe2202c18ad65a05d7b90ef642103e9db8e6993fe76d87c7c7cc3586e4fd20 SHA512 1dde619ad60c38454c29ff735d8765692319004d2de3de3e0ff2ded409c37151f326be93fd3283d9d9a5dcfd284c563c0a0fd16006fdd5dbcd9f4dbc355290c5 WHIRLPOOL 57f10b71767b4534744d367d0240f7eadbb38e0eeaaeec4574091e7aa3d924a1bda74f504177cec832067f1e24168390265c51a497ca1f61fb4ac4d285b359ec
+DIST perlprimer-1.1.21.tar.bz2 356704 BLAKE2B 0175f4657dc2febfff0b0c62e19e5407ed9c35f782aef4d6d5c3de8a9bc7e7276205aca867dad7c48820ae0b8bf30a144b11d308d6e29d3bdb0cd7dc1101cc5e SHA512 1dde619ad60c38454c29ff735d8765692319004d2de3de3e0ff2ded409c37151f326be93fd3283d9d9a5dcfd284c563c0a0fd16006fdd5dbcd9f4dbc355290c5
diff --git a/sci-biology/phusion/Manifest b/sci-biology/phusion/Manifest
index ded1cc97c..9bfe37e62 100644
--- a/sci-biology/phusion/Manifest
+++ b/sci-biology/phusion/Manifest
@@ -1 +1 @@
-DIST phusion_pipeline_v2.1c.tar.gz 12029104 SHA256 d6cd98d9194faf91c3b497c569529f0b0af8b2fa7bf083d24a5c946fd2804457 SHA512 b5ed5b2b893fa3d4cdbb6ae96acf515894b1df65ba2536f3a47829f383eca1e157f1b7b117e0d1bf0f763328e8bc2ffddac9a570dbec757c057040c3fb66a765 WHIRLPOOL 76d21eb6ab558395ac7b18043b4e4e31d1b2a6f02779f09fcbc2e2591a304738af5ab9abe042d3a982f73fd04cf32c1125d8798f3e04ab6fb67fcaa7c2b6e642
+DIST phusion_pipeline_v2.1c.tar.gz 12029104 BLAKE2B 75cb94be34815d78d404e67630767640306bab958bf5f214a8d12d0c0ea9ee4ac12ab9b84277b3fa2e4ab1b968e645606ac1dcdea6a780210398b2d5e03d4afa SHA512 b5ed5b2b893fa3d4cdbb6ae96acf515894b1df65ba2536f3a47829f383eca1e157f1b7b117e0d1bf0f763328e8bc2ffddac9a570dbec757c057040c3fb66a765
diff --git a/sci-biology/phusion2/Manifest b/sci-biology/phusion2/Manifest
index 66f404645..fce8afa2a 100644
--- a/sci-biology/phusion2/Manifest
+++ b/sci-biology/phusion2/Manifest
@@ -1 +1 @@
-DIST phusion2-3.0.tar.gz 136875 SHA256 f41b3e1c33821d65f29d25d87dd653d84f7b444415e684759d5b657874f7dbe2 SHA512 a29e4102806d404a7bc78c1611d702f9c6415bc04ca518416632bf8d9d3e570324add907c43e627f645a5281b807ccf169908637121f66883c4e878080345eca WHIRLPOOL bda9041967bf23881f41b881491df84432ce596bb3f9fdb71820e246e69fe2ab10b1c2804dcccb6e067a125ec57e41068f418ea9bf0c106ec3cc0e3b62b98aa5
+DIST phusion2-3.0.tar.gz 136875 BLAKE2B 8338df1865ac8f684ba3a2a2fc15520fe167a1ace02e8f64db17f6acf07ea8cde2da18fd6f18a958e53b00dd02e7e8138305e2a762a84c6bf8d7cfbd2cb9b999 SHA512 a29e4102806d404a7bc78c1611d702f9c6415bc04ca518416632bf8d9d3e570324add907c43e627f645a5281b807ccf169908637121f66883c4e878080345eca
diff --git a/sci-biology/pileup/Manifest b/sci-biology/pileup/Manifest
index ec5a6e4e1..84c8730b9 100644
--- a/sci-biology/pileup/Manifest
+++ b/sci-biology/pileup/Manifest
@@ -1 +1 @@
-DIST pileup.tgz 685778 SHA256 ebcdbdc8af23c3107f4930d9b7b699ee0a08005d6925b22108f0f0d094b94ae6 SHA512 d65a3bc3bc43f17c74033808ea4d536d3ca46b971101275240261bd0f97c54855566e7254d8244501427f1dbab9f1cef5cd7c853a00d253aad2a0dbdab1488ab WHIRLPOOL 04235ad1a5e614eb5bad006d87c029e0ecbad5ee50b835411ec8750fe9bb90332be7510ae6a79a9ae9498f1cd8376619596758c3912d041a540e045ae078d333
+DIST pileup.tgz 685778 BLAKE2B edc1de01855fc1617be96a54aca505d83f967b77ca5326137da80cc0c4a570da8b98f101d47484108c0c3ee06e1a340c408b20facd99c2b9fa00a9c615e47663 SHA512 d65a3bc3bc43f17c74033808ea4d536d3ca46b971101275240261bd0f97c54855566e7254d8244501427f1dbab9f1cef5cd7c853a00d253aad2a0dbdab1488ab
diff --git a/sci-biology/plinkseq/Manifest b/sci-biology/plinkseq/Manifest
index 36abf40f7..fdf7b1f9d 100644
--- a/sci-biology/plinkseq/Manifest
+++ b/sci-biology/plinkseq/Manifest
@@ -1 +1 @@
-DIST plinkseq-0.10.tgz 6090698 SHA256 e9d4705acf8b22eddba0c48cf502e3bd4236f3b60b010f39f94deecf37e94b58 SHA512 b8fa0a0b42a5f67612b1549d1f2fbed67333abb57ef024d4be683cd326e53a8ef08c6c0acae8ed3195fad619c8aea9005e315f937d76cd990a7ffff1d808af41 WHIRLPOOL 4e2df6ea70da185c57fe9fd87c536d54c90e932a5ea8956c8294ea643de2cddaae24f69b4eeaef1f9c8931c8e5e43a14ebf56897e223b963c4c8a2ffbeda83bd
+DIST plinkseq-0.10.tgz 6090698 BLAKE2B 86ddc1952c742f024fefdd8e3dec7af73bbe1be3231dc9a795650f3470b9b641ce86f6fa8157f6090943bf6cb53eb262204e2d4872b5cad14fa078b3cf27c514 SHA512 b8fa0a0b42a5f67612b1549d1f2fbed67333abb57ef024d4be683cd326e53a8ef08c6c0acae8ed3195fad619c8aea9005e315f937d76cd990a7ffff1d808af41
diff --git a/sci-biology/poretools/Manifest b/sci-biology/poretools/Manifest
index 40c931d9a..eb69d6213 100644
--- a/sci-biology/poretools/Manifest
+++ b/sci-biology/poretools/Manifest
@@ -1 +1 @@
-DIST poretools-0.6.0.tar.gz 68959206 SHA256 64d22ac045bf4b424bd709abb07fcdb6ef4d198a76213183de166a307646b9fa SHA512 4d624c498199a8d968b6b379053c62f569e8278649c1ac944fbf6a83b198289e1e0dd89700daf54d7ad397dbe87a9819bec8852bb63feec69116985755427181 WHIRLPOOL 0070948c45cfedf86eb27b7e4c1b9f8abac522684b46fe52ea22888021c16697b75f8cddc93882e24b500625860adcca192dda1a3b3459968b6cb41fd4e10858
+DIST poretools-0.6.0.tar.gz 68959206 BLAKE2B f1a7259b141d1e6d7b3052a5b451967b71c755abd2ba694f3af4e949a8a4bdce92277deb85b657bca8a9942f675cb58005db77dc28b208c977627b25793a4ef8 SHA512 4d624c498199a8d968b6b379053c62f569e8278649c1ac944fbf6a83b198289e1e0dd89700daf54d7ad397dbe87a9819bec8852bb63feec69116985755427181
diff --git a/sci-biology/portrait/Manifest b/sci-biology/portrait/Manifest
index e7dd308d3..e89dc573b 100644
--- a/sci-biology/portrait/Manifest
+++ b/sci-biology/portrait/Manifest
@@ -1 +1 @@
-DIST portrait.tar.gz 12102665 SHA256 139b1508bcbba2306f27dfe61a6fe8b24699ca04aed60dc88fef638a4527689a SHA512 724abe0f7afbca22ee422095498033501e136530db51314f28538a72734e7b591fda4f557ecb47781f2b7408fb35586a33c9a214ad40e23bcc8912cdc16bbb1f WHIRLPOOL 215bce3fa6dcc3aff3d6ee3fd6b77b16ac6a360182979977d5608a401c5bb26c54d5d685712108160ed387ea94e60414dbf6623410560ebdc6e56e61741ebf1f
+DIST portrait.tar.gz 12102665 BLAKE2B 9e270e9d78df541342582188794d1df1e3e7fe7da6e8262a898abc31e5bd70a2e8dbdd42da460653cf909a4ae22207f5885a5ff89350bac8cc623e37a9752cba SHA512 724abe0f7afbca22ee422095498033501e136530db51314f28538a72734e7b591fda4f557ecb47781f2b7408fb35586a33c9a214ad40e23bcc8912cdc16bbb1f
diff --git a/sci-biology/primerD/Manifest b/sci-biology/primerD/Manifest
index b7972d100..c63bc73c2 100644
--- a/sci-biology/primerD/Manifest
+++ b/sci-biology/primerD/Manifest
@@ -1 +1 @@
-DIST primerD-1.0.tar.gz 58132 SHA256 5fd994a463236c4d4d1d19c5ba2608e59f4f1b26cb9d09b3dac42c1ad3c33220 SHA512 9f70ccb2a8304fe9e3a3885f2607969ca00483c1f3bb70ea3b5da709db0c43979cdd6bbf2b9ef805c13d215000afab2053fdeda66dc48006cb50f536886b86b2 WHIRLPOOL 02f852edc61b68ca505b89b9b48db0314e6f73fe481afd53cb27088677de754f735d0230ffa228f83e2659dece202e643c15d3f930a95b6742c29c6c5f3793d6
+DIST primerD-1.0.tar.gz 58132 BLAKE2B 4fdf1126649ba3bddb92852dacd14a4e4bf652715166f7c6d9ba23aa3ebe8ab7419cf939131e6bde09190c65e5ed04222172757ff642d7af9eb34bfadd9875eb SHA512 9f70ccb2a8304fe9e3a3885f2607969ca00483c1f3bb70ea3b5da709db0c43979cdd6bbf2b9ef805c13d215000afab2053fdeda66dc48006cb50f536886b86b2
diff --git a/sci-biology/prinseq-lite/Manifest b/sci-biology/prinseq-lite/Manifest
index 2565d2a25..72403c4c1 100644
--- a/sci-biology/prinseq-lite/Manifest
+++ b/sci-biology/prinseq-lite/Manifest
@@ -1 +1 @@
-DIST prinseq-lite-0.20.4.tar.gz 494859 SHA256 9b5e0dce3b7f02f09e1cc7e8a2dd77c0b133e5e35529d570ee901f53ebfeb56f SHA512 f0f920de72e52cf94e22a12631e9a90fc926ceba93139d29772f6e0f60737a96b38af56adfc38f242d18d360bcd0ac4fadaa444414d17601eb281baab4b0e9b2 WHIRLPOOL cfbdecc8f0fe7f63a27178e119933781295765c503f4691fed438b059acfcb7f84a0e8d1aff611266f6adde28bd06e3acd37f2b064a4fa1e94e636484e4d6356
+DIST prinseq-lite-0.20.4.tar.gz 494859 BLAKE2B 1c96b360980c161e2cbee3a44faba1e9df0d6d8dedc9d241cd253d4a7a8c1dea6680239544e7cf79dd21898847e62f219981f38ba3a002893dcfbc6742ee637e SHA512 f0f920de72e52cf94e22a12631e9a90fc926ceba93139d29772f6e0f60737a96b38af56adfc38f242d18d360bcd0ac4fadaa444414d17601eb281baab4b0e9b2
diff --git a/sci-biology/proda/Manifest b/sci-biology/proda/Manifest
index 805d0fc3c..fc269298b 100644
--- a/sci-biology/proda/Manifest
+++ b/sci-biology/proda/Manifest
@@ -1 +1 @@
-DIST proda_1_0.tar.gz 38868 SHA256 439a93bf35e1a29ac1d5dde51e61f2cb174618596afaaaaa27d33a8ea1868a08 SHA512 e94f16fcc805a8db80611d0a5b2c907ac58337e7e7295b3913260ca9709a957c1ec86323f40241db14d72b26475afa01e8a95fa69546859c3c9a52cc746fb447 WHIRLPOOL 6460842dc8418a1a42d9d546ece5c4e8634475e425ea2cbd5451ddb6488e8f16320196d130c2959a7013389eee636da63d4eb58a1627d8a0cd987f6f05503bf9
+DIST proda_1_0.tar.gz 38868 BLAKE2B 7fdb9e10664b8159b51297ffa8c8f308017f24ad1c5db32d895617a9ba0aa1f33bc2af0c209eec99e90e47fcb2267afdaebcc7e3ccf4971be98d7adc3e9150c8 SHA512 e94f16fcc805a8db80611d0a5b2c907ac58337e7e7295b3913260ca9709a957c1ec86323f40241db14d72b26475afa01e8a95fa69546859c3c9a52cc746fb447
diff --git a/sci-biology/prokka/Manifest b/sci-biology/prokka/Manifest
index 0ce314c87..0e683ece1 100644
--- a/sci-biology/prokka/Manifest
+++ b/sci-biology/prokka/Manifest
@@ -1 +1 @@
-DIST prokka-1.11.tar.gz 359226217 SHA256 ee18146c768fe6ac8e6c9e28bb35f686a5b79d5d5362c4b7665f6a33978101ae SHA512 7b35d340ca07685886ff9ef97f0d40a28f05bc378a407a0349b06c8be9df005c4030b205a93985ec691fac4b6442a607f8723f3ca8f2066704f15b8667476034 WHIRLPOOL 075807739662e9a8c450f1706923ba2bd230b50dd342524e4d54de29e08ad526934c16271715451f2cc1766a5e79efdf614a902c8cc9830bc24ef287dafaa839
+DIST prokka-1.11.tar.gz 359226217 BLAKE2B 233c5234b839c0c18f03dcded2f89f2ad0bf8ccaceec1387fd6e5c9add4ab71698220031ed1d6cf6b38425bae924cd774fce5f622ea5e3fb01bf03fb30134692 SHA512 7b35d340ca07685886ff9ef97f0d40a28f05bc378a407a0349b06c8be9df005c4030b205a93985ec691fac4b6442a607f8723f3ca8f2066704f15b8667476034
diff --git a/sci-biology/prot4EST/Manifest b/sci-biology/prot4EST/Manifest
index 001d04738..b010efd0e 100644
--- a/sci-biology/prot4EST/Manifest
+++ b/sci-biology/prot4EST/Manifest
@@ -1 +1 @@
-DIST prot4EST_rl3.1b.tgz 21869514 SHA256 d1d9a4446fa9cdf6d7b44287db59517fa7008a6027a9e8d9e5ee38c926d8b231 SHA512 0768d36066c9d0f88ce53100ffaf71cdb27bb75ab2e36cc0f5950ac5995292bb31c3226033b17acbaf43f002474df4ddafed7bc2cf4e454bcd3282e85656ff78 WHIRLPOOL d40775ab843d3b18ef47f7f14cccef0ba924746971869ecbc2e07e4a0ff2722d335707a5dc38d998c1e9c521519b7193fad006331d8ffc72f35a25aa938e077e
+DIST prot4EST_rl3.1b.tgz 21869514 BLAKE2B eeafdd97482ff397c54d85195069471756b7dca685c9e066038aa78fbd76a84a907e2b0b16b4912c445644aedf2bea7117eb4ebd857a644c337154bdbfb8bf98 SHA512 0768d36066c9d0f88ce53100ffaf71cdb27bb75ab2e36cc0f5950ac5995292bb31c3226033b17acbaf43f002474df4ddafed7bc2cf4e454bcd3282e85656ff78
diff --git a/sci-biology/psx/Manifest b/sci-biology/psx/Manifest
index 5b15a8062..f60969934 100644
--- a/sci-biology/psx/Manifest
+++ b/sci-biology/psx/Manifest
@@ -1 +1 @@
-DIST psx.tar.gz 7797 SHA256 6759f1001be93fcfca9cebd0c764088c4942f2d7feee100d10cf2fbb39e4cd5a SHA512 3a5adc6bf73cb8c2090d2c579171508058e097dabb5565ba27be221181e5298a66c1e58980549dfd84daadf2439205954e85aebf32862f48cf048463560b64f4 WHIRLPOOL f2082506cc110a940b59a0d9547b76a2010b7100d61c6c75378ed380379282e92e47e05654c2983c034e4d85428251714354f3a2d85beb9c54c80be600929438
+DIST psx.tar.gz 7797 BLAKE2B db6d67b8e68b98f6e01c7a10bd1d5e11c6b67f82bb454bb25b9c2a44e2698a7ff535fd6a4306895a869456e8e5883b6d33977966ded02d80e38419a009ed654e SHA512 3a5adc6bf73cb8c2090d2c579171508058e097dabb5565ba27be221181e5298a66c1e58980549dfd84daadf2439205954e85aebf32862f48cf048463560b64f4
diff --git a/sci-biology/psychopy/Manifest b/sci-biology/psychopy/Manifest
index 481e85f6c..a856f1c06 100644
--- a/sci-biology/psychopy/Manifest
+++ b/sci-biology/psychopy/Manifest
@@ -1,3 +1,3 @@
-DIST psychopy-1.84.0.tar.gz 15370622 SHA256 98c670fc35e26df6c0b7a0ca784d313b4d2a552477547390d5022316a95777a9 SHA512 24199ad0d680e7dbafa9328510d5cf405c5fd664767e7f9e5e497f8fd87a7ce7bd3fcf80cf9f833884e9adcf5cf5c3c0b654994bfcfe8148b987a475133235c6 WHIRLPOOL 03fe04510b0b461f32c763f99c83f2f05638e9f1f722508ea4753193c190b2abbbc94e371e0752b95dac9662496b8da3609e3fb758f86fb6ff99d98c2d41abab
-DIST psychopy-1.84.1.tar.gz 15371195 SHA256 5dd6c25e71b1508e00ca5bdf4686d0683241f9b8f66cfd8fb46879a1f847f36e SHA512 1d9f114c89e10c8ea6d080e2d0245e7ee505301eb3f9326f03f118f12898c441b1afecd46455e206d35218b122db5411b901356ff8fb1e0d568ed2318b7bd961 WHIRLPOOL 3d57d9b9fa4f9c2c23abcf31110bde583eafa2e5a5045f9a733470de905690e10a284a1f82652eae1760fbc74d8f78f3b9a5ddf8b8d60b2173f13945a35059ac
-DIST psychopy-1.84.2.tar.gz 15373437 SHA256 01601b20bad903963543a069ce798d281190d598a39cfa6d603dbd4ff0f285b6 SHA512 edc74507c60e3d3fe98bdca85bc2010e945d500df819a067024141fa5d19f5a42e5bac81bf61d0f237d8e8783b2b5686346ade4de3066378248bfd9496fe5b17 WHIRLPOOL ae710abbb40c849459a507054f86608904961140ba12400afe8029af1e83be8da1e006923f59cee36f5bfa2a05adaea6079b37cd46d3df7354aa9efbc0172cd7
+DIST psychopy-1.84.0.tar.gz 15370622 BLAKE2B 33da59a906437e2d6507076fa329e90a22a2ee55df66c79a3b0b62a92bebacb91d38bab2025d4f64d3283b6684c8b3ebfd249f9f92fc4e0b5f99d3d01fa58179 SHA512 24199ad0d680e7dbafa9328510d5cf405c5fd664767e7f9e5e497f8fd87a7ce7bd3fcf80cf9f833884e9adcf5cf5c3c0b654994bfcfe8148b987a475133235c6
+DIST psychopy-1.84.1.tar.gz 15371195 BLAKE2B 08428183c508c07bfed88063f845afcc2e3b8109094838e20db92d1e491de4e765c3210d751cafbb496ffc97a920be8831f7373503ad290854172d50190fa808 SHA512 1d9f114c89e10c8ea6d080e2d0245e7ee505301eb3f9326f03f118f12898c441b1afecd46455e206d35218b122db5411b901356ff8fb1e0d568ed2318b7bd961
+DIST psychopy-1.84.2.tar.gz 15373437 BLAKE2B 213cbb533a223ab82688f778f2f21fafd9a78f727ec0e5d48bbd7085cb6a12c0eb0fe0ee1e738df38a806999ad2353ba5b140e3e08f02c3e650a070266df1a5f SHA512 edc74507c60e3d3fe98bdca85bc2010e945d500df819a067024141fa5d19f5a42e5bac81bf61d0f237d8e8783b2b5686346ade4de3066378248bfd9496fe5b17
diff --git a/sci-biology/pvmsx/Manifest b/sci-biology/pvmsx/Manifest
index 50d661108..e9dcc9384 100644
--- a/sci-biology/pvmsx/Manifest
+++ b/sci-biology/pvmsx/Manifest
@@ -1,2 +1,2 @@
-DIST cdbfasta.tar.gz 59735 SHA256 68767e8b2fb9de5a6d68ee16df73293f65e02f05cf2f747a9dd6b8854766722c SHA512 500b3cdf4bf4e21c78a285739c6544e3f2bed377f8e3858c8ace240a9107d765c89cff8004ca2ea001860abc04fc48bc37c03569da5b16115f4419f5fd9bcd5e WHIRLPOOL 3c5beff7ea7d7c6dd6f71755cbb5ea4fabc2ee16aa8d6711906b1a092668cfb889ba56605117133b7e32ab50d6a4986e454f94e32bcd57a5508f1f93788a9dec
-DIST pvmsx.tar.gz 10963 SHA256 c403534a0d13c2457a50c8ff5e9aeb5979d91a56307478b6420b5caf40e62230
+DIST cdbfasta.tar.gz 59735 BLAKE2B 69107a42e1b8069a70de9333891e050785cabaf6457245b4512c3725dc576ebfba54c43c3d1e356948061cf903a89a8aa0f011efbf36a4cda6b40a623f7019fe SHA512 500b3cdf4bf4e21c78a285739c6544e3f2bed377f8e3858c8ace240a9107d765c89cff8004ca2ea001860abc04fc48bc37c03569da5b16115f4419f5fd9bcd5e
+DIST pvmsx.tar.gz 10963 BLAKE2B 0ff27593754534e670b442270e4796f79570de44e9a7200b301ee60ab71bb9ce20dd7f8154d9ee7a6af1cf3540488f48eea0ed96d7471c7c7ee3f85842a5a056 SHA512 065bc0047e76e1fc4d7b368c53e285d312798fdb283b06aa689a4be593cebaa8086126bf996faefb9d582418603c8379eaf4f7551289e35bf33b2916fc79bb7c
diff --git a/sci-biology/pybedtools/Manifest b/sci-biology/pybedtools/Manifest
index fe26335b1..60c219413 100644
--- a/sci-biology/pybedtools/Manifest
+++ b/sci-biology/pybedtools/Manifest
@@ -1 +1 @@
-DIST pybedtools-0.6.9.tar.gz 18738115 SHA256 2639e80917999e76572017fd93757e8d7ceb384f0b92647ccfdd23a0d60def7c SHA512 64d54145899db947499b706310941980c75b515cb8d88f67708153b625d782e62021826b9615dd4fe225f4435d9c9d4aa8583538109308625f703883599aeb79 WHIRLPOOL e3dcc61f3c395068929c69f8419891aa792e3725b7709527cb471677d15f81c91ba3f56a385063324f475600aef7d54992a1ca1911e4210f7005b344dd63ce84
+DIST pybedtools-0.6.9.tar.gz 18738115 BLAKE2B 81f9057129d65b92106b254b9ae6c74d59e359a28847af45e26d25090d8787003038cc93db552d6b9ce4c9588efd48f2d0b7155591f6f305222cbfff7154cadc SHA512 64d54145899db947499b706310941980c75b515cb8d88f67708153b625d782e62021826b9615dd4fe225f4435d9c9d4aa8583538109308625f703883599aeb79
diff --git a/sci-biology/pybrain/Manifest b/sci-biology/pybrain/Manifest
index 1c2d576e1..9acb5c6de 100644
--- a/sci-biology/pybrain/Manifest
+++ b/sci-biology/pybrain/Manifest
@@ -1 +1 @@
-DIST pybrain-0.3.3.tar.gz 1179157 SHA256 bf9180051cb8a89ee1125ec3fb9b8472454b7a9f238eeab07c42dfac774a9584 SHA512 d0b0401b083cf62260b65c833a12e71ac8d5d3079f24cce3eccccb7109a68493b1795b38603cf64251cc1653bec3ea00308fa6bc792d73c265d7cb4da0970ab1 WHIRLPOOL 3f8337aad6bfaccd426ec3685f2aa70e956e8217f8b5b75bbd082f445dd27d81ad8e2b714015ac3c1f5b3caf85ca4b96041f07486b04951377dfa14b97b52bba
+DIST pybrain-0.3.3.tar.gz 1179157 BLAKE2B 0bd96a4e0dc1626f50e9970a7d3dacc569a3fe63ec8fd7412e662eb347356ec2422ee4e1957025232078b097ee9a048cdcacd6e1156803cc25bf27aa771ece70 SHA512 d0b0401b083cf62260b65c833a12e71ac8d5d3079f24cce3eccccb7109a68493b1795b38603cf64251cc1653bec3ea00308fa6bc792d73c265d7cb4da0970ab1
diff --git a/sci-biology/pyfaidx/Manifest b/sci-biology/pyfaidx/Manifest
index cb3a06f06..da863afee 100644
--- a/sci-biology/pyfaidx/Manifest
+++ b/sci-biology/pyfaidx/Manifest
@@ -1 +1 @@
-DIST pyfaidx-0.4.8.1.tar.gz 22154 SHA256 23a5ab30af3ef2ecf2520475517131d74e635a9077ffdd582f9a7016eeba069d SHA512 1fc13bc40885b44eaa6846f3cbc119f52dc2e06c3d35736095678dc8db987412ea3693572ad837729039a643eba1b07a5db33dfde4acd4e92a43e156c1d523c3 WHIRLPOOL e73d6c31a20d8c29bd882d0c410b367b6fa17b93b081d2a603b79e825c4dd50b523b3f738c6aff28f58e7d3ce93e141c7c0efb5fd58f636c0d672d08515fbd07
+DIST pyfaidx-0.4.8.1.tar.gz 22154 BLAKE2B af1840e86624facf3bfdfd0a09e9f48becd36adb4342db942238fa1a2976a3092c09f8631690acafeb3295dead5cbf23ba7969ff7fcb08287fb843680223f81c SHA512 1fc13bc40885b44eaa6846f3cbc119f52dc2e06c3d35736095678dc8db987412ea3693572ad837729039a643eba1b07a5db33dfde4acd4e92a43e156c1d523c3
diff --git a/sci-biology/pysamstats/Manifest b/sci-biology/pysamstats/Manifest
index e1d047535..1b3419190 100644
--- a/sci-biology/pysamstats/Manifest
+++ b/sci-biology/pysamstats/Manifest
@@ -1 +1 @@
-DIST pysamstats-0.24.2.tar.gz 269977 SHA256 abd484742977386c9df4f936c461e455d5dbe3e8a20c89353f2a4dd366eb370f SHA512 a22a929d2f4d762256563e270c781a37bfe7e7f0aa3ad263d4f0c82d09003ae644cce658d02480e8b6d6506898ef062a5a7ad1612f2bb6819fcb6fe02b00bcfe WHIRLPOOL aac9dce3d6388c46d691fc42727bc37c22e85d1b1528607580b0612c387d8eff1fd0be9e5b5fb886c6318c13f24d9b3e28cdaa9b95c887a4d872d376adef22f1
+DIST pysamstats-0.24.2.tar.gz 269977 BLAKE2B 45abe9a869955b3b611965f3d9e9364c67fe35b1a5b96ea7ff0d015df4720e3925ccc825ed4c8983b39e1d8d570f500e707c61e7d904209025e811c79bc66e7c SHA512 a22a929d2f4d762256563e270c781a37bfe7e7f0aa3ad263d4f0c82d09003ae644cce658d02480e8b6d6506898ef062a5a7ad1612f2bb6819fcb6fe02b00bcfe
diff --git a/sci-biology/pysurfer/Manifest b/sci-biology/pysurfer/Manifest
index e115c295a..c7d62837d 100644
--- a/sci-biology/pysurfer/Manifest
+++ b/sci-biology/pysurfer/Manifest
@@ -1,2 +1,2 @@
-DIST pysurfer-0.4.zip 1900346 SHA256 c56df50a05a744dafbf3c2436bbdf685999e0bb8eb063e239a6ae8feaf8636c7 SHA512 74ea0dcb8d432431c200caff9ea72f7bc5ec22b4234079177e0f114e652b34efefc06c1ca6fb6b05c0ee50176513917d8f7c447093c94c1bd1180d59cee36798 WHIRLPOOL 3ada135f9924418e1306478fbca9f1729618cace36e026703dad303930041c962818d9f29957c76fb2d95e942b06127c25a116950b8c81e95c25cc56e5e4e3e2
-DIST pysurfer-0.6.zip 11911071 SHA256 e27a23f8d180cbe90a3bca74c77e115787ffdc68fd8ac8b26fd08de2c8d54557 SHA512 1667acf0ce9a6d6f7b4eb2a46a2f9a5c17296fa01104c78f5be0f085e2b8a77acb63eb8fda36f27464f94bc376782ae0f94f84e34648bdf43a934fd1ca128ef3 WHIRLPOOL 25752f71e5d7615de6c09241de7aa31daf174f7516fcf777e592a0b802422b7006fc0d928a3b891c32e10fdebc33e44f9856ad860e33f47da005b5f9c6a32c2e
+DIST pysurfer-0.4.zip 1900346 BLAKE2B 63212cb734e6bb970e2d102289d927eca1987ef33619b0d0b340050a478a6f8b2300d477e9a1389b580cb00b16c2c8b7b3913e5777abcfce3d8185d1dbd0d6f7 SHA512 74ea0dcb8d432431c200caff9ea72f7bc5ec22b4234079177e0f114e652b34efefc06c1ca6fb6b05c0ee50176513917d8f7c447093c94c1bd1180d59cee36798
+DIST pysurfer-0.6.zip 11911071 BLAKE2B 2a32125e533645251f3aeee33d0562dc1da76b66fa85dfdf7cb4857fef856751a14b03d5f7b322c2440aaac1f4b811cec858c3f177292059f2818138122a46de SHA512 1667acf0ce9a6d6f7b4eb2a46a2f9a5c17296fa01104c78f5be0f085e2b8a77acb63eb8fda36f27464f94bc376782ae0f94f84e34648bdf43a934fd1ca128ef3
diff --git a/sci-biology/quast/Manifest b/sci-biology/quast/Manifest
index d068350f0..6a16099d1 100644
--- a/sci-biology/quast/Manifest
+++ b/sci-biology/quast/Manifest
@@ -1 +1 @@
-DIST quast-4.4.tar.gz 29635321 SHA256 63deca63fd9889d0f0a3fd8cb7f89a0475f02f9c5c80f2c11695ee1557b9eb87 SHA512 3ec1cf367f69493d89132f23c3bdfa5c648ebcad4f0bc5e5c3828b43f58fc79f8d51661589f6cd66c835d58ad3a4d1073da2061ee6785c2c0790aded2f670fc9 WHIRLPOOL b11d8ec88332e873a4c6af95686cb442ee3461f3be9292c7f17d8e1832c6efe7e6d60bb075ad091e5533dfef6e682545738ef9bd1d94534bd85a252871a7af28
+DIST quast-4.4.tar.gz 29635321 BLAKE2B 4f7e6de19ced81299ee2b79161212aaa5c1b5188c421599942170ed58c7922e01af2cf0f2d66781e6eb6e5f74a6bc87ed67282f87fd248eef86b1e2b7f8f838a SHA512 3ec1cf367f69493d89132f23c3bdfa5c648ebcad4f0bc5e5c3828b43f58fc79f8d51661589f6cd66c835d58ad3a4d1073da2061ee6785c2c0790aded2f670fc9
diff --git a/sci-biology/quicktree/Manifest b/sci-biology/quicktree/Manifest
index acb09d64c..ad1fb6b71 100644
--- a/sci-biology/quicktree/Manifest
+++ b/sci-biology/quicktree/Manifest
@@ -1 +1 @@
-DIST quicktree-1.1.tar.gz 39035 SHA256 3b5986a8d7b8e59ad5cdc30bd7c7d91431909c25230e8fed13494f21337da6ef SHA512 1b58b786a5f0c96d7a86280e0349eb48b9a1f11160e0266e6b837dfde20a159de1393ec46bc4cdcaae09ffa59c68e8bbc5a985286133b67d6ab8fa6e248823fb WHIRLPOOL 0837a98f78f2ac56ed1f19d89a6e6fa632de4946d3a8b2fe8ec58347e58cf0cc1bcf52dbfaf63bcbc29a3994dc0f3fb61c447e0dbe4711c00201a5ac8a4b9ae7
+DIST quicktree-1.1.tar.gz 39035 BLAKE2B e6a3c4e1ae7f2b7af65ffd5f71c00902cea51605895572c134c2fd999cf0d87d3f05b1cc1b6c43811d82a3abb1f82dc0987bef57f5dce6fae25c5d3a38fd51fa SHA512 1b58b786a5f0c96d7a86280e0349eb48b9a1f11160e0266e6b837dfde20a159de1393ec46bc4cdcaae09ffa59c68e8bbc5a985286133b67d6ab8fa6e248823fb
diff --git a/sci-biology/quorum/Manifest b/sci-biology/quorum/Manifest
index 3d07323d5..b075a9136 100644
--- a/sci-biology/quorum/Manifest
+++ b/sci-biology/quorum/Manifest
@@ -1,2 +1,2 @@
-DIST quorum-0.2.1.tar.gz 369756 SHA256 d9287fd2f23894c779f8cd087ba09aea9a6b550e9937533131dcd7fde108b543 SHA512 137d867dc0b8b8d6d1fdc8de1de955f512b3da5d78f6d489b6c3bb8130e4b2a702830afe271e3d98894dfa8dead1a2b87bab348e3d513468a85bef40dd0fe07e WHIRLPOOL 99bd79ab20a508be1cfd0b1bd83f357329304c79dbf7785abc45c4790cc8fed36e38c94b7a4b643d29e3a76bcc06b8c049c31e70066dc00ab7a34ac3ee642df2
-DIST quorum-1.1.1.tar.gz 659218 SHA256 45d099835eaad43cf915e118e9cb6423411d68c7f35a8145bc725dca366c82b5 SHA512 12d7a03ffa45dd358f52c55226e6888fc92bff8e361e1c5eca7b4f8545d70243793dd963602932b895702284f89cd77361b2b5636c062d86b467b538df0b9f16 WHIRLPOOL 5a6642846d3fb2849bc51cf1d7da8c6fad447dbaa620eacef4d039418eb142e4b9853f8f19a6a3872bff473110b98c9be01e0c120154c32dbf316022f3cfb1a8
+DIST quorum-0.2.1.tar.gz 369756 BLAKE2B 2ace4d53a18c8bb1f34bab0a832137ee33b3aca879bbf06912e53053ea0159c45a8d7ce0694aa9138861d1cefcf57d0f6a998338672040e091771d32c40f6bd3 SHA512 137d867dc0b8b8d6d1fdc8de1de955f512b3da5d78f6d489b6c3bb8130e4b2a702830afe271e3d98894dfa8dead1a2b87bab348e3d513468a85bef40dd0fe07e
+DIST quorum-1.1.1.tar.gz 659218 BLAKE2B 26710674e12115b3d218c113eaa6b36d9694f85c65bb5e1a8b8e2b4405b585115b2e3ded34c84bdb24d680ae5a1d6e4c387689bdde8bc63824d8eb254d0894da SHA512 12d7a03ffa45dd358f52c55226e6888fc92bff8e361e1c5eca7b4f8545d70243793dd963602932b895702284f89cd77361b2b5636c062d86b467b538df0b9f16
diff --git a/sci-biology/reaper/Manifest b/sci-biology/reaper/Manifest
index ef6c1d644..157b6934d 100644
--- a/sci-biology/reaper/Manifest
+++ b/sci-biology/reaper/Manifest
@@ -1 +1 @@
-DIST reaper-15-348.tgz 143739 SHA256 1b25a9bbe97963ed08ee724d406145928de29f6d7a5bd4d5a5e1096f96f04fda SHA512 ac8186af07da26d5835e70dab878884daa4744ff3c5a13f5d8ec432881d579ca9b3585c89d232158d2b95af2533c9f79cb5185ab67819236d00d1cf9f576dbca WHIRLPOOL 79b6ab98e9e02b6ef01c35596fd68028f2342f81a319eecf5da5041fbe23421c8f571512aade6764b1f7626045f04357ff4889d60f57b2169e6a5cc30ab1bec8
+DIST reaper-15-348.tgz 143739 BLAKE2B 0b2fe464df4c823bf60a429e91215b5d793f8a66274b87611e7cf10ffa95ed9fc27c6d5a34b8e240eff99e1acb5377bfddabe77d1135b84983ceee4b6e9ed4e4 SHA512 ac8186af07da26d5835e70dab878884daa4744ff3c5a13f5d8ec432881d579ca9b3585c89d232158d2b95af2533c9f79cb5185ab67819236d00d1cf9f576dbca
diff --git a/sci-biology/reapr/Manifest b/sci-biology/reapr/Manifest
index bca2dc435..9bf4825be 100644
--- a/sci-biology/reapr/Manifest
+++ b/sci-biology/reapr/Manifest
@@ -1,2 +1,2 @@
-DIST Reapr_1.0.18.manual.pdf 325751 SHA256 304b7b7b725abc285791d8be3b2aaf6f4afeb38852ce91fa5635dc0a9913a517 SHA512 2960d93a330bd6a0aeda749213a83dc4fcbc5128be9c6bd1917ec2abea2def9406bbedad764d48d83b7f95c2da6207a027f98b341299d85c6ed898c5ca7b370f WHIRLPOOL 39744ee90218bdcad6fc630303a9453517d7fd0ecddb357cb354ee192c32d984af0b3cb1449165ef0d81e12ef87448d4e329fd29e4264594ff15f00d2fa19482
-DIST Reapr_1.0.18.tar.gz 7966110 SHA256 6d691b5b49c58aef332e771d339e32097a7696e9c68bd8f16808b46d648b6660 SHA512 12f1e97da6b6a3d080df29d9055aaf4ab2d02eb19a6c9eecb9d1e7268bf13bbe531feda6496d4b74c63ab53db0d1be15ed72f3391c47f9b1a23c34ed6a6c5fcb WHIRLPOOL 2d8079e123785f0984f1d6c8188c7c477a6d49a8f0632e430cb4865602e5a160b8d03b5e4c9ede4653c3a88d9296261f4356ee5423d572fda7cc0218564416d6
+DIST Reapr_1.0.18.manual.pdf 325751 BLAKE2B 67f44d91b312d1fed27b74ee80506fc86fa73b06df18cb2312228d46500c4e77388ec7e93e8d13b6e98c967ebf9cac87209852a551637584e84c081b8a450984 SHA512 2960d93a330bd6a0aeda749213a83dc4fcbc5128be9c6bd1917ec2abea2def9406bbedad764d48d83b7f95c2da6207a027f98b341299d85c6ed898c5ca7b370f
+DIST Reapr_1.0.18.tar.gz 7966110 BLAKE2B a6537757d62bcf0255fd18204df8f7a6678fb526eb4a5f92dee296f83c44433e0f55c781a78602ad1ad46136b54cce0d83b148dbda34bd2f0527a82ea8e8738b SHA512 12f1e97da6b6a3d080df29d9055aaf4ab2d02eb19a6c9eecb9d1e7268bf13bbe531feda6496d4b74c63ab53db0d1be15ed72f3391c47f9b1a23c34ed6a6c5fcb
diff --git a/sci-biology/repeatmasker/Manifest b/sci-biology/repeatmasker/Manifest
index 1f2dcd9fa..7d20d7bfb 100644
--- a/sci-biology/repeatmasker/Manifest
+++ b/sci-biology/repeatmasker/Manifest
@@ -1 +1 @@
-DIST RepeatMasker-open-4-0-6.tar.gz 266192837 SHA256 778ecd988a0afbe90318c3e9c597f16ae46da593af5f94db9d05f8c30d6cfd44 SHA512 3ca3593a736ab3741c01cfc79e6bdce0ff069cdd12e7e98864b4feeabf93422247aebaf0305d2121b99fd08166be2f7cc443080a2966331dc7f4c45b800a8a97 WHIRLPOOL 24a9beef75215b3517183755bbe13d30a5f954eb74471705a15ce3f974f0b63fe836a62ff8f0f5ef99e72b27738d5888ce5f35379b90e72eb627031836ffcaf7
+DIST RepeatMasker-open-4-0-6.tar.gz 266192837 BLAKE2B 1c46cb8dfa48a42093b72b3e61aba2a8c566617ca049064224b4fe8a080a6f75ff2e01d2f53cd9d26e5dfe39aaa8596b051fb1f2ff8dcdc74bab3a574b33f16a SHA512 3ca3593a736ab3741c01cfc79e6bdce0ff069cdd12e7e98864b4feeabf93422247aebaf0305d2121b99fd08166be2f7cc443080a2966331dc7f4c45b800a8a97
diff --git a/sci-biology/reptile/Manifest b/sci-biology/reptile/Manifest
index 4e1ed40f6..ff7626ba7 100644
--- a/sci-biology/reptile/Manifest
+++ b/sci-biology/reptile/Manifest
@@ -1 +1 @@
-DIST reptile-v1.1.zip 79227 SHA256 400e30238599bc64320e1fd5c0b37a517a55e242458afc334bbf2f7dea5eb781 SHA512 ca397671d16e718926f61f8671920cff06f0ec458c63987361dc4c1b8b0742ee94759b22786ab3c8176238078a0d571d5b33edf805b176d8967a331a505c6d0e WHIRLPOOL 4b3342b9f1c3391c47c8ad761406d9cf81122df8231778243d81e2f377cce58c25d6cfee108e11ab69459cd51aff1121fa02dfce99419d14225f1d30a2ded062
+DIST reptile-v1.1.zip 79227 BLAKE2B 23be3768918eb5a9c15b2958a5a067ddff2d1cab978eb537a447ea38eeb8c360d2d66e1095666f854f4fc7efadf20cb54408f5a159182384766100568f453abd SHA512 ca397671d16e718926f61f8671920cff06f0ec458c63987361dc4c1b8b0742ee94759b22786ab3c8176238078a0d571d5b33edf805b176d8967a331a505c6d0e
diff --git a/sci-biology/rmblast/Manifest b/sci-biology/rmblast/Manifest
index 00c455fce..2282ca6fd 100644
--- a/sci-biology/rmblast/Manifest
+++ b/sci-biology/rmblast/Manifest
@@ -1 +1 @@
-DIST rmblast-1.2-ncbi-blast-2.2.23+-src.tar.gz 10744076 SHA256 996be9886189364fff8ed39d4668122b2e5b8b010be47d929602416d95628eef SHA512 e7c2ebd114aee045ea3f3f462cf2658440e13a2d1eb777648386e1c5eeda9f8083af383c019f9b5802d935d6eb2367eef20822afc45233ddb44a426b4dd7ddb6 WHIRLPOOL aa3ada4297812a97614b0fe218de65d7474edfb5910e156eb09b625d45338a97b35f46876f5edf6105ead8b321a28f55ed7de2ad251bbc48ffd0cfa65ee2ac7a
+DIST rmblast-1.2-ncbi-blast-2.2.23+-src.tar.gz 10744076 BLAKE2B 6539ec8fcd345bcc1c3ecede6acec233cdc343c3df18748e195dc525f4a65fefeee8398471a26dc671bfed8612e010c26b7a8a66a3c7198f142c2e068ff72751 SHA512 e7c2ebd114aee045ea3f3f462cf2658440e13a2d1eb777648386e1c5eeda9f8083af383c019f9b5802d935d6eb2367eef20822afc45233ddb44a426b4dd7ddb6
diff --git a/sci-biology/rnaplex/Manifest b/sci-biology/rnaplex/Manifest
index 173cda438..1f4a592db 100644
--- a/sci-biology/rnaplex/Manifest
+++ b/sci-biology/rnaplex/Manifest
@@ -1 +1 @@
-DIST RNAplex-0.2.tar.gz 579904 SHA256 a30ab9128e4b35795f5e6f1e32a8a66b6fe3de1b6395a4326081cc6bec99cebb SHA512 ef91dd869284ad492b627b84288fe3c56a7c8d44dec8d2a48668efa4e476c9e7856380bc1e199604db4fa53f4d9bfe38cf057f2e181bf1b24ad375e5691a0a2e WHIRLPOOL bbba8f625373a5f0ae791c0e3239fb188764607635b79fe41ad364f71e34ed3fb018ba7aa629584cfa995b68e7c3bcf3ea67862e14686fec023de256b65ce423
+DIST RNAplex-0.2.tar.gz 579904 BLAKE2B d7e76a42be523e905ae96b9a0a4d26e7a9242ff93ae0819f66f524566c06816a2fa90573037af556f70a5feeb1221720147a33e60eec265f3a4771c3113897bb SHA512 ef91dd869284ad492b627b84288fe3c56a7c8d44dec8d2a48668efa4e476c9e7856380bc1e199604db4fa53f4d9bfe38cf057f2e181bf1b24ad375e5691a0a2e
diff --git a/sci-biology/roche454ace2caf/Manifest b/sci-biology/roche454ace2caf/Manifest
index 4b2471fb3..6711cecd3 100644
--- a/sci-biology/roche454ace2caf/Manifest
+++ b/sci-biology/roche454ace2caf/Manifest
@@ -1 +1 @@
-DIST roche454ace2gap-2010-12-08.tgz 261317 SHA256 aee60307eb8f9369ed0b17599c946e1b465c71ad122563b216af453e4f30ea93 SHA512 ce477ab88c45e947764d0dcb667f76de195db8f1ebc53ca6892f74017a79e231f77c458564a9ac682679bb6b486493ee6692157628401351de5a732894e5a732 WHIRLPOOL f6daca1e1051b1f9ff92af0e61b073bd0d1797a428e62d420b06717aaac0ba4dd532c9257c1f660a6a2829b5831957374b28120d956990f7c8fd5c07633269f4
+DIST roche454ace2gap-2010-12-08.tgz 261317 BLAKE2B e00ba3b1d19c9856447c74d3943854e2c6556c14ef19a1abe73a6e0375b8e889c57b4c00beda2f9f9adf6cb76f6f89a12bfe9c9782b5668c0f883e914fa68204 SHA512 ce477ab88c45e947764d0dcb667f76de195db8f1ebc53ca6892f74017a79e231f77c458564a9ac682679bb6b486493ee6692157628401351de5a732894e5a732
diff --git a/sci-biology/ruffus/Manifest b/sci-biology/ruffus/Manifest
index dd1cd624f..25c7b46c7 100644
--- a/sci-biology/ruffus/Manifest
+++ b/sci-biology/ruffus/Manifest
@@ -1 +1 @@
-DIST ruffus-2.6.3.tar.gz 36863807 SHA256 d78728d802013d91d15e5e939554dabce196967734850fa44634dce47e3e5061 SHA512 47d9090d51bda9bb8a14b1c874fd5980e52380cff707719760b1ce4c81f6ed6b7eceb8c37530ede7725bdec12e0a958e8f4a95f7acc1d6a75d907260c5f42d81 WHIRLPOOL 52d2244e4111306352b5326b40d437cfa6ce7f6ed0ed3f07d3110766d3256b44c1855ef1c545b265e839f69b5c7f2c04629db23034d4c208f9652f779803221d
+DIST ruffus-2.6.3.tar.gz 36863807 BLAKE2B 7862e42968b9e4af9daa89d13270a3b1472510e60252d46065fea5a977507a492070df4e17fa8a785417f1c220edcde8e3c8c0083b066b333d61be1401b9ece8 SHA512 47d9090d51bda9bb8a14b1c874fd5980e52380cff707719760b1ce4c81f6ed6b7eceb8c37530ede7725bdec12e0a958e8f4a95f7acc1d6a75d907260c5f42d81
diff --git a/sci-biology/rum/Manifest b/sci-biology/rum/Manifest
index 7ef715410..4fdb9270f 100644
--- a/sci-biology/rum/Manifest
+++ b/sci-biology/rum/Manifest
@@ -1 +1 @@
-DIST rum-2.0.5.5.tar.gz 5420665 SHA256 077fdee93f70d3d7cec05ddac22f07b22759f22c1fb63f927769beed2cd0670c SHA512 7a6600e7d98fa4649a281b161eaaaa2fbfd337b7b26b0d054e23974aa555a383d476b5464183b259812330c4e00a36be44a5efe210950e2ad24ab867375cb9be WHIRLPOOL ebcd634341016a46c098bc4708f93b51fa46f79dd367162711a965d3167f734f640d55f8415062e513f776149f645de7933b7f681614f3b38c1a3ec1a35d2585
+DIST rum-2.0.5.5.tar.gz 5420665 BLAKE2B 76fdb44b468e493c34be766aaaf62c2670f926a2c11b43f73e386db4d8bf7a05d5a33bfe03a3a314446c515fd60ef1b8e53982b33de7cbc081e0fe000209dbcd SHA512 7a6600e7d98fa4649a281b161eaaaa2fbfd337b7b26b0d054e23974aa555a383d476b5464183b259812330c4e00a36be44a5efe210950e2ad24ab867375cb9be
diff --git a/sci-biology/sailfish/Manifest b/sci-biology/sailfish/Manifest
index 7f7524587..0f31fa14a 100644
--- a/sci-biology/sailfish/Manifest
+++ b/sci-biology/sailfish/Manifest
@@ -1 +1 @@
-DIST sailfish-0.9.2.tar.gz 1617759 SHA256 4872c5241864ae12a3aa5e519cf6d2d38d0e510bfcfd420c8d05249f7ee83f82 SHA512 3bf62810c62f9284246f1095fb6f0e042ef9883867c3040d51e80e6370f40b286290f7d5620e2667e6301022777948edc4fdb7693b4fb1e31843f2d3c676f8a6 WHIRLPOOL c3d425551dd4e5cd5724572df7b3e2b7a6e1f90c26aa7fc3ff17dd181e21c4d1cb9e9c38870222eb9805ce9b6f11372799c39cb78ba85bf81607bc580262b511
+DIST sailfish-0.9.2.tar.gz 1617759 BLAKE2B ad58b26bdb337aac0156b1a3f6429e0cbfa40b3f513bcb46c4b630ba09c4f003e503a9e2ab84eb9260008c8b9a9529aa475bfe40bad74ac1c9809c81b5cce5d9 SHA512 3bf62810c62f9284246f1095fb6f0e042ef9883867c3040d51e80e6370f40b286290f7d5620e2667e6301022777948edc4fdb7693b4fb1e31843f2d3c676f8a6
diff --git a/sci-biology/salmon/Manifest b/sci-biology/salmon/Manifest
index 91a74e7f4..dc75c1f33 100644
--- a/sci-biology/salmon/Manifest
+++ b/sci-biology/salmon/Manifest
@@ -1,4 +1,4 @@
-DIST salmon-0.3.2.tar.gz 1674131 SHA256 e0c957f0bc612e1fd7d7c4383758396042b68ea08aeae024cadb5d63e6dd9cf2 SHA512 d9db133d8fb009a4b23251bce209a869644eb6139e0e4b9133f947999e0be4c30039f5cb8617dc4b73977cd690837abb407549a619ef82e6bb82577ff082becf WHIRLPOOL e2f8f636547c93fbf3fade454754352537bc5a9fce668b0989ca58f5f5b9ca8f2454077af5dfc948f0acf9c6c2a6bdd6995d481dc08fd0f3db938639435afc0f
-DIST salmon-0.4.2.tar.gz 1711949 SHA256 702c4893a3c73a72bce68b2ff1283467f470df5c6be72c1b0fcb2470229d512b SHA512 28d823d3a97a46861972594d13737fe173583a0ac6dc2ebdc5f117e880493a057b34f8fea0d26fb2827d17ebcc38a06358dfea08db70f4a76c7fbe553f2b031d WHIRLPOOL bab133da989e10c19709c9a1ed8d8401b1e0e685fe5c2ebc75097b15b1670783c7747fd2137530426d892a2608c82d029bf82f94705a7a7052a425f179449700
-DIST salmon-0.5.0.tar.gz 1651002 SHA256 390f6535966117ead358af98b60d5c2f51e26d4d98e019df6778cfee9046c875 SHA512 c695cbbfbf6a8ecbb20a46bfcc428b3be458200b4296baa686b2ed4f664fa40a7db719620a8f2c1d1b482600d9d0f0cecfe5f00af6407e6fc6f8f263f227b4e0 WHIRLPOOL fdcc750bff9608c12c9462534222624c48dff1b7d8f029c77e2f83247ff85e1e7542793be09a1c501bfe0ac63a63c3f2cf854b3c1c90ee6abc76526382d61b2e
-DIST salmon-0.6.0.tar.gz 1639289 SHA256 2a015c0f95b745fbed575d8610aea7e09cb1af55ca2c68e10ab15826fba263b1 SHA512 74de1aee5629a975816977fd26fe6eca08fef90fe5f99ba652e7e08ea9b2ffcb5c144c270529db9ca8f982ae25219a56ca7f3844eef00d9c6c14f488a41f2f9b WHIRLPOOL 587b3d32e81a989cae50d4bb50982e36ae49d1ab2a017ce03fefd5972822b308c2e80832140c202f502f52e95ac5634bee7721828c6ddce4701426aeebe63e70
+DIST salmon-0.3.2.tar.gz 1674131 BLAKE2B 2b6d124a01900db3e9a4c6c97b3559f0240a8376b612455bedce9187e5e73cb241ffe22128ba0af48c9f93d8f7862cce2d0692db6c76692e8556aae94e05b5c1 SHA512 d9db133d8fb009a4b23251bce209a869644eb6139e0e4b9133f947999e0be4c30039f5cb8617dc4b73977cd690837abb407549a619ef82e6bb82577ff082becf
+DIST salmon-0.4.2.tar.gz 1711949 BLAKE2B 0f4be6b394a0c37a3d721e89cfc5e3b28872128074fd805f2680b9a2d14e7cffc9416b3cff5b04867f84778f23d7a26bff6a1d09e2200c18c036367b24938759 SHA512 28d823d3a97a46861972594d13737fe173583a0ac6dc2ebdc5f117e880493a057b34f8fea0d26fb2827d17ebcc38a06358dfea08db70f4a76c7fbe553f2b031d
+DIST salmon-0.5.0.tar.gz 1651002 BLAKE2B dbeaa2ea5c63cd5a82a487224c215d92ce701ba45e73e6b71e51f22f0638b7dc9744f7bf5d4574ed670e99b79944bc1026df71036f7626e383308ede631ab214 SHA512 c695cbbfbf6a8ecbb20a46bfcc428b3be458200b4296baa686b2ed4f664fa40a7db719620a8f2c1d1b482600d9d0f0cecfe5f00af6407e6fc6f8f263f227b4e0
+DIST salmon-0.6.0.tar.gz 1639289 BLAKE2B e5fc6ad26237df6e54b79318449423fcf8a9941d5fa97f1b57244bb4ea7f81f2922191fe6eb16da6803f1670580c943e00ff2500e318d6bd8b5ab522815c3d05 SHA512 74de1aee5629a975816977fd26fe6eca08fef90fe5f99ba652e7e08ea9b2ffcb5c144c270529db9ca8f982ae25219a56ca7f3844eef00d9c6c14f488a41f2f9b
diff --git a/sci-biology/sambamba/Manifest b/sci-biology/sambamba/Manifest
index ea0a83936..c8fbec14b 100644
--- a/sci-biology/sambamba/Manifest
+++ b/sci-biology/sambamba/Manifest
@@ -1 +1 @@
-DIST sambamba-0.6.5.tar.gz 249275 SHA256 7ea356109543eb51066e46691e332d3f42f5d67e42db7f801baa9826e333079c SHA512 a0353523bb921a32e4f7601d9c5552b2103567cfa23fb622b213170028122f49cb6929942e9a630890ddd93b7ebf00f048344edb75d5f2d10b1c86bae018497c WHIRLPOOL 6a88cf07e18a07416bcafe3350ae7d168e6a10063eae072376e9228d36a686db6dfa0e7506ad7042f26ea4cbbfea40c12c4eab2c1c66795cb26953cb3133f248
+DIST sambamba-0.6.5.tar.gz 249275 BLAKE2B a01b2863053838c1fe7151e7baf3041c1396ad547ec962d495b8c486cc6f0cdfcbd1cc5c6963795017dfd77e27a605462aa11fb7043dcf2f6ad666e64ad8bbef SHA512 a0353523bb921a32e4f7601d9c5552b2103567cfa23fb622b213170028122f49cb6929942e9a630890ddd93b7ebf00f048344edb75d5f2d10b1c86bae018497c
diff --git a/sci-biology/samstat/Manifest b/sci-biology/samstat/Manifest
index d0d3b2ff2..1a02f8933 100644
--- a/sci-biology/samstat/Manifest
+++ b/sci-biology/samstat/Manifest
@@ -1 +1 @@
-DIST samstat.tgz 35200 SHA256 bf4b6ce9430e4fb54a3a1689ca6a502bd5923c33937ecb272131f89428d7a11a SHA512 3ddf4b23308530a57bf2874057e3446c42510fff4ef8dd6f53bd05886545a24edc05924601f67307a91325f01b7a7b21d26557b54f01a907ff067b1187c3a872 WHIRLPOOL 8704ca020f28aa1bb86a5c1c445048e67ad5ae6d17a1088844ad11395802c1af170ca868841bd4743dec5f1ef6d4390df255459a963f6e189b3a6d13085725dd
+DIST samstat.tgz 35200 BLAKE2B 194577b4cd85f46c17f699a24499a52b887b1c794696b6cef4ea4b3c8e8abd8b9642e9df80a08e4ffd6c67572142bfe96af765807d87ef4951c5d907da2b52d9 SHA512 3ddf4b23308530a57bf2874057e3446c42510fff4ef8dd6f53bd05886545a24edc05924601f67307a91325f01b7a7b21d26557b54f01a907ff067b1187c3a872
diff --git a/sci-biology/scaffold_builder/Manifest b/sci-biology/scaffold_builder/Manifest
index d108d6b22..8bd2afc78 100644
--- a/sci-biology/scaffold_builder/Manifest
+++ b/sci-biology/scaffold_builder/Manifest
@@ -1,3 +1,3 @@
-DIST Manual_v2.1.pdf 25897 SHA256 13b521d9e27ae919df834096437650e4e17a632e17fd36aa90122454258eb41d SHA512 48ba5fcd33ba7585c970d29df477686afe19ed0d0d30184661cab3ac10e39fdbce6174ec85a126c18eac038c62464068b5c012a70ca256c9ec5c7ef4032710ab WHIRLPOOL a9eaa282357583c8f1ff870bffad31bde7f7524bf871a572caed8d7769d61aa4dd88fb6a5931c59a1e9ba0ffc3cb8c7a0ab88d58e472db72be9336d4ad5b5104
-DIST scaffold_builder_v2.1.zip 20864 SHA256 3523dd004b0fb63c915f748877a7e600c302212a95bdcdb6f16c1678717924e8 SHA512 9d092ac0275cc3cfecdc0172bb0817fa3d404efb3acd7b3b3316db3787817869dac20cae245806b6e086f0d4c5cbf757fd665f38f09478ea207c9a11af6acf16 WHIRLPOOL 99db788904aafd7ffa776919720fdef8dd0c97650c47996028a9443c0d835989baaf88bc3ecc7fd4cb04bd3a45b80490e92624d9bba71b668eb17e79637c78fc
-DIST scaffold_builder_v2_help.doc 50176 SHA256 24e194ebe3ffcc07fff5672558cab901c661dc5016fad958068290e2fca7d5a7 SHA512 1c3fdf085864a9a1cf684578af468166e4034c55a5576ab3d190443c323272152dcc19678d509cb2cccb3aac15570861f7483f4400638c8ef5af7aa1a6689ff2 WHIRLPOOL 5450122142378795a1003c921b061d20264a6ddd1381186a61c06b18deda244afafd6452ea2d3f3f8355b56fdf3a22ce996fafa1020afa8c597b05e07c9c6918
+DIST Manual_v2.1.pdf 25897 BLAKE2B 8a5a54609554904e8c29102df6588c7b4ea50e69bebf286ebb0e6c7fcca497ab4f0d7642e36458b3776ac0d2df50f9ad8ae6838a47f21eda79c53c12d0f273c1 SHA512 48ba5fcd33ba7585c970d29df477686afe19ed0d0d30184661cab3ac10e39fdbce6174ec85a126c18eac038c62464068b5c012a70ca256c9ec5c7ef4032710ab
+DIST scaffold_builder_v2.1.zip 20864 BLAKE2B 318f7b02de49acdc29ff7e10f882b9ea8f8c8437eb561e1c7d7462008e6dbbfaf79075d71863affe694142e42aaeff59ccf1fc2b4c7ea2982af9ad9d1a335d99 SHA512 9d092ac0275cc3cfecdc0172bb0817fa3d404efb3acd7b3b3316db3787817869dac20cae245806b6e086f0d4c5cbf757fd665f38f09478ea207c9a11af6acf16
+DIST scaffold_builder_v2_help.doc 50176 BLAKE2B 2b49f43a89c58045f67adc48b8ba3b91325e9d8bf9bb22b4048d60dfebb39a5d3acea54813fe84bce78fa91dbeb2898923cc67e7acdf3aaff7bdb32ef1cc4758 SHA512 1c3fdf085864a9a1cf684578af468166e4034c55a5576ab3d190443c323272152dcc19678d509cb2cccb3aac15570861f7483f4400638c8ef5af7aa1a6689ff2
diff --git a/sci-biology/scan_for_matches/Manifest b/sci-biology/scan_for_matches/Manifest
index ebbcedbef..efc48e7bc 100644
--- a/sci-biology/scan_for_matches/Manifest
+++ b/sci-biology/scan_for_matches/Manifest
@@ -1 +1 @@
-DIST scan_for_matches.tgz 83918 SHA256 c6b17930efbdfbac28b57c3a0b4f8c26effb36c48988d82e41c81c6962e2d68f SHA512 faa525bfcf72225b35eb8ac2e7404adb5b172f6f94e39d2173d73713cb98ee59260bf057bfb25ebe5ed0f39311be4032fee86e350d8f7174289926df6c4eab27 WHIRLPOOL 5578410eaa531575f4125186319c8c38de5370bd768885e7392ae00decebc0d768c6cb46d8065ae8efa73b15ff8683676556461dc5dc25df95b27ff22326257c
+DIST scan_for_matches.tgz 83918 BLAKE2B f9e16be3b061967f72b18c92c6701b32b6a5f62c8e37b74a836e2db813bee9876bca78477249239a12af6d0e2278a6f743d6410557d326b8032516aa005352cb SHA512 faa525bfcf72225b35eb8ac2e7404adb5b172f6f94e39d2173d73713cb98ee59260bf057bfb25ebe5ed0f39311be4032fee86e350d8f7174289926df6c4eab27
diff --git a/sci-biology/scbi_blast/Manifest b/sci-biology/scbi_blast/Manifest
index be6723e92..6feefc4d0 100644
--- a/sci-biology/scbi_blast/Manifest
+++ b/sci-biology/scbi_blast/Manifest
@@ -1 +1 @@
-DIST scbi_blast-0.0.43.gem 22528 SHA256 cd45b1c5a5fa85636b2d7a7baf498259136233aba8dfcb2fd28d732a112f23f3 SHA512 e2456146ee5f2bdf06135d0a588d347e90dae2bf61eaee5a044f74be6a3604a0226df45a72074f809ad81694afd2db37f0dd208b2675c29063b691f5a8a77692 WHIRLPOOL d40d4b439e1d207c4eab8b359f18acce8b668b2f88cb561a007417d68974c1c97297cafa54ba6c3f97bfca4601a745492e4913c050feca36107f451911d63bbd
+DIST scbi_blast-0.0.43.gem 22528 BLAKE2B b93d2bba19d3e3e13dfdc8f9e97eed6feabdd5fea61193f0b88ae7a83aac0a9ee018d064d511126d42917dfed76b2ab53982bc86a0db5043edfa11a81d9b576b SHA512 e2456146ee5f2bdf06135d0a588d347e90dae2bf61eaee5a044f74be6a3604a0226df45a72074f809ad81694afd2db37f0dd208b2675c29063b691f5a8a77692
diff --git a/sci-biology/scbi_fasta/Manifest b/sci-biology/scbi_fasta/Manifest
index 52164a787..2093e4af1 100644
--- a/sci-biology/scbi_fasta/Manifest
+++ b/sci-biology/scbi_fasta/Manifest
@@ -1 +1 @@
-DIST scbi_fasta-0.1.9.gem 9216 SHA256 9945a3d050b1e6cc5829a99432d3880b1a399470e5611ce86e17d0fc210da4e9 SHA512 1a5c71fb3224a6b202bd0fd5098696f73eb22a5ed3ceeafcaeff01326fce5aa1c3856876bc6e1bde9610fc8429e364135080dde69eb9a125f1f770a27239bdd0 WHIRLPOOL a6f750423894997ae39c13077955bdd89ba9ea522ea31225c9d7a19d6a99aac1b3e8d618181ef3bfa9d21fbae7f775b4bac732edc6a5cb7ae5785f973a5447e1
+DIST scbi_fasta-0.1.9.gem 9216 BLAKE2B 6c49b8c619f103f010cfc60670c9a1b121ef33b3b7b69eee326e941fa83add51eac70e51ab0361d0bd57618df373020b68b94eddef2310d7b3c6d1d54c84dbef SHA512 1a5c71fb3224a6b202bd0fd5098696f73eb22a5ed3ceeafcaeff01326fce5aa1c3856876bc6e1bde9610fc8429e364135080dde69eb9a125f1f770a27239bdd0
diff --git a/sci-biology/scbi_fastq/Manifest b/sci-biology/scbi_fastq/Manifest
index 510de0e06..0e0e7ac07 100644
--- a/sci-biology/scbi_fastq/Manifest
+++ b/sci-biology/scbi_fastq/Manifest
@@ -1 +1 @@
-DIST scbi_fastq-0.0.22.gem 666112 SHA256 e0b0f41c9a7bd3c3532b19ff4a3aaecddd7581f2c0d05ab13b05f265dbf02480 SHA512 84ac0b947b9c28114137208bec4f666004559cda38114cba6dc8dde8304f56c60dd2a54ea36fb09b320bc3ceb9261569008c8a9bcac1777192a2f5cd5f61c090 WHIRLPOOL 08d6c087a6a6269c96b603969a7b016f1f23ad75e54e7ec65e8ee80b2fa9ca5899d5b3427fd4da1fe09909d0334deb893eb20be542ca90d5e175ffd4663d7cd6
+DIST scbi_fastq-0.0.22.gem 666112 BLAKE2B 23a9dc35876ffcba0327668f8ebcfb8054a858a822ddbe7350dccbb9ad1812703bebc2eeebf4223eddd8a795c464e0ab4198a5e7fa33cdb611a6609ed5c5be47 SHA512 84ac0b947b9c28114137208bec4f666004559cda38114cba6dc8dde8304f56c60dd2a54ea36fb09b320bc3ceb9261569008c8a9bcac1777192a2f5cd5f61c090
diff --git a/sci-biology/scbi_mapreduce/Manifest b/sci-biology/scbi_mapreduce/Manifest
index 78eed5135..a8a6fe376 100644
--- a/sci-biology/scbi_mapreduce/Manifest
+++ b/sci-biology/scbi_mapreduce/Manifest
@@ -1 +1 @@
-DIST scbi_mapreduce-0.0.45.gem 765440 SHA256 edb24196f9569cd1af72f89fde5ef6206f5f0fc97902975d3c842627c2266b03 SHA512 77de3fdd5f34669e8ea881c244dd69e6ecc6beab560ea4e7132f00dc77d85e6e77793f2fdf0de2d951dce05b481b71d31960b2c447f9ff91f5b250cd83833ba4 WHIRLPOOL db39c45d9a3efa1742fb3307669e39e80fecff97224fb4ed173c90856c6eaa7a1d01a3a6f6fab1b7c8aaa3e62a7b1ea8ba66008f617c38544cdc5ec11f13cfad
+DIST scbi_mapreduce-0.0.45.gem 765440 BLAKE2B 6dc4ea3dd79d365a992caa8c290dea87b6f9e65046fcac2e607c03b3ad2ca059be8030c98b108e7c66a3831dd9596dd82741ab78801ce6ed45734c70d925e062 SHA512 77de3fdd5f34669e8ea881c244dd69e6ecc6beab560ea4e7132f00dc77d85e6e77793f2fdf0de2d951dce05b481b71d31960b2c447f9ff91f5b250cd83833ba4
diff --git a/sci-biology/scbi_plot/Manifest b/sci-biology/scbi_plot/Manifest
index dfa89a28d..3463d9eb7 100644
--- a/sci-biology/scbi_plot/Manifest
+++ b/sci-biology/scbi_plot/Manifest
@@ -1 +1 @@
-DIST scbi_plot-0.0.7.gem 9216 SHA256 730010153f5d8256c01fb3a10df2d56488983097463ab6f674cd5bdd0fcaa9b3 SHA512 be27448fb0c73e184d395d139a26b9c82c8726bf0879e6ade22002d4cdd004098293cc33c8780768408af338cf6fdf506869adc56e583db5538b266bb0e8f54e WHIRLPOOL 5fb465b8bd2487d0b4a5d90342d9bea8aab389670438cd3be9b707523fbb4041bd9f1ca3bc21b4a0fdbd3969a236f074ff8130be67131efc732fda6ec18b4267
+DIST scbi_plot-0.0.7.gem 9216 BLAKE2B f3c0f7c79bc2fef47bc37097fb6f3ab1f9068505c66240ba0527e142a8c2dec2651910d76f83ab162fc744cfa0216d5281972f9cf260d642a3ca88fe157a8ff0 SHA512 be27448fb0c73e184d395d139a26b9c82c8726bf0879e6ade22002d4cdd004098293cc33c8780768408af338cf6fdf506869adc56e583db5538b266bb0e8f54e
diff --git a/sci-biology/scbi_zcat/Manifest b/sci-biology/scbi_zcat/Manifest
index c924095ee..562b759b7 100644
--- a/sci-biology/scbi_zcat/Manifest
+++ b/sci-biology/scbi_zcat/Manifest
@@ -1 +1 @@
-DIST scbi_zcat-0.0.2.gem 7680 SHA256 59d499fd752824a546a9e262419726bc1fa16f0624538f2347071a1db4088744 SHA512 b37433fe26cabaf8702be4ce9c4282e0c094f637e739bc51b6b760e10531f559acbebd50cc8f7aadb22c78cb4dbed15297fa595c3cd460d8aecde51587407f48 WHIRLPOOL 78414f27993e292c6b60e9619c51e27694a89d376fb79fbb88c9c816f01de6fb7db57200489c2dba414adbe4fdb0982d5f92caa71d7ee46d76be1f8e225eeaf4
+DIST scbi_zcat-0.0.2.gem 7680 BLAKE2B 2d27c1d970d7ee680504fc463e4a706bb25558194158c8c735cde454f952b27d26819a5123c3fb413d30c126050e7f56385e26a3c317e320802d34e40aa16389 SHA512 b37433fe26cabaf8702be4ce9c4282e0c094f637e739bc51b6b760e10531f559acbebd50cc8f7aadb22c78cb4dbed15297fa595c3cd460d8aecde51587407f48
diff --git a/sci-biology/sclust/Manifest b/sci-biology/sclust/Manifest
index 9a69104f5..4524ce986 100644
--- a/sci-biology/sclust/Manifest
+++ b/sci-biology/sclust/Manifest
@@ -1,2 +1,2 @@
-DIST cdbfasta.tar.gz 59735 SHA256 68767e8b2fb9de5a6d68ee16df73293f65e02f05cf2f747a9dd6b8854766722c SHA512 500b3cdf4bf4e21c78a285739c6544e3f2bed377f8e3858c8ace240a9107d765c89cff8004ca2ea001860abc04fc48bc37c03569da5b16115f4419f5fd9bcd5e WHIRLPOOL 3c5beff7ea7d7c6dd6f71755cbb5ea4fabc2ee16aa8d6711906b1a092668cfb889ba56605117133b7e32ab50d6a4986e454f94e32bcd57a5508f1f93788a9dec
-DIST sclust.tar.gz 13467 SHA256 2ec82d2f8751188a7b774e2335839ba931dcecec82d68f7d755ba1c871ab4f9c SHA512 5cfee8b142f1fd6f7f289407b80dfa91fcb71d94c1cf3ebc979d000b31690c88dc544bab830a30e783e4e17232bd141b4d6f45a6e1ee4e75ae85bdef07fb6650 WHIRLPOOL 35cb7e4e7ac57872d8bfe88cc4e20f29283d0215101992c00ecd0bab7a3113d99a97121d2e14e6eb8a6d29dbf1cf4132f2f1ccfe95de08d7a6edecf5d13e3a77
+DIST cdbfasta.tar.gz 59735 BLAKE2B 69107a42e1b8069a70de9333891e050785cabaf6457245b4512c3725dc576ebfba54c43c3d1e356948061cf903a89a8aa0f011efbf36a4cda6b40a623f7019fe SHA512 500b3cdf4bf4e21c78a285739c6544e3f2bed377f8e3858c8ace240a9107d765c89cff8004ca2ea001860abc04fc48bc37c03569da5b16115f4419f5fd9bcd5e
+DIST sclust.tar.gz 13467 BLAKE2B 8e50ae561da3665728dca8f055a60194577b93c537a84af5a9595d28110743e13e7c3f5c52855946ad4990f83ee5febc570e96ed2b4a82b2851d7b4bd3e52ad6 SHA512 5cfee8b142f1fd6f7f289407b80dfa91fcb71d94c1cf3ebc979d000b31690c88dc544bab830a30e783e4e17232bd141b4d6f45a6e1ee4e75ae85bdef07fb6650
diff --git a/sci-biology/screed/Manifest b/sci-biology/screed/Manifest
index 432ec3742..90079a017 100644
--- a/sci-biology/screed/Manifest
+++ b/sci-biology/screed/Manifest
@@ -1 +1 @@
-DIST screed-0.9.tar.gz 115709 SHA256 20a22681855f40387fe0b580d9da639aaae89ab9b3f893a591a34f97eed79fa1 SHA512 204fc0f7a62954a21f4fd0f6801abb8fe404e9e29bf00da07d28cfce0506c13971370963bf4c5749e05640a7a1f402b0404219bccdfb02b6070a386bc41105b1 WHIRLPOOL dcecccd1a402c869c120a61d829e7ce530c50659b765dcfd18dfdd1960b559f0df6b006df46087bd26b6e8995985cbc9ca7b5baeb246fc87054a1efe7d32f81c
+DIST screed-0.9.tar.gz 115709 BLAKE2B a8eb4ee02ea0038624d3c6e2537194e8c605c7599fe0848c85adcb97ed5d3b11087d7266d33a5b3435d411cc22e829b04c7e33eea002e797aa904af8fa5d971c SHA512 204fc0f7a62954a21f4fd0f6801abb8fe404e9e29bf00da07d28cfce0506c13971370963bf4c5749e05640a7a1f402b0404219bccdfb02b6070a386bc41105b1
diff --git a/sci-biology/seqclean/Manifest b/sci-biology/seqclean/Manifest
index 05fbce5d7..5a742c218 100644
--- a/sci-biology/seqclean/Manifest
+++ b/sci-biology/seqclean/Manifest
@@ -1,3 +1,3 @@
-DIST mdust-110625.tar.gz 7526 SHA256 9722806920fc6772dc92f99e7a59554c5f7c35b596dca0df9ed03ff2e5c6440d SHA512 349446115d3b778d28a184eb118ada112476b2c51a058dd7467ff539678f7550dab675a731c452f9aa002fda9a54f13576db02302df935946d034eb9e0d4566e WHIRLPOOL a20eee5ab1181ce43a23e04b4bd2511aa29368796272ef7ccd031070a0745205b026eff5dd3f55aeadcca295bb702aae208efa90dda4147df96fc0731be07f8c
-DIST seqcl_scripts-110625.tar.gz 14840 SHA256 bc8bba4fcff5e012a3eafe48fc5d5f843e9689aad5f063c595bede9ac5b27e43 SHA512 84cca02165856f51614b05e3fb416765695ca3442a8f9d47ee341946a375b6fc9ec6b77e5f18b58d21d5a6e93e21010a866efd2940dc60771f9e6e97722d5a96 WHIRLPOOL 17d8a5e0f4106a5f69534ed3bb24ef59ac0470fcaf7b46976154ece0514631d4bc9d3b9b29fe0e7d90228024b6c9301bda314538d8a49114c1fee5fd2454e83a
-DIST trimpoly-110625.tar.gz 12747 SHA256 e6dfb3cb6b8e205a5627d20029207cd0a87be5095b4c556b6b3f716fba287666 SHA512 74e7ed6169cbe5f9e9bdcaaffed8ceb74c4ea1ccce912fc656dc29f5ddf8bbeee2975814c97691a8b5eb419c202e332ba79634feb11ffac9a3ab3341db61076f WHIRLPOOL a805457e1e144fbb8fb659d265250d56ac6e37d57c60d96c9c1f927e33ed680e9767550de5fcd123676954e44d7b15be3d7196a4fb4a5ec0b470343b4adc626b
+DIST mdust-110625.tar.gz 7526 BLAKE2B 9d2f91025d6cfccb8c75b8f2d6c9f3df9b76469ef7b77a74c3bbd3e37c2d2ba0ce737eaca518200246e1c302d7862af4929bad4bffb6c53692fbfaa586dbf4d7 SHA512 349446115d3b778d28a184eb118ada112476b2c51a058dd7467ff539678f7550dab675a731c452f9aa002fda9a54f13576db02302df935946d034eb9e0d4566e
+DIST seqcl_scripts-110625.tar.gz 14840 BLAKE2B 107ac1d966870f976c5b8f2bd74beb95f49cc1d57975c686e730ad4f519378c3435a626c086244f04e3e075d9f63d1f6541a9bf8dbae1c141ccc3bbd8c613fb5 SHA512 84cca02165856f51614b05e3fb416765695ca3442a8f9d47ee341946a375b6fc9ec6b77e5f18b58d21d5a6e93e21010a866efd2940dc60771f9e6e97722d5a96
+DIST trimpoly-110625.tar.gz 12747 BLAKE2B e395c19549e376b373028c9ca22197021dcf7a7465f2528e1b9051d5e9bbd27c8180103a0a849c3aa8de98eef0edeb71db18b457a62bd3a07e6fe68e083d4062 SHA512 74e7ed6169cbe5f9e9bdcaaffed8ceb74c4ea1ccce912fc656dc29f5ddf8bbeee2975814c97691a8b5eb419c202e332ba79634feb11ffac9a3ab3341db61076f
diff --git a/sci-biology/seqtools/Manifest b/sci-biology/seqtools/Manifest
index 5d579cde9..cf9e73d2d 100644
--- a/sci-biology/seqtools/Manifest
+++ b/sci-biology/seqtools/Manifest
@@ -1 +1 @@
-DIST seqtools-4.34.5.tar.gz 5591057 SHA256 7677c61852db459137d541857314110f1a4450fb0f41d6d865d110e26d41e4d2 SHA512 9f4a521434e10fd1715f0b3ab228b955bf701fb355780a03a6912826a1bf3ad84ad0ead29a5d9abeb073a5ed045df92ec7b3e754570062c7baf9f4f7c82f0ce9 WHIRLPOOL 99e0c8e6412ab35bc7ba3f8eabee070945f10271f20abbb260ddeaf7bbf1b41d9d54e47fe6828553fcfd6b0eb8a01236994ff3c587a9d4854304f25a1d21e0c1
+DIST seqtools-4.34.5.tar.gz 5591057 BLAKE2B f3635f22d6bfb1226cbcdb478a43fec4843a24bf1822793a6e97c96399926dcebcb7ce7f142d81fa1fef712abf84e850a13a7291f81f739915d8f28cf1b86c13 SHA512 9f4a521434e10fd1715f0b3ab228b955bf701fb355780a03a6912826a1bf3ad84ad0ead29a5d9abeb073a5ed045df92ec7b3e754570062c7baf9f4f7c82f0ce9
diff --git a/sci-biology/sff_dump/Manifest b/sci-biology/sff_dump/Manifest
index cccea073f..7fe45fba4 100644
--- a/sci-biology/sff_dump/Manifest
+++ b/sci-biology/sff_dump/Manifest
@@ -1 +1 @@
-DIST sff_dump-1.04.tgz 55640 SHA256 94bfeb55bc146f2e0183a0b85622e3fa19772d4d2fb324332d72f4cc5a4104ba SHA512 e9d08a49425c57485642da2924ee8bcb785025193d91e2153437d7e7f8745d56aa1403a9ccc9d5189456a3b39fd04c78d69c0c0322a2916921ba2607de71e5e5 WHIRLPOOL 0820656e999bf14391fa1f97671fd97917882ea1e48cc9c5e9933b0c6fbf90bb41b8f4a071cab1b904072a13aeee7a23e8b59c040842859121d7f815ff780ef2
+DIST sff_dump-1.04.tgz 55640 BLAKE2B 7f222961a36622d0eb866f6a06758283f718ce1ae8998d4e37b594372d3d5397341ab3f67f2a5af6eb9fec9b5db4b65dac1a86e22910b47603607c5b66aa80f7 SHA512 e9d08a49425c57485642da2924ee8bcb785025193d91e2153437d7e7f8745d56aa1403a9ccc9d5189456a3b39fd04c78d69c0c0322a2916921ba2607de71e5e5
diff --git a/sci-biology/sgp2/Manifest b/sci-biology/sgp2/Manifest
index febfe6b53..be53bd01c 100644
--- a/sci-biology/sgp2/Manifest
+++ b/sci-biology/sgp2/Manifest
@@ -1 +1 @@
-DIST sgp2_v1.1.May_8_2012.tar.gz 3941100 SHA256 7b6b6feb338adab4917b20c27bd5e0c9801b4d0001b7802e418cf068403da6a3 SHA512 f32fcbb84fbcd67e0e4e7189bb73376232f2d5ff84ff453153adaa81b78b78b65657a1ac6102a180ec5f96bad22589a18ce1461237612f5e62a1a1ad576f4eca WHIRLPOOL adee6bf1abb4f4d1315ab9e83ec204474da8ae374ea672220022b3c29d0340a135a6ac5315f5e8512a6696abeaa1c0bd1d69c726a15c4566244df974da0e9ef9
+DIST sgp2_v1.1.May_8_2012.tar.gz 3941100 BLAKE2B a6310ff9ca17540ace02b3bd9f379654a0e7ce6cd0e1b7b2af18e7e1648b42f101baa82815a92d2574476d2d4f8db2e6325150ba9c73ef7f21394ece69c71c2e SHA512 f32fcbb84fbcd67e0e4e7189bb73376232f2d5ff84ff453153adaa81b78b78b65657a1ac6102a180ec5f96bad22589a18ce1461237612f5e62a1a1ad576f4eca
diff --git a/sci-biology/sickle/Manifest b/sci-biology/sickle/Manifest
index 570d99efb..f257e6e54 100644
--- a/sci-biology/sickle/Manifest
+++ b/sci-biology/sickle/Manifest
@@ -1 +1 @@
-DIST v1.33.tar.gz 631275 SHA256 eab271d25dc799e2ce67c25626128f8f8ed65e3cd68e799479bba20964624734 SHA512 94d9794861655c9d8688a4c71757ba93166f167ae529c5661998d287b93c6ccc9755d9e3db8d481bbd5dca4cf047f6266880a5fc1f8099e597bc857954404dcb WHIRLPOOL f54f911ddb58596c88aa2963a235a6c77f4b84d2c86f594329763c582763ffd7ccc86b28bf3d0126b9d8cd693c1a6cf1be05aa82d9521e5977b6ef0d01547a25
+DIST v1.33.tar.gz 631275 BLAKE2B 81ede2a0e6cfb64a0cc4754f094526cc516683845d1835afdcde9bcff90c2b98cac6c9fb74ead17495e7b80ff959ea4cb27d241259133b7cfa1a39ed658fa058 SHA512 94d9794861655c9d8688a4c71757ba93166f167ae529c5661998d287b93c6ccc9755d9e3db8d481bbd5dca4cf047f6266880a5fc1f8099e597bc857954404dcb
diff --git a/sci-biology/skewer-bin/Manifest b/sci-biology/skewer-bin/Manifest
index 6b0fa1efb..d9a0196fb 100644
--- a/sci-biology/skewer-bin/Manifest
+++ b/sci-biology/skewer-bin/Manifest
@@ -1,2 +1,2 @@
-DIST skewer-0.1.104-linux-x86_64 97877 SHA256 c0e8cf3530d7a34be23532eb975c1f56a27795aeb3bc75e554e88435bbe9a663 SHA512 c2a4b73c4a4c87528e9a33c16d839aa2a20771c34b38e0593ab3caf654fee47463c8eb63ceb29c6eee13ffc75657d3e69da5afc3c9fd86479f74a1888652fd05 WHIRLPOOL 9d9ca26dcf0bae9eef82d862404c468099cebb8a23edc3d6bcaf48d1afe7f95fff63ccf8d00c963a860157595187c99751b87d3279d119a17534655b92428d5d
-DIST srna-scripts-0.1.2.tar.gz 3811 SHA256 a9d6cb4f232dfa30fe6c74870b80ef5e0c4617126e8788d10a68b66eb0444303 SHA512 18b65c182cbd054a5ffada386cbeeb7ea26bab27e98e9586b9b30d68b028fc139f74df88a42d8b7142485e18b72d5275cde2dc3e0567a7567c514cb5459eeea0 WHIRLPOOL 2f03775fe510f35f53b4fbcbb5d1216aad33dc3ef080f852bfe92db608328d14bd3f966bf5410224ba74e615b70b4dadf399b9a483e03c3b4648c29ba94f3da7
+DIST skewer-0.1.104-linux-x86_64 97877 BLAKE2B a0c5bc4f675fa9c1688b06216d9e00af81d77d2f13dcc87cf7a66ee2cbcda79be8691c284b10bd559a61cac3fdbe22d533894b66ed6fe05ede8e98e667a28251 SHA512 c2a4b73c4a4c87528e9a33c16d839aa2a20771c34b38e0593ab3caf654fee47463c8eb63ceb29c6eee13ffc75657d3e69da5afc3c9fd86479f74a1888652fd05
+DIST srna-scripts-0.1.2.tar.gz 3811 BLAKE2B e0dbed1bd81deaed675b5b60af165bb3f1906c91f11b90e725977cf12af8ed57f2fcbc5e83a37425980f6efc3fd3174e844e02470a2a637706f1c1d4c7f43a68 SHA512 18b65c182cbd054a5ffada386cbeeb7ea26bab27e98e9586b9b30d68b028fc139f74df88a42d8b7142485e18b72d5275cde2dc3e0567a7567c514cb5459eeea0
diff --git a/sci-biology/smalt-bin/Manifest b/sci-biology/smalt-bin/Manifest
index 0e8053bb2..efd02e592 100644
--- a/sci-biology/smalt-bin/Manifest
+++ b/sci-biology/smalt-bin/Manifest
@@ -1 +1 @@
-DIST smalt-0.7.4.tgz 1437480 SHA256 a6997fcbef746c57f889c3784b2bc9c399ad03562ed8d4a835180ba8cc6822fe SHA512 9c31f358ef4094566bdc67f92b2576e6cf15a010bbf7dc1eb4a66afb2107253dfe4947a529c10c579484ccd7aff6aaae048ea8b17fd468804b08d88fb6588e39 WHIRLPOOL 65c1a52608d26e3411a77137fa03c65ae30cc845d5e9f676ab4c1a53812f1fcbd2300b4e5a0a8839c24c00f526f0a5627b6facbec54cbe86af7d132857b728c1
+DIST smalt-0.7.4.tgz 1437480 BLAKE2B 72f94cc403a1fd364bed8a170e6a2dde6b679482b6845569fc2a3e9fa342e32fb84713b8a1de843d355539d046772ac055a33d0b3ba6a017a81953d71ce91086 SHA512 9c31f358ef4094566bdc67f92b2576e6cf15a010bbf7dc1eb4a66afb2107253dfe4947a529c10c579484ccd7aff6aaae048ea8b17fd468804b08d88fb6588e39
diff --git a/sci-biology/smalt/Manifest b/sci-biology/smalt/Manifest
index 2afabbaeb..f2fbc1389 100644
--- a/sci-biology/smalt/Manifest
+++ b/sci-biology/smalt/Manifest
@@ -1 +1 @@
-DIST smalt-0.7.6.tar.gz 72290533 SHA256 89ccdfe471edba3577b43de9ebfdaedb5cd6e26b02bf4000c554253433796b31 SHA512 3b4bc9c75d954eab293170094f10728723caebbef8d06cb7c62eb234bff1a4986ea6e1131d90d8837fb9d1347391f6a9cec4a749f0456978b3c452edb31abd0b WHIRLPOOL 8744588af1cd7477ffb4db75046e895bfbdf2e6ca987e42f8f4a04ce18c7cdd4d71914b316af3db53ba731686b92592be41b5c48bead8c0da9eb4cc64fa2599c
+DIST smalt-0.7.6.tar.gz 72290533 BLAKE2B 2b934e9a4121180703360f817eb83d2096ffe20aaec997252a2a66e37e1ba85c76fe16f9e6b78224bee0d4ab583ea9c861c0d7b19e9f7cd71ff25b7616a66be3 SHA512 3b4bc9c75d954eab293170094f10728723caebbef8d06cb7c62eb234bff1a4986ea6e1131d90d8837fb9d1347391f6a9cec4a749f0456978b3c452edb31abd0b
diff --git a/sci-biology/snap/Manifest b/sci-biology/snap/Manifest
index 3d7ad61cf..7294b5750 100644
--- a/sci-biology/snap/Manifest
+++ b/sci-biology/snap/Manifest
@@ -1 +1 @@
-DIST snap-2013-11-29.tar.gz 703047 SHA256 e2a236392d718376356fa743aa49a987aeacd660c6979cee67121e23aeffc66a SHA512 162c39701d72fe6bb6e9941178593c9c0aeffb6fb197f7a456cdaea63d0beb4b2f03919f3659151250d571eeafffd4aee275224bb8cbf22ee1a48a92f4866d7a WHIRLPOOL 5207fbd779a1f53ae5b08a02811868067a4abd0052e8adea732c59af79e04bcda90270ee83e62883664c3e242dfc63561a83e9f4f8f3c12e53ecc265038f4b91
+DIST snap-2013-11-29.tar.gz 703047 BLAKE2B 14609363513c7b3c351ad52fcf3c5e6049a4626c5d18e76bc71c986a35e539fd880cb9548cfe5fdb2ea7c8f03475741ae6afdcd7b7551f4d68fd5ad0d733cc0e SHA512 162c39701d72fe6bb6e9941178593c9c0aeffb6fb197f7a456cdaea63d0beb4b2f03919f3659151250d571eeafffd4aee275224bb8cbf22ee1a48a92f4866d7a
diff --git a/sci-biology/snphylo/Manifest b/sci-biology/snphylo/Manifest
index 4c31433c0..e373a86f0 100644
--- a/sci-biology/snphylo/Manifest
+++ b/sci-biology/snphylo/Manifest
@@ -1 +1 @@
-DIST snphylo-20140701.tar.gz 19522 SHA256 adea6dde1a4f1edbbe053cf97618528d2fa8409847fc5865327861cc601619aa SHA512 575c97caf01126dea194007494c783de69653b468964c8f0a004a93c8b33deefd9d79a0e02841814bcceda69bed29fd3343ca492c7f71b46c55139acf4f0a3c6 WHIRLPOOL 6a1667a8cec6e92135135321275e6929e286b1dfe18f661a6ca85cdf75d9f200de194aa7fa94b7dc1e974e7ca29c9e0a2e11cca3af8e158ca6a6b659c8b0b8f3
+DIST snphylo-20140701.tar.gz 19522 BLAKE2B 9355ba532e30eaeb45e8a5e9f569d281eb0c4064b9d84efa3faadc26fc463ea83af4202d17f650f380e793ba5900d9b783d3ddb1013ad22862c6efe51de8c26a SHA512 575c97caf01126dea194007494c783de69653b468964c8f0a004a93c8b33deefd9d79a0e02841814bcceda69bed29fd3343ca492c7f71b46c55139acf4f0a3c6
diff --git a/sci-biology/somatic-sniper/Manifest b/sci-biology/somatic-sniper/Manifest
index a7055a373..699c88287 100644
--- a/sci-biology/somatic-sniper/Manifest
+++ b/sci-biology/somatic-sniper/Manifest
@@ -1 +1 @@
-DIST somatic-sniper-1.0.4.tar.gz 1985061 SHA256 7f82e6e0bf2831b87d558617e749287241e654e3d1b068fd6aa2892b25763db2 SHA512 ce6093ba5d853f6ed597cf7c707a52dce7121c7b0b5f6c18ecf3c9850ae41c1df062465390085411669f528c2a85c106a8cb60c0bc39b8d3e3a6ebd644800445 WHIRLPOOL 8204644cfa657b291938aaaa2df50962de5ad534767893e41e01da43a51b42cc7bc5aea883a72ae7e2e22034069df9a63b7a18fec49fa8e41b0d86e632fd81e6
+DIST somatic-sniper-1.0.4.tar.gz 1985061 BLAKE2B e721656fc6429d66dd2dbd9d27ae9a1f75df7a54d302f6583c664c99950882ab6ad14e5338ab6b39aa879421cc7ba0247e9d3e159d63ed65560c9dfd2ee48748 SHA512 ce6093ba5d853f6ed597cf7c707a52dce7121c7b0b5f6c18ecf3c9850ae41c1df062465390085411669f528c2a85c106a8cb60c0bc39b8d3e3a6ebd644800445
diff --git a/sci-biology/spm/Manifest b/sci-biology/spm/Manifest
index 44fa14de8..97b25b3bd 100644
--- a/sci-biology/spm/Manifest
+++ b/sci-biology/spm/Manifest
@@ -1,3 +1,3 @@
DIST spm-12_p6470.zip 97172673 SHA256 0231fab7550de2881988161d7d644e67b3a982dc7dda23873972d48335a049cb SHA512 b636b261ddf112fd0f38ffc16c5b996609683d93c9ff6bdbce561226488b2aefbc2153f58f450b48ab5b889c87504aaa2b149ef6ae33bfb965fe7b8a7604e7f6 WHIRLPOOL 7c21096d2725877f9b05a01ae4bcfdaa672cf593c74c578c991aee615835d8626579078468e9358e0e8ca41e2388ff8a4416fe944f8ebee61741594795c7e08d
-DIST spm12.0.zip 93842449 SHA256 ca0679a2d416e4212c66dc0c9ca9729601c75a9baf22cc68bfa72e7cca999eb4 SHA512 d09267360c3d67ae0b462f47c9b4445c4970524c60cf80e96afc035087e2212050ab7422957525aeb67f6853dd9ba3b9ee5cfe2e26afcec2e1ea7bc2f5828e4b WHIRLPOOL 3378b6518b0f9f4b251f2412936b08ed6023053e7e24566f1d02acf8361079b3994de1f2f7b13f32f8c90b4399773ea225f7c0ddf78c907982c47e167fec6786
-DIST spm8.zip 92048821 SHA256 43f952eb11435454510ba8ca4111ded28c845455d03a7f420ec492dbeb12a499 SHA512 da942841bbac74461950639648aeb4f8aef1c6229f3b30a47713c158bf9751dcec0d825b7d6349c03eab1ee91467f86e0c504c761ac1094343718a373effb451 WHIRLPOOL 07c5bec3f48271f40f182e2cc0b2cc65ffe2657be9fe46c6e98d68d40da902b38f773a65dea9915600f903b251813bf5447bc1bf5ca313c9d502bb6914c9a8f6
+DIST spm12.0.zip 93842449 BLAKE2B 3b942fc17f9b584ee4a7a0f09d6435a635a718f217e84c8775b0ad9b50b632aa964b07ee96313a235bae62ad6fe0f81d41292181383b79fd9defb3d1eccaa5c6 SHA512 d09267360c3d67ae0b462f47c9b4445c4970524c60cf80e96afc035087e2212050ab7422957525aeb67f6853dd9ba3b9ee5cfe2e26afcec2e1ea7bc2f5828e4b
+DIST spm8.zip 92048821 BLAKE2B 97059a284b7eba4c063ef97bedf877237f8afea4fdc1aa3a877d8b73bde743dcfab2ec687c0841910f8a363f50c567bdc381a0e0ab8315d9c6aaeaa7afcbe1a0 SHA512 da942841bbac74461950639648aeb4f8aef1c6229f3b30a47713c158bf9751dcec0d825b7d6349c03eab1ee91467f86e0c504c761ac1094343718a373effb451
diff --git a/sci-biology/sra_sdk/Manifest b/sci-biology/sra_sdk/Manifest
index cdda86b52..c334775e0 100644
--- a/sci-biology/sra_sdk/Manifest
+++ b/sci-biology/sra_sdk/Manifest
@@ -1 +1 @@
-DIST sra_sdk-2.2.2a.tar.gz 5105408 SHA256 c5fc85c435e86325f4c2d2124c790121a6c22168958faee3fa0a59fe47d7f120 SHA512 748b4892383255da424f50d6757e87e1bea4bc07e2b0dce4ea34fc143b660ad35f06955d75ba439f17223965db93f32f1163118bc68f4fe955c98dd9f5be4c6e WHIRLPOOL 19c971b21a0771e6cc013f9f41977294c63ee62f1be643efdf553e97d16468e2c3d96692cbc506a42549d1835d0d1272306e44682c680890b7a479d11101fecd
+DIST sra_sdk-2.2.2a.tar.gz 5105408 BLAKE2B b124251d0172831199697a043f53059f35dcd20757632542a92d10c15dad66ee7ab8b24f55f8a58b0edf81bf93d409db5ef159c93ca5f69cb7b6066802c5eb7d SHA512 748b4892383255da424f50d6757e87e1bea4bc07e2b0dce4ea34fc143b660ad35f06955d75ba439f17223965db93f32f1163118bc68f4fe955c98dd9f5be4c6e
diff --git a/sci-biology/ssaha2-bin/Manifest b/sci-biology/ssaha2-bin/Manifest
index f1a6a5db5..e68a7bcf6 100644
--- a/sci-biology/ssaha2-bin/Manifest
+++ b/sci-biology/ssaha2-bin/Manifest
@@ -1,4 +1,4 @@
-DIST samflag.c 2424 SHA256 945958214ef1adc40029a6b3c323c37338e095e9e2bcbff5e5ec05aadbdb67d0 SHA512 50ef4d134e5fab4f1399fd2eb35de0c8ce901c23e360a52ee5cdca117c124c77f432a50a666d655dc0f04089db84d873f9251e68ff6f6f4ac327e23362657aa7 WHIRLPOOL c89abd1bac315aaadfc4456c4ec4252a6ccdd1f42db604b60568d3ee7e367f8ec99ff7915aeaac7dafa594bd29bb11affb3f62ed9d6dd577dd407c2c4c93e7c5
-DIST ssaha2-manual.pdf 163188 SHA256 1a0529168b71ac55e13b34264a854daa6a5dac9468f81ccb5b63bd5e1baafdbf SHA512 2a43d038684519d3a4e1fca54b75ac731961dc1e9e1034914eff481b303e5b49d11f4d9149e56a6e06292107f5be3ee6357bb9ec508cdb4de1fac677fade5d0e WHIRLPOOL 25040635acf63d874c453d5e2c2bb93dd2f44537c79ce5d3109bd59a345cbf41e4106b05039a8d3e0b00a8e1bd7a66d923161b8f0fe2544f10c37f5a4bfbbaf9
-DIST ssaha2_v2.5.5_i686.tgz 1045230 SHA256 b66ddbf1374cbcf583ff5413cb7c17dd0e63c2372d227c26526fa79597cb39c8 SHA512 e5611a2b382348e84b7cc40496b42d78ca1b5a5d641acfdb1371bff79dbe055f8c22db10b3a428d7943a6824246141e28e71146722a613585d82034187d81e32 WHIRLPOOL 169d316e548a4cc223755534b235163f0356129b6aab44540cbe5eb6083ea46f47ee689097301ecc86974da8a7b21f5887db8e88b772668c3049de31120581de
-DIST ssaha2_v2.5.5_x86_64.tgz 1167987 SHA256 478bdbda9d5fe36278748e571299f5eaf39d5172758cf0d0a85fa750f84667d4 SHA512 483dc726e1ac52020481a5721e0ac870fccdec22d9f7e74bddc76cbb76bd10ceccba57ecab9e2787045cde0e6cb74186bd3769e5c7222eb15e9c445ba7ac2592 WHIRLPOOL dbde27ca5e2eeba1c44fc59cd66f1ac6c6fa52647174c184521cf88b9ae8b05633f2fc1bc93b3be6e07e499832ec0938c4fab1017e53706b51c78060f6590b01
+DIST samflag.c 2424 BLAKE2B 4ca9196f029b7d00d54922366e56a496e761f33fa016f940703bff3b1f3b3091a4de8bbb13016bad8c3ac5f8966015ce9d36f95b56838f81b26d6551fb27749d SHA512 50ef4d134e5fab4f1399fd2eb35de0c8ce901c23e360a52ee5cdca117c124c77f432a50a666d655dc0f04089db84d873f9251e68ff6f6f4ac327e23362657aa7
+DIST ssaha2-manual.pdf 163188 BLAKE2B 4cf287a26e36c2711d4cd14954969806ebf5abd47119bf5bcf63ecc8f820080d7fe2d8ddffb52f29a1fc5e66d083e9975a3b86f9fab4f8128583a80d021d1d25 SHA512 2a43d038684519d3a4e1fca54b75ac731961dc1e9e1034914eff481b303e5b49d11f4d9149e56a6e06292107f5be3ee6357bb9ec508cdb4de1fac677fade5d0e
+DIST ssaha2_v2.5.5_i686.tgz 1045230 BLAKE2B 79a42375c86392c341be39a4103a9d1edb83dd22e28a1e08397091ce848ef0c927ac7c024533558e6e47ca05f2226d1d62b28b3a2a3053db4ee18fe81d7a052a SHA512 e5611a2b382348e84b7cc40496b42d78ca1b5a5d641acfdb1371bff79dbe055f8c22db10b3a428d7943a6824246141e28e71146722a613585d82034187d81e32
+DIST ssaha2_v2.5.5_x86_64.tgz 1167987 BLAKE2B 82cb50cbfb1a555a692dd438a7d894828227936ff1b06c547b482ea76e00e6321cbc3c0e0cc21819e53de25d5312e7d4d2050c3852d9ace60482959953d1256e SHA512 483dc726e1ac52020481a5721e0ac870fccdec22d9f7e74bddc76cbb76bd10ceccba57ecab9e2787045cde0e6cb74186bd3769e5c7222eb15e9c445ba7ac2592
diff --git a/sci-biology/stacks/Manifest b/sci-biology/stacks/Manifest
index 3064026ef..a71ef0cc2 100644
--- a/sci-biology/stacks/Manifest
+++ b/sci-biology/stacks/Manifest
@@ -1 +1 @@
-DIST stacks-1.44.tar.gz 904141 SHA256 1eb39095e5f73fd44959824adcb948f16a88e20aeb376db4b5e26e5d2f88b40b SHA512 fd89b8fab3519e9b7c6387574cc13e46800a97627f580e5d5a9841e8d09327ff1de2b91d4e6de78748febcdd9314c0f4ac827f8cbcacdd17aca347e1541eb867 WHIRLPOOL f43668cda53ebbe2f0952a99f72b8439b770538e86f94ab94f7aaaf8b8c246c522d2197c032ec8eb4a8e3ae89a4d17969c89fd14ef3f6a88199ffef6ddea74f2
+DIST stacks-1.44.tar.gz 904141 BLAKE2B 787bfdc3ab44519dfb5372f13de9f629b8d5b67b999b0a4d4555b3071ffc392682ad4afd2fcbf1fba96ee491930901379ae8063cfc46278df613c20b76a92341 SHA512 fd89b8fab3519e9b7c6387574cc13e46800a97627f580e5d5a9841e8d09327ff1de2b91d4e6de78748febcdd9314c0f4ac827f8cbcacdd17aca347e1541eb867
diff --git a/sci-biology/staden/Manifest b/sci-biology/staden/Manifest
index c4e45c82c..6800d9339 100644
--- a/sci-biology/staden/Manifest
+++ b/sci-biology/staden/Manifest
@@ -1,2 +1,2 @@
-DIST staden-2.0.0_beta11-src.tar.gz 4754651 SHA256 cd7ee17626c25bc845ebd3f6311b5a538815fb73a0dfef2393001bf579ac9649 SHA512 6f85cc3aa3b909431333a4998566b267f1d344b3160603604306caf41504cc36c05980790bf5a8f2b4a53f7aea2a369ffafbce163b41c3ea94605f7fee07a26a WHIRLPOOL b1fd03b3d5cc533a3c090194152e8583a8f9e9f43ee35cd1fe3c1e42e2cef682664340e301649226fd321bb8c306f95cceb742be3977ee3e8aef366c1a35874a
-DIST staden-2.0.0b10-src.tar.gz 4616845 SHA256 099efd84a208ec9efa3669803c0ca6f09960d760886fa3990dfa5cf9d0c112fb SHA512 6ed8316a4cd9631b1aa632dbb51c190044470898404c0cf6dadba9acd4d36f8ecc36babce00ca44d0987b9e69a457f9a333a6711d4e2cec8a9917037deda72fa WHIRLPOOL 83d896f0e7d5ee1061d8bb0463f1fbfbed6a7df650350ec825eced30883be3e3e1a447ddde2e11fd77d7044f402e015dc01df3272cae21e4538fdd0e36c3cf1f
+DIST staden-2.0.0_beta11-src.tar.gz 4754651 BLAKE2B d55dcff2192a5f6c505d141960f624ad30afb358e481c438d285a267bb116f8e26e1b7d6562c222b4c7392729bacd14524ee9275ada5201b7d8bcefbd244112f SHA512 6f85cc3aa3b909431333a4998566b267f1d344b3160603604306caf41504cc36c05980790bf5a8f2b4a53f7aea2a369ffafbce163b41c3ea94605f7fee07a26a
+DIST staden-2.0.0b10-src.tar.gz 4616845 BLAKE2B b1a401d28e14d2a480eecf8b9d016a3b87fb0552c7533bccc127ae0436d96f52fba8ac43980f73e02deb9b2ec72d80d5be37b8b1438f93baff9978eb001a1997 SHA512 6ed8316a4cd9631b1aa632dbb51c190044470898404c0cf6dadba9acd4d36f8ecc36babce00ca44d0987b9e69a457f9a333a6711d4e2cec8a9917037deda72fa
diff --git a/sci-biology/staden_doc/Manifest b/sci-biology/staden_doc/Manifest
index 2d284a731..c991e8f5f 100644
--- a/sci-biology/staden_doc/Manifest
+++ b/sci-biology/staden_doc/Manifest
@@ -1,2 +1,2 @@
-DIST staden_doc-2.0.0b11-src.tar.gz 3184526 SHA256 a3b2e6b6276c269bd04d705597e91c12edc1372de7f6aa5c4d32276fbddfadde SHA512 ca8aad2ab3ec660dbd8631bb65df95b10fa64e20d5d509925a03e277896ed8a2eebef89f6b170fe2acd0dd10e0075585620dd162b7b5c9153b248ee6dedd6ef1 WHIRLPOOL 6df048c09372eb68614393ca3eaa0a48604801cab9a1b05763c75a2459f22b2ac748534d55667f2ed6b7ab9e09ec0b4154bec11ded1bb99312e956e2ffeb99fb
-DIST staden_doc-2.0.0b9-src.tar.gz 3181687 SHA256 942a560e22de0fd0da8856d2049fba1703ea042e7ea5b80e277a2d57d7fe4cd4 SHA512 9f1d1ec7f8301058574ec7da604274d1767258293c88f6cde6426ad361a8543833fa4b755e5f0109ca4dd88ea41cd7fa94f2f7e14a4d9a516ec06ae49540c15f WHIRLPOOL f5adfdd6868d565c2269b13a45ae7d19a369f61679ac918aa8e02c64667e3117fb5a4efc717d06a8bf538c75a29a24580663308ca87d4192d837c9298a5808d2
+DIST staden_doc-2.0.0b11-src.tar.gz 3184526 BLAKE2B cf67f702efd0743899b0f955434b815bdb695d28641069a4da981e5fe5de9091980b997e55d10897ff21fca1928f1afb787aa9a89d66ab658b14f8db9b35d110 SHA512 ca8aad2ab3ec660dbd8631bb65df95b10fa64e20d5d509925a03e277896ed8a2eebef89f6b170fe2acd0dd10e0075585620dd162b7b5c9153b248ee6dedd6ef1
+DIST staden_doc-2.0.0b9-src.tar.gz 3181687 BLAKE2B 97127dfd01737ac27aedb99b3d07cf6fcd65ebc9c0c0747fb115a55fdacaf0c2dd886f4ed0a845acf6801f32c12e15ec8cf514c5edad013fd5c97de152acc2d6 SHA512 9f1d1ec7f8301058574ec7da604274d1767258293c88f6cde6426ad361a8543833fa4b755e5f0109ca4dd88ea41cd7fa94f2f7e14a4d9a516ec06ae49540c15f
diff --git a/sci-biology/stringtie/Manifest b/sci-biology/stringtie/Manifest
index 05594a505..74fcf6481 100644
--- a/sci-biology/stringtie/Manifest
+++ b/sci-biology/stringtie/Manifest
@@ -1 +1 @@
-DIST stringtie-1.2.2.tar.gz 410898 SHA256 e0ce82c447a752f95c4ed26cffd22fb40a9d3664ff879f4861754dd908e257bd SHA512 b84d30dc84d4e4793619ff50751b7918e410adfafdc7cfe3e08c9b51e6a09c952e430d799d3adbd003089f1eb58d7ce9e428f24ba44529d3ef1b5ff7aa43da8e WHIRLPOOL b9e6a4e3735f89c1a22f24ed8d23a957dce22bd52718d76c345bcc9277aa1d8cdb8ca5c5941dd21a0c05b216fb5d483f865659daf45715dc2207168289acc72d
+DIST stringtie-1.2.2.tar.gz 410898 BLAKE2B 78525aa436b0b2fce4a12fca3adff4972cab887bfca18d992a16b70e168832d831365f22e6a6eae5974883ff2be8dcb82e5e4972fe3f5b6c53f1912486f96031 SHA512 b84d30dc84d4e4793619ff50751b7918e410adfafdc7cfe3e08c9b51e6a09c952e430d799d3adbd003089f1eb58d7ce9e428f24ba44529d3ef1b5ff7aa43da8e
diff --git a/sci-biology/subread/Manifest b/sci-biology/subread/Manifest
index 8f63ff4cf..dc31ef636 100644
--- a/sci-biology/subread/Manifest
+++ b/sci-biology/subread/Manifest
@@ -1 +1 @@
-DIST subread-1.4.6-source.tar.gz 20173034 SHA256 930c1cb7e22236556e6f42499871a9bd11caa59b42da241e719f28a993afe508 SHA512 48636244d814ac985ba7ca2d1e54882b59c47145392958faab5680104ec2b35c7106d6351dfac675bfb5c5b8372e43585c603f76d830e3ddb25b6747a28b0132 WHIRLPOOL e7e684077de905fded06510787ce0f26c8e61a958ac01964c48d1cd67f47723300d237f0fd98f6ccd5930ebf8d47e050c09a06fd8e75b99686854db288b8f7b6
+DIST subread-1.4.6-source.tar.gz 20173034 BLAKE2B 28bac4ae6b2aad2b765f2849f18dd9cfc9dbe8541b5c05943f313c01fc7b5ed5dcf10e6ed6bdb4738814b86a5273dc1a55d23638c47cc407c76de45110ff8813 SHA512 48636244d814ac985ba7ca2d1e54882b59c47145392958faab5680104ec2b35c7106d6351dfac675bfb5c5b8372e43585c603f76d830e3ddb25b6747a28b0132
diff --git a/sci-biology/tablet-bin/Manifest b/sci-biology/tablet-bin/Manifest
index 8fd1e6e25..912a58142 100644
--- a/sci-biology/tablet-bin/Manifest
+++ b/sci-biology/tablet-bin/Manifest
@@ -1,2 +1,2 @@
-DIST coveragestats.py 4800 SHA256 358b686d00fd75d2cc9af490b0e7d635f74cbb1c0b153df22d8ff879884d47bc SHA512 d5688832c13dc9c2e2e015df0b5c50113f72e2eeae076d479c43b65a4b028f8dcfa5f0fb833b4341d76d3956ea27707c55a51389b73a2efed6abd2b96ccdc3cd WHIRLPOOL 0b1eb20189b343d6014097748c053f35f8ad162400312cfbde16bac7fee52f24ac8b0055e991c823dcb64d7a20df3fbb88d8cd6119f838d4e9a5f26e82604664
+DIST coveragestats.py 4800 BLAKE2B 58f3c1e6b08d77b261aaa7462a840d9be77ee129ec3ddc410c89d560063e3d85fffe65f2c96a7dbca6be38cc5d1e4568d8d9711876f2b2f0fc41cb5b40261f82 SHA512 d5688832c13dc9c2e2e015df0b5c50113f72e2eeae076d479c43b65a4b028f8dcfa5f0fb833b4341d76d3956ea27707c55a51389b73a2efed6abd2b96ccdc3cd
DIST tablet-bin-1.16.09.06.sh 53992010 SHA256 52a8d9a47d8f3bafdafedecaef48d67e21b7bb08b714de16dd39b964cd2d7b90 SHA512 da57de45ad2f9a5f1fcef625a67db435114186e5375cbb7bd69de1f243aa6281ec7caf0d6ddb361fab655b4c335fb34f5bdbe3f285c0df90cbf167bf13b9586d WHIRLPOOL 5c554c7ae9e511eb924017f637803e4350df672f0743fbe381c858c8ea9e67fce1a54b06b18d6b06926cc3d1fe3fbfd6edb3056449e40302732844be990284d1
diff --git a/sci-biology/tagdust/Manifest b/sci-biology/tagdust/Manifest
index f6928f006..f9a18f2b1 100644
--- a/sci-biology/tagdust/Manifest
+++ b/sci-biology/tagdust/Manifest
@@ -1 +1 @@
-DIST tagdust.tgz 313456 SHA256 2885523a4b74d531e1db269d667f2195281202ea352a20c0e5f29f9610c1fd1d SHA512 c792c241e702a33d851f0897b98494277441247973df84e90c1ac730b75a656d147960dc5619ba78a8e4f87953c64d9ce0067cbb83c0b19438bf4889b07a2c36 WHIRLPOOL 559e9650b24a3dddd86fec62deae234d8c87d950db18aa44b9aae57c0ba052a2fc66d40b4ca56b85bc0fa902a3e42d459ee310df158a45fe631e2b0fe1150cbe
+DIST tagdust.tgz 313456 BLAKE2B 63f7fb2a122664dd230f74bf000fec27458e3559538a1abef5d79a6c18fa9a53c42c629c2ed8179fd306f1c89537c73e4f534772688ae5dd0f6f7975fdd8658f SHA512 c792c241e702a33d851f0897b98494277441247973df84e90c1ac730b75a656d147960dc5619ba78a8e4f87953c64d9ce0067cbb83c0b19438bf4889b07a2c36
diff --git a/sci-biology/tclust/Manifest b/sci-biology/tclust/Manifest
index 76c50c4c8..2ad5e841b 100644
--- a/sci-biology/tclust/Manifest
+++ b/sci-biology/tclust/Manifest
@@ -1,2 +1,2 @@
-DIST gclib-110625.tar.gz 82727 SHA256 0c7f21fc92b033cd442b672e9014e3ffb9f2de97769ca525715692ed9359439b SHA512 a6819e6dcb092c13b4f5da7eca6c82a9a46b512aeff2596cb4b921aeb8088c40bf2283be66862ab4d2195062b8126169e02945bcf4c8d4f118fa1e34bccba197 WHIRLPOOL 575ef5382cb46d4865523549d36dcb0785f0a99723b1286f9f8d247939957fc2d43951684f5a94bbf134befb8283fb7d0642f308b152cbd5d9453ef2dcfef09a
-DIST tclust-110625.tar.gz 9521 SHA256 d222a7109ec135d5e80767046c47aa6d4201ae779e5d516771b377dbbd261798 SHA512 b61497340c3bac08de2b5db4c16e9c2bd616651a1d1ae8ebfd9d2c3e2c4a436aba094e179e669d18cf4069c29c6ea5f75fca45fdc84660bc75ade9c5c5cef451 WHIRLPOOL ad99376c487169f11e28f61ce361d02da316ea0f9dc81f7e0c79c2cf85cfc2b207fefdb02cc342385ef22efed49b7e05336a1e042c9f5b3132e620f2dec8d568
+DIST gclib-110625.tar.gz 82727 BLAKE2B b99a89d39ed76c643a9e379cb7294c63ec0d186a106c331f6ff4df6a40fcc5585f81e4c9d6015af434e2a75ea46e0e3783dda627abae32276ce9204c719bef2f SHA512 a6819e6dcb092c13b4f5da7eca6c82a9a46b512aeff2596cb4b921aeb8088c40bf2283be66862ab4d2195062b8126169e02945bcf4c8d4f118fa1e34bccba197
+DIST tclust-110625.tar.gz 9521 BLAKE2B a37acdb940f8666c53e357fa653c61c074afb82a71b120afd0fa9e4e90591144964edeab3ecfb5cb3be29fb7474b438f0fddd961f7a702ab3e4ba3011f622327 SHA512 b61497340c3bac08de2b5db4c16e9c2bd616651a1d1ae8ebfd9d2c3e2c4a436aba094e179e669d18cf4069c29c6ea5f75fca45fdc84660bc75ade9c5c5cef451
diff --git a/sci-biology/tigr-foundation-libs/Manifest b/sci-biology/tigr-foundation-libs/Manifest
index 54e3337d8..f139c2aeb 100644
--- a/sci-biology/tigr-foundation-libs/Manifest
+++ b/sci-biology/tigr-foundation-libs/Manifest
@@ -1 +1 @@
-DIST autoEditor-1.20.tar.gz 2438903 SHA256 c0c399eda52a10deb0e0362b4caf909014768a4d08e90c900392cdf712cefd66 SHA512 8599168296ead35621d1e6cd159852e7a05ce2f6de38d70058900e0a4d701f4aa146381221bcc0e7e63844f14141ff86c2d81c19d14a8e4a3e836186349dac5d WHIRLPOOL 79c698d1e19eed9571c9dee20234f0e2f99e90e9545f29c285703395009c06f63eb09d674d0efcfc7228f33584c7652557a4140d8ae9ab4dc80fc8a8661e2fe2
+DIST autoEditor-1.20.tar.gz 2438903 BLAKE2B 91b0c943fd3eb202188cd90cf290e2624ad5c27e9302bd93ecb2b4330a9dcc9b584c2023fb3ca2b9ccf6abf705bde0b3144f1ad48661113750d325969af631e2 SHA512 8599168296ead35621d1e6cd159852e7a05ce2f6de38d70058900e0a4d701f4aa146381221bcc0e7e63844f14141ff86c2d81c19d14a8e4a3e836186349dac5d
diff --git a/sci-biology/trans-abyss/Manifest b/sci-biology/trans-abyss/Manifest
index 854fa7320..647c12f67 100644
--- a/sci-biology/trans-abyss/Manifest
+++ b/sci-biology/trans-abyss/Manifest
@@ -1 +1 @@
-DIST trans-ABySS-v1.4.8_20130916.tar.gz 1861658 SHA256 c25dc252b12b5ff25853f05cca49a191ab9e4192e696ffdf993cab6c48a1a7f0 SHA512 ad4c72401097385c6c80830bc4d43ccbbc634101ed1e6e397d710d5d0a24ec19d2239739bd5b8c2591a8d8a889c46cf05d013dfe015b0a0fcf32223200d8c4b3 WHIRLPOOL f37ccfae17251f210a15b27ebdfc296fb4da6c63235e48aed97b77e0bbeb4bc2a755663d32058d9a4d335116a92d5c53fe1c983f55efa4cd4fbc692482302945
+DIST trans-ABySS-v1.4.8_20130916.tar.gz 1861658 BLAKE2B 922a23bcbbfc1570c229e70e272f779f344f7307c00913f36d7fd427a049007e1069fa4cf11a9c85c87bb16c881822f5e8eeea383a0a920a29bd772ed508e9d1 SHA512 ad4c72401097385c6c80830bc4d43ccbbc634101ed1e6e397d710d5d0a24ec19d2239739bd5b8c2591a8d8a889c46cf05d013dfe015b0a0fcf32223200d8c4b3
diff --git a/sci-biology/trf-bin/Manifest b/sci-biology/trf-bin/Manifest
index cf6548e47..a02d742dd 100644
--- a/sci-biology/trf-bin/Manifest
+++ b/sci-biology/trf-bin/Manifest
@@ -1,2 +1,2 @@
DIST trf409.linux32 116944 SHA256 09da272ea67fbfac67e65050d2c95f3f739b73cb8087ad569654f326988bda3c SHA512 41397d9973b93b58532d2a16d4fa19f21863da233abc17073a52909676f7a45a7bf3dbbbc58b934de9428b1067d9fadc825a6a6d1d99aa93ebe6d3d4b0da81fb WHIRLPOOL f6c315363bde49b79e4f02a65c38d197621f3ae1de1ee22a6e813cbafa60043858993b0eaac1ae7e5360ba75a4b3282cef09ad1c603235dc3f86fb332a875585
-DIST trf409.linux64 116192 SHA256 536092453453e5ca90327434cc7a0be88e9f40eed17cd15c43d3fb61246af765 SHA512 1d90c7901e4487ab12ac99669278740d2ab3bc640298ef371cb302f4de51caaa048971666a034df1304a0292716c2c29ce7e40b8a5b2a145ce4133f99aecc86d WHIRLPOOL 9739265c7bd4302ee4c1e05e3ad35a9285c905845a08a11f118914d0748741fdd4ff0b58219ede7ea674efa489b82e19fb369dbf1c0ab4fa42013e9b0e86f90c
+DIST trf409.linux64 116192 BLAKE2B 5fe1b0199adb70a1729576b55d18fc777ae4f2020d5aae120abdd234e8ff0dea77d01863c89acd04f6fed50ecf55a1e66a319e1aae7308f98442f13d3981f822 SHA512 1d90c7901e4487ab12ac99669278740d2ab3bc640298ef371cb302f4de51caaa048971666a034df1304a0292716c2c29ce7e40b8a5b2a145ce4133f99aecc86d
diff --git a/sci-biology/trf/Manifest b/sci-biology/trf/Manifest
index b9c7d08cd..ac58bc510 100644
--- a/sci-biology/trf/Manifest
+++ b/sci-biology/trf/Manifest
@@ -1,4 +1,4 @@
-DIST trf.definitions.html 7109 SHA256 4b9274db5ec68fcbd253227db3dd41bedc53f93dbe0d2975992e162bc3ceed09 SHA512 06ac7aaa76b8a2323b35e2ac4faa545f7ecb8ac51aab4ebf34aa9ca3d25e8d8f04f33990d37fae17863b8f6ba27bea2fc8dc2ce36f3e16a4aac1f5205cdf2c1b WHIRLPOOL 24c4a2593df71612948fe20a8f0a163d851be72e9709f6d46efd912ec3c3a33d4d19db6262bc3c54ebe36be1b41348888bca3420586aa48c494784d9d060bae7
+DIST trf.definitions.html 7108 BLAKE2B f01da2ad7328721f28b7d643e98110843dd2d65f2bf634a0146796f3136814e32e5e748921f24a1a63d46cac325f61c4f862462399ae1337cb828853a28cda64 SHA512 69b333ba8da97216350102dd054bf97679e36563a9371e9872bcd4d279519cd6179c7d8580b84564ff4dde2b89dc1803c4868ead5a8781efa39a7be27653d1ab
DIST trf.unix.help.html 8258 SHA256 635961550fbef3083e9d318617c3d1ff743636275a8077dd5d58766c2c2a5353 SHA512 fa274dc2eef227fdb1e0ce661d73b397188921a3ea2f7bd3d8d8af787ccd3b8b8534d7c284b24157786a244ead55cdec89315785b01abd7d9f8d94e843e788a7 WHIRLPOOL 6e8ca9b6a09acbcce1f799a844a68b4c8e77e6e849df596b7746a31c4b370bb8bc4168370c0ce0d79bb676191c7c64805e42414705420b30409781fb0e0626c5
-DIST trf.whatnew.html 11946 SHA256 4a30c421d65fdfc122f906e879dc2a7ad0438b60768d7a4c7914031b2d1a8839 SHA512 fa343b0cc96378345e005b66b25f6fac5102417ffec26809190cc445b5397804dd1d0ff9ce0bce9520785c7d054f02a05a95ebb0fd35fd55c51f5992ccd466fb WHIRLPOOL 0ac5cbfff04179693f77e39c40eb42160b15b951110c2345225ac40b5bbe3a525ad01c35d98e5f573c357deef2f3672e6b1e050615a30b67956686f11bf56dd0
-DIST trf404.linux 89853 SHA256 1b9e3917088684afc2287a078810858f7a8e50d90e7bad2d814d40dc24188058 SHA512 c1aa05e394d47ea153df3082258f9a089aa59976963e9ac5d5816ef9dcd95c47e2e46861d1b2aae52b5ea9950a823a2449dd0d8426b04f2b738f5552c319393e WHIRLPOOL 7817c7eeb2c452ece7f71c2b7548fd9cda8c6796d5e77b2de46911f50bb271290b1a9601545efc50b94574c718e0e5e65d4a4e27f5cfd66c3590e9d5b7c5856c
+DIST trf.whatnew.html 11945 BLAKE2B be44f5dd637250220b75fa41a20a74c3c00ae932de1a0d000aade391bb2163021bfd17b591329b5b3565adfee1da52ff7925c964bacffe9c38c3860270de653d SHA512 bacdcae046107de57fb73b0ba62be5e3eb47b4293b94a87b8f5984ad83635ffef6e74f950dbe20540118a26909e01b3621ee71ba8ba5a3b263fba6550aab6531
+DIST trf404.linux 89853 BLAKE2B 36abf95c88a5b8793e875a276f1494af4df48ff3b3f095e07683589d84eaadfb54099c1764dcd437158c356dcd9d55dd274e7e41515ef098ee2a929493cc0d83 SHA512 c1aa05e394d47ea153df3082258f9a089aa59976963e9ac5d5816ef9dcd95c47e2e46861d1b2aae52b5ea9950a823a2449dd0d8426b04f2b738f5552c319393e
diff --git a/sci-biology/trimmomatic/Manifest b/sci-biology/trimmomatic/Manifest
index 42cecc63e..93bd05423 100644
--- a/sci-biology/trimmomatic/Manifest
+++ b/sci-biology/trimmomatic/Manifest
@@ -1,2 +1,2 @@
-DIST Trimmomatic-Src-0.36.zip 106375 SHA256 ccbb1a150799281390f8c50648b15ba583a2c7dbe17f513a96ec6e440412b921 SHA512 9cc962361253f9e248324ba98a277a74672858b1adc31266db203e6a549b2ff73c6172a84a5142a7a0f8806336c69642ac531358ebfc7b2fae6d55a6b54f753a WHIRLPOOL e3bd785bdf0919ec9b7c139ac98c08e411dbba2c1ce374e82bde5b5531a42a58d9e0df76535e944f150f2f30386686d7b70a58c96fb9f8c13d3b923602849f82
-DIST trimmomatic-0.36_manual.pdf 338248 SHA256 bd288ff9bb15e2f27cf310d19fa0d11510fb94bf028fa254b9ab204edd1a5d20 SHA512 a306ce82f5f67c51f3ce62be9758c3c49cb6363932e1d55bb171d102b6f400a1fd3518263bf74c7ba3bac596630c6654ec7de6b055566d182eb6c9ae68e3ed38 WHIRLPOOL 0b57cad78bd46819ec5ca8389f0b7849363b34bd6c28a1563c48536b9b0537b7f7465f5e76d2ef143aafa81f8f5a7cb28626373a2178747cb50ab27583931af2
+DIST Trimmomatic-Src-0.36.zip 106375 BLAKE2B 890f4964c48c681640c2c44e271847bbe6f3f13995054a7ac71d20892742e2935eae0d38d3797be11568d5fef57307ff346366af5227935f2ee90e934023a6d8 SHA512 9cc962361253f9e248324ba98a277a74672858b1adc31266db203e6a549b2ff73c6172a84a5142a7a0f8806336c69642ac531358ebfc7b2fae6d55a6b54f753a
+DIST trimmomatic-0.36_manual.pdf 338248 BLAKE2B 846833b9e263e2bdeca29a4d2474248ff7eb1d65434314bd21dc401b00ca38208a2747474d8ac49be07c45bd48d23e3ecebbd46abe85dd5db2dddd3c935b7670 SHA512 a306ce82f5f67c51f3ce62be9758c3c49cb6363932e1d55bb171d102b6f400a1fd3518263bf74c7ba3bac596630c6654ec7de6b055566d182eb6c9ae68e3ed38
diff --git a/sci-biology/trinityrnaseq/Manifest b/sci-biology/trinityrnaseq/Manifest
index 65fc9cd9f..3dab0eef6 100644
--- a/sci-biology/trinityrnaseq/Manifest
+++ b/sci-biology/trinityrnaseq/Manifest
@@ -1,3 +1,3 @@
-DIST trinityrnaseq-2.0.6.tar.gz 158619106 SHA256 e0c3ec885fdcfe3422ea492372518ddf5d1aed3daa187c69c4254516b0845de1 SHA512 459461db38e42d0b77b9cb84b1ecc4ccb03bbe0fe6e970915d5df58e8c98368a07fab7a157679b0d4247b729b49966b1f3927abee11059e5e3a3406e8e598d45 WHIRLPOOL 040926ab4d1a157c340cf5886bc4cf2846e8756d84c39a1f8673b5ba59dd57b39f075b0fc915deff05dd50655b0e8f0c1b8fe3b6ceb0e0a4b2aec618bef58470
+DIST trinityrnaseq-2.0.6.tar.gz 158619106 BLAKE2B 9be82099f8c563ac6520462feffcdcb1d0cec7fde4b5d3a430abde987bc419f6011642c1a2548de27734493ac8728e9c24d8a67bd8201108a9b1e26020aca2d6 SHA512 459461db38e42d0b77b9cb84b1ecc4ccb03bbe0fe6e970915d5df58e8c98368a07fab7a157679b0d4247b729b49966b1f3927abee11059e5e3a3406e8e598d45
DIST trinityrnaseq-2.1.1.tar.gz 137541420 SHA256 012ccb42e1eab8a5b14c4e78becf3e7e69964d76c17fcca8110db6ffe63d3e0b SHA512 36b67211902871c6dbba31a074c4e92d2e925c57fe54bf59418874282e283693d2d9b4e14333385a7adcef3edbf928bc1001df105b56412841662c45a9a74f3f WHIRLPOOL 73869a3f2dbc72011723429d6ac3acb3fde8c7ccfe4122510afbea9fdfc732a457c8f5d16573190448c4e0d2c5dcc437e2f9cfe96f4239368c95b2da79fd52bd
DIST trinityrnaseq-2.2.0.tar.gz 174159736 SHA256 f34603e56ac76a81447dd230b31248d5890ecffee8ef264104d4f1fa7fe46c9e SHA512 87ba299df990d066ae6aa8a870c3a27647da0d78cf0a48c5084967865d4e278ce383b3f6e54541d4626654f0638f12c739aaed04ed770bc99ed84b94c2e6e5c3 WHIRLPOOL 027ccd958288991c4871cfa6b370d14bc2bf586bc1ffc3247795aaf305368caac373343682f11cde6d72a65422c95718b89fee65ac77c04a21c7c3aaa4c8112d
diff --git a/sci-biology/trowel/Manifest b/sci-biology/trowel/Manifest
index 176d9bb34..0f559502e 100644
--- a/sci-biology/trowel/Manifest
+++ b/sci-biology/trowel/Manifest
@@ -1 +1 @@
-DIST trowel.0.1.4.1.src.tar.gz 298643 SHA256 c56d2ab6dac2092686098a5c14d084c2b02665f790f2448715e668e839105805 SHA512 1b2951cfbda73affeefa514ca43af245bca68347d404ee6081327b5214f0f6649612a8dbd26a137c6f1fef6a5c0194e7e79864e5733f18944fca9086ae3c6a07 WHIRLPOOL a8b1276a145af4a9d69d527f73422b1b738698a5cc9b05de4e6ec2a9cd0630a45863d7c62c40a5e2bed2ffcc1e9dca8de6a89e3e218167d120b1bd1eb091ed34
+DIST trowel.0.1.4.1.src.tar.gz 298643 BLAKE2B 10ef63713ed7fd9cec772d0786b8262a9ebffb363a3f310a5dfabe1229428eee6158398f4f5d4426795bab9093d308d9bfa03e09f13a8fdc2755998fea8fcb26 SHA512 1b2951cfbda73affeefa514ca43af245bca68347d404ee6081327b5214f0f6649612a8dbd26a137c6f1fef6a5c0194e7e79864e5733f18944fca9086ae3c6a07
diff --git a/sci-biology/twinscan/Manifest b/sci-biology/twinscan/Manifest
index 7e7f3adc1..ecf54c4a0 100644
--- a/sci-biology/twinscan/Manifest
+++ b/sci-biology/twinscan/Manifest
@@ -1 +1 @@
-DIST twinscan-4.1.2.tar.gz 5894833 SHA256 30c7e980b2ccbba22a5e2d7ff0d7c1aaeb610cc1cec81432bb30e87f03f7e56a SHA512 d216f790f6d0f35a070575d1aa4b5e1866c00132168b381b9177b076b1b2a16f2ecd7a88aa443d7ba6b8f62c3ec2595ba33c4608a674e09d94e9f7dc6a181327 WHIRLPOOL e95df100f970c6cabf9b21a9a6651dcd249fccbfafc908a8766bf26ad5108c08b5de105c5142492bb7b0c13f39bd65836a92be9161cfbbb303147f925e775d99
+DIST twinscan-4.1.2.tar.gz 5894833 BLAKE2B 5d8b14694961eca181d8b7aeb0387f31b6f9eac77674a919df2d3c2aec1d65f845f4dd4ed937deb6c3d338389e545d9692d6f6b57db6cc7bac5ccadfb74c8714 SHA512 d216f790f6d0f35a070575d1aa4b5e1866c00132168b381b9177b076b1b2a16f2ecd7a88aa443d7ba6b8f62c3ec2595ba33c4608a674e09d94e9f7dc6a181327
diff --git a/sci-biology/vague-bin/Manifest b/sci-biology/vague-bin/Manifest
index 8f80714d7..3b9b9cc80 100644
--- a/sci-biology/vague-bin/Manifest
+++ b/sci-biology/vague-bin/Manifest
@@ -1 +1 @@
-DIST vague-1.0.5.tar.gz 19109369 SHA256 7144bef4a5c8ccb3d0e6b27201a506e1cfa25812fb9bbe54842dc910100c5907 SHA512 4b676099dd51f45b80c9afbdf17d3eef07f847576437aa592a35ff5e81f54b6c6004c9bd3af15aa944339fa5f78745630d9ea45ea4de984c51d2c7d58667f6b7 WHIRLPOOL fbe8f4174949921f899fbfe1c8acfc8442425eba34b7b2d56b297e622e748085df2c6e34503a976489d36467750c90b9c0c4aa7b52fd9d02731ba3b1679d93f9
+DIST vague-1.0.5.tar.gz 19109369 BLAKE2B e125cc642914318460d01fb4c94221f59f3231681a68770996ba928d1719b2b2597733d544147a1dfce6036d615e91d020199496b5c6d9cce43a360b9ef165b4 SHA512 4b676099dd51f45b80c9afbdf17d3eef07f847576437aa592a35ff5e81f54b6c6004c9bd3af15aa944339fa5f78745630d9ea45ea4de984c51d2c7d58667f6b7
diff --git a/sci-biology/vcftools/Manifest b/sci-biology/vcftools/Manifest
index 0f255bb48..90b2bb4ad 100644
--- a/sci-biology/vcftools/Manifest
+++ b/sci-biology/vcftools/Manifest
@@ -1 +1 @@
-DIST vcftools-0.1.15.tar.gz 481398 SHA256 31e47afd5be679d89ece811a227525925b6907cce4af2c86f10f465e080383e3 SHA512 9ef5688202b263139c7e6f3ff0d6f2565f08bc7b5a67dba7b5f6845791b34ae23515e65b2b294502fe8a8343d061612fa9c5f11742323cd70c2f8409609e0366 WHIRLPOOL b98581f54650979989a9e29745e1db35206e14b70e2221a2aacc1ebb76b13ce7b93320cd56f45deb2a43a1bbddf40dc8edc075340ef0fe7f237eec42bb2b9fb9
+DIST vcftools-0.1.15.tar.gz 481398 BLAKE2B c6a2578d35f02b4bd33a4dfc6c356228e0c59617440f03ec48a13ac4eb13135ea1dbd3119937a65734cad3d3144c901a05f6de97de505fd4f39b24046c67e17a SHA512 9ef5688202b263139c7e6f3ff0d6f2565f08bc7b5a67dba7b5f6845791b34ae23515e65b2b294502fe8a8343d061612fa9c5f11742323cd70c2f8409609e0366
diff --git a/sci-biology/velvetk/Manifest b/sci-biology/velvetk/Manifest
index 4a7a8c140..56070ef2f 100644
--- a/sci-biology/velvetk/Manifest
+++ b/sci-biology/velvetk/Manifest
@@ -1 +1 @@
-DIST velvetk.pl 5862 SHA256 914fa4a601ab819d0c2239c2bc17e2f65c199dd4deea22bdd649f81e1961f02b SHA512 2f89964888730ffa0fc1fee043af0f050ff856e059ca541f664637d27c88c0fc306bec5d078683641863c0e17c09c76dfaf5e7ebe2eed42714cca3725239af51 WHIRLPOOL 846c9bd1d62a2d432cca0f05a18c5bdf4f17e98f284dafb48bba7b0672f0e0426bf76537412d45c445fff8eca44f1eabb000a2efff357f90ff41d3c027c4139b
+DIST velvetk.pl 5862 BLAKE2B adae9add735093b4b4424c26fad82d205cbfe4eb50efc7297fb6bec1b8b67d39adbf80c03e9488be9ab7c5fa84d4d4a1c5a4e3a84eedfb8a75fe42d991511629 SHA512 2f89964888730ffa0fc1fee043af0f050ff856e059ca541f664637d27c88c0fc306bec5d078683641863c0e17c09c76dfaf5e7ebe2eed42714cca3725239af51
diff --git a/sci-biology/verifyBamID/Manifest b/sci-biology/verifyBamID/Manifest
index a6034694d..0dc22078a 100644
--- a/sci-biology/verifyBamID/Manifest
+++ b/sci-biology/verifyBamID/Manifest
@@ -1,2 +1,2 @@
-DIST libStatGen-1.0.13.tar.gz 558682 SHA256 a67a3126fbf227a5c3a4de044447bf01eb8e091c737f7696449f764e42926339 SHA512 bcce3dd2f343e5941857d5bca0f2960d69b3e1083da6312e018a96bb92fb8dbc91ac511e062b024720c45508aa805d3f4f6511f60201438176a898ab789e746f WHIRLPOOL 533f255adc73d5aff0c45191d97a138723ff4a84e70f72bc0f66430b62071afe7ff6efa09d519ebce9954263b5c5a1a8ce066d648305aa2602a0d831abbdb6f6
-DIST verifyBamID-1.1.3.tar.gz 68447 SHA256 985584895e31b40422745d60542e5a30a3038ca735c65a8ba7802da58d721e22 SHA512 1b39b1f7b8a40f3c6c08af5a4ad24b8aebe5dc0dc3b1bf4401632fa6cac56dc8d5e17c18f142caa5cc00c7c654f43737b2550149f4c4416166f439688634235e WHIRLPOOL 97a3d0f3fcb0388d016b5406921eb63f3cd6585b827c0c7dbc0226325c77a113b7eb142fc0d2c1f6fe6535419c56e51946ffe9ff0c3b2f35e1e0ab7f70568f69
+DIST libStatGen-1.0.13.tar.gz 558682 BLAKE2B 8e9308c698110e2e3a735e14171954c2bf1e7ac7f05d6c86072389aa697246d69033a0844f4bfccce1dc74623e847c551e388e19b00469274d5ef945e080811c SHA512 bcce3dd2f343e5941857d5bca0f2960d69b3e1083da6312e018a96bb92fb8dbc91ac511e062b024720c45508aa805d3f4f6511f60201438176a898ab789e746f
+DIST verifyBamID-1.1.3.tar.gz 68447 BLAKE2B 411511edf45dd6ddd9f882f894a133fb7734c5bbab0a6b34e3b20849c25719b2566de93a4e9bc2dc119782bfe0089a772baeb53b52fad237d7c89ad98991b897 SHA512 1b39b1f7b8a40f3c6c08af5a4ad24b8aebe5dc0dc3b1bf4401632fa6cac56dc8d5e17c18f142caa5cc00c7c654f43737b2550149f4c4416166f439688634235e
diff --git a/sci-biology/wcd/Manifest b/sci-biology/wcd/Manifest
index 4ea47c978..82794c9c1 100644
--- a/sci-biology/wcd/Manifest
+++ b/sci-biology/wcd/Manifest
@@ -1,3 +1,3 @@
-DIST wcd-0.6.3.tar.gz 825166 SHA256 e85f9b75f1fe487f9ee59ec19fde5c082d9e30a204b2af0ccaea7b52ff3bd684 SHA512 6c9a93636c201bad33b38d405ac56e8c12dbc59b0b0752bc1bf40420db2a188c76741d51d60cb13de52a0393a0d120c86862bf5d8794ef2a3892773c3d0505d8 WHIRLPOOL 5a867ebeb62874a7d05c159d0bab01e817eae2bcb9e441368f3312db5d0afddbb1e222d3fc77aa20593256edccc85c41e7de2c9656a1078f7ed76f67a5549bb2
-DIST wcd.html 8448 SHA256 da67acc5b61de2cb0997361e1d285fb33ddd5576b8355404ce82d92a5976a80f SHA512 11156d4811b7716632fbd7b0330d918ae30b6dcc9ebbd59c95d445ba465504aa68d0fa9863b3ad4b5743c929f4558d1698af03c124fd02299ef13479a80555c2 WHIRLPOOL bba82c51d454853ca77f543b72c3f9516511d1e16b42a90b4641e308ad330f8c1ffd39a47e324e2fe2c7158b1f6a71ae49f8979a05c5f3551d2cba3916ea221d
-DIST wcd.pdf 275513 SHA256 c319d341f450dd2a7cb700b43365ada45a2f0cdc0fdd16d7071c4bd98d706557 SHA512 ef2e0e8bbe49a5c5b304a305d8948b253ba2bf789790941600c5d5ba74351fe41e54a66dd189a33846304a8f2a8fa4c70025e516f3b73643da71030cbded63a2 WHIRLPOOL 43ad1bfcaf01af27a50c83d02f5962efc4a51df93ab5b5e1eb785a94c2d424a5c7e34b1cd424e5f8a6d5f8d1f1983ad2b5df1c4337ea2d92d9dad7a8f4cfde20
+DIST wcd-0.6.3.tar.gz 825166 BLAKE2B 163ae4c0dbae68630dc2424b2b5abcc8ebcb5929c41c76eb7c09fb29fb9161de064a7c064ed931771b7991b270c8c8f3bc085802a178b0dc558b63d15836ae93 SHA512 6c9a93636c201bad33b38d405ac56e8c12dbc59b0b0752bc1bf40420db2a188c76741d51d60cb13de52a0393a0d120c86862bf5d8794ef2a3892773c3d0505d8
+DIST wcd.html 8448 BLAKE2B d1561925a0f299d12c177f499a95fbc314d558c18106642c49852bd96a104bdef5271b5ea1b4312e70936db6726ea3ea54e3a942d9c9c52e806b48137321cf05 SHA512 11156d4811b7716632fbd7b0330d918ae30b6dcc9ebbd59c95d445ba465504aa68d0fa9863b3ad4b5743c929f4558d1698af03c124fd02299ef13479a80555c2
+DIST wcd.pdf 275513 BLAKE2B 049d0d8b9d6db0e2754322f69903c5680a62c007a9abf5466b21a96f778a9f537a8ec91344d729961317ff6a8b484ca870f5ee0a78fa7cec8ae4ba2d7c5f1939 SHA512 ef2e0e8bbe49a5c5b304a305d8948b253ba2bf789790941600c5d5ba74351fe41e54a66dd189a33846304a8f2a8fa4c70025e516f3b73643da71030cbded63a2
diff --git a/sci-biology/weblogo/Manifest b/sci-biology/weblogo/Manifest
index 265857413..eb9181eff 100644
--- a/sci-biology/weblogo/Manifest
+++ b/sci-biology/weblogo/Manifest
@@ -1 +1 @@
-DIST weblogo.2.8.2.tar.gz 303971 SHA256 2d3e0040c0c1e363c1dfd57f8b585387eb682ed08b2cc2fe2e4cc2a33ac52266 SHA512 05fe94db1c82d78913141dde650d2f6c7e851e88c5b4a7707253103e562d44f9cac318a8037f14dbe605c0f5ec3a89bb806a0c199d4c43eb018ed66a980e535d WHIRLPOOL 156de14427014b25f21faf204503b09d8d46bb6cce602aba9fc50ef47cf73d03f67c97800494e7bae44756738ca1781e69d12e9b5b6bf0e40798f519ff758586
+DIST weblogo.2.8.2.tar.gz 303971 BLAKE2B fd3dd23e94a534d8a0e62331053913ca9558270a3d55484c9e9ff49bc88f3f9cd6b44a6c4dfdfdd6163327be7579b43c02722830892576ef309542fb42cd59fc SHA512 05fe94db1c82d78913141dde650d2f6c7e851e88c5b4a7707253103e562d44f9cac318a8037f14dbe605c0f5ec3a89bb806a0c199d4c43eb018ed66a980e535d
diff --git a/sci-biology/wgs-assembler/Manifest b/sci-biology/wgs-assembler/Manifest
index a50a8cf3c..eb30e2759 100644
--- a/sci-biology/wgs-assembler/Manifest
+++ b/sci-biology/wgs-assembler/Manifest
@@ -1 +1 @@
-DIST wgs-8.3rc2.tar.bz2 24603412 SHA256 6ba1711ebe56629b670be87ae040ac948057474b3959666a88f0862c6a40f27b SHA512 10646ce59c3d557b744287b63f8f0ff494fd6919c61974389b9a3870a03b19067d58ba3f545afbc1e1dfda85cac76ea0e84474911442ae2097660cc6ea73fc44 WHIRLPOOL d3a5356839c6242b3deb2184963d7afd072c67d92590de8902cfeefd2fe564db3a0510677c9a9203a39be4bc4bf7861fbaf3ff9990e640b9965514b64b335ce1
+DIST wgs-8.3rc2.tar.bz2 24603412 BLAKE2B ac6ae82289df6f9c79ed1438459135b6ecd0b75ddd9b319d3305c06f661f1478b58b5ae9ed4587cd21c9b33497048936205a533d6a2d06a83c3b8bfc3eb15736 SHA512 10646ce59c3d557b744287b63f8f0ff494fd6919c61974389b9a3870a03b19067d58ba3f545afbc1e1dfda85cac76ea0e84474911442ae2097660cc6ea73fc44
diff --git a/sci-biology/wise/Manifest b/sci-biology/wise/Manifest
index 3480f82a0..e0adc951a 100644
--- a/sci-biology/wise/Manifest
+++ b/sci-biology/wise/Manifest
@@ -1 +1 @@
-DIST wise2.4.1.tar.gz 3193910 SHA256 240e2b12d6cd899040e2efbcb85b0d3c10245c255f3d07c1db45d0af5a4d5fa1 SHA512 aca14bf4fb1ab6070847cfd857d5b3c518695a020fc85b67e1f34b69b5cdb7b28b68c5779eca9af84679d56ca98f7caf1f8c2596ff02b5dd304cd9235aeb2f61 WHIRLPOOL e410abb35b126319b406c06c305076ca15fa677b1a67df617116e809297d06011a2353c869d2a9dbbedd3bec3b8fcc0bbbc8bd0c7ad0fcd9704f6b2f5f77d1ee
+DIST wise2.4.1.tar.gz 3193910 BLAKE2B 45e33b1a4c8ffcb73ad1d2c50be4baeb3a0958a94c2c057db163b33ae33edd5e7159d7fd818725fd13c9ccb2440f61a747e2535b68e0eb25bc09c907d0b4da4d SHA512 aca14bf4fb1ab6070847cfd857d5b3c518695a020fc85b67e1f34b69b5cdb7b28b68c5779eca9af84679d56ca98f7caf1f8c2596ff02b5dd304cd9235aeb2f61
diff --git a/sci-biology/zmsort/Manifest b/sci-biology/zmsort/Manifest
index 6672c8a45..5827bcd78 100644
--- a/sci-biology/zmsort/Manifest
+++ b/sci-biology/zmsort/Manifest
@@ -1,2 +1,2 @@
-DIST gclib-110625.tar.gz 82727 SHA256 0c7f21fc92b033cd442b672e9014e3ffb9f2de97769ca525715692ed9359439b SHA512 a6819e6dcb092c13b4f5da7eca6c82a9a46b512aeff2596cb4b921aeb8088c40bf2283be66862ab4d2195062b8126169e02945bcf4c8d4f118fa1e34bccba197 WHIRLPOOL 575ef5382cb46d4865523549d36dcb0785f0a99723b1286f9f8d247939957fc2d43951684f5a94bbf134befb8283fb7d0642f308b152cbd5d9453ef2dcfef09a
-DIST zmsort-110625.tar.gz 6192 SHA256 8267592ec5ddb070a5feb07fcf475ce13ec28cdda33d685a218098bd6bc2962f SHA512 c24eafebe057ea539c382c887926cb53a1a7757226d7aa7e48f381d8846d8d3cca86ff664b5eef61c490e62683c64886b33ba9431201aec400cc7e0988ae8844 WHIRLPOOL 0bfeb479f1a339fb744e54063e26e1bb0399b8c2822157b351178eece3fc9ef16db6f9b8346156025023536d63af6791ed1d16a74970eceb387c96de614cabb9
+DIST gclib-110625.tar.gz 82727 BLAKE2B b99a89d39ed76c643a9e379cb7294c63ec0d186a106c331f6ff4df6a40fcc5585f81e4c9d6015af434e2a75ea46e0e3783dda627abae32276ce9204c719bef2f SHA512 a6819e6dcb092c13b4f5da7eca6c82a9a46b512aeff2596cb4b921aeb8088c40bf2283be66862ab4d2195062b8126169e02945bcf4c8d4f118fa1e34bccba197
+DIST zmsort-110625.tar.gz 6192 BLAKE2B f60805b8062a3e83d7a9c2f0c1238d22147df530f13519d0397c6832cb935bf86b6f4191109dbcf2621ad87f4b247470c4b52a982ff5a76e8301e31dc2ad45e0 SHA512 c24eafebe057ea539c382c887926cb53a1a7757226d7aa7e48f381d8846d8d3cca86ff664b5eef61c490e62683c64886b33ba9431201aec400cc7e0988ae8844