1 files changed, 0 insertions, 171 deletions
diff --git a/sci-chemistry/rosetta/rosetta-3.4.ebuild b/sci-chemistry/rosetta/rosetta-3.4.ebuild
deleted file mode 100644
index bf40276a7..000000000
--- a/sci-chemistry/rosetta/rosetta-3.4.ebuild
+++ /dev/null
@@ -1,171 +0,0 @@
-# Copyright 1999-2015 Gentoo Foundation
-# Distributed under the terms of the GNU General Public License v2
-
-# boinc support is BROKEN !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!
-
-EAPI=5
-
-inherit eutils multilib prefix scons-utils toolchain-funcs versionator
-
-#MY_P="${PN}$(get_major_version)_source"
-MY_P="${PN}${PV}_source"
-
-DESCRIPTION="Prediction of protein structures and protein-protein interactions"
-HOMEPAGE="http://www.rosettacommons.org/"
-SRC_URI="${MY_P}.tgz patch_rosetta3.4_to_CSROSETTA3_ver1.3.txt"
-
-LICENSE="|| ( rosetta-academic rosetta-commercial )"
-SLOT="0"
-KEYWORDS="~amd64 ~x86 ~amd64-linux ~x86-linux"
-IUSE="boinc +boost custom-cflags debug doc float +lange mpi +openmp X"
-
-REQUIRED_USE="?? ( mpi boinc )"
-
-RESTRICT="fetch"
-
-RDEPEND="
-	dev-db/cppdb
-	mpi? ( virtual/mpi )
-	boinc? ( sci-misc/boinc[X?] )
-	boost? ( dev-libs/boost )
-	sci-libs/rosetta-db"
-DEPEND="${RDEPEND}
-	dev-util/scons
-	doc? ( app-doc/doxygen )
-	X? ( media-libs/freeglut )"
-
-MYCONF=""
-
-S="${WORKDIR}/${PN}_source"
-
-pkg_nofetch() {
-	einfo "Go to ${HOMEPAGE} and get ${A}"
-	einfo "which must be placed in ${DISTDIR}"
-}
-
-src_prepare() {
-	local myCXXFLAGS
-	local myLDFLAGS
-
-	use custom-cflags || \
-		export CXXFLAGS="-O3 -ffast-math -funroll-loops -finline-functions -finline-limit=20000 -pipe"
-
-	export LD_LIBRARY_PATH=""
-	use lange && \
-		epatch \
-			"${DISTDIR}"/patch_${PN}${PV}_to_CSROSETTA3_ver1.3.txt \
-			"${FILESDIR}"/${P}-lange-fix.patch
-
-	epatch \
-		"${FILESDIR}"/${P}-platform.patch \
-		"${FILESDIR}"/${P}-user-settings.patch \
-		"${FILESDIR}"/${P}-fix-valgrind.patch \
-		"${FILESDIR}"/${P}-boinc.patch \
-		"${FILESDIR}"/${P}-boost.patch \
-		"${FILESDIR}"/${P}-boost157.patch \
-		"${FILESDIR}"/${P}-gcc4.789.patch
-
-	eprefixify tools/build/*
-
-	rm bin/* external/{dbio,scons-local,lib} -rfv || die
-
-	find external/boost_1_46_1 -name "*.hpp" -delete || die
-
-	for i in ${CXXFLAGS}; do
-		myCXXFLAGS="${myCXXFLAGS} \"${i/-/}\","
-	done
-
-	for i in ${LDFLAGS}; do
-		myLDFLAGS="${myLDFLAGS} \"${i/-/}\","
-	done
-
-	sed \
-		-e "s:GENTOO_CXXFLAGS:${myCXXFLAGS}:g" \
-		-e "s:GENTOO_LDFLAGS:${myCXXFLAGS} ${myLDFLAGS}:g" \
-		-e "s:GENTOO_LIBDIR:$(get_libdir):g" \
-		-e "/program_path/s:#::g" \
-		-i tools/build/user.settings || die
-
-	tc-export CC CXX
-
-	if use mpi; then
-		sed \
-			-e 's:mpiCC:mpicxx:g' \
-			-i tools/build/basic.settings || die
-		sed \
-			-e "/cxx/d" \
-			-i tools/build/user.settings || die
-	fi
-}
-
-src_configure() {
-	local myextras=""
-	local mymode=""
-	local mycxx=""
-
-	use boinc && EXTRAS="boinc"
-	use boost && EXTRAS=$(my_list_append "${EXTRAS}" "boost")
-	use boost && EXTRAS=$(my_list_append "${EXTRAS}" "boost_thread")
-	use float && EXTRAS=$(my_list_append "${EXTRAS}" "rosetta_float")
-	use openmp && EXTRAS=$(my_list_append "${EXTRAS}" "omp")
-	use X && EXTRAS=$(my_list_append "${EXTRAS}" "graphics")
-	use mpi && EXTRAS=$(my_list_append "${EXTRAS}" "mpi")
-
-	COMPILER=$(expr match "$(tc-getCC)" '.*\([a-z]cc\)')
-	mycxx="cxx=${COMPILER}"
-
-	test -n "${EXTRAS}" && myextras="extras=${EXTRAS}"
-
-	if use debug; then
-		mymode="debug"
-	else
-		mymode="release"
-	fi
-
-	MYCONF="mode=${mymode} ${myextras} ${mycxx}"
-}
-
-src_compile() {
-	einfo "running 'scons bin cat=src ${MYCONF}' ..."
-	escons bin cat=src ${MYCONF}
-
-	if use doc; then
-		einfo "running 'scons ${MYCONF} cat=doc' ..."
-		scons ${MYCONF} cat=doc || die "scons failed to build documentation"
-	fi
-}
-
-src_install() {
-	dolib.so build/src/release/linux/*/*/*/*/*/${EXTRAS//,/-}/*.so*
-
-	use doc && dohtml build/doc/rosetta++/docs/*
-
-	cd bin || die
-	for BIN in *; do
-		newbin ${BIN} ${BIN%%.*} || die "could not install rosetta program files"
-	done
-
-	if [[ -e "${ED}"/usr/bin/cluster ]]; then
-		mv "${ED}"/usr/bin/cluster{,-${PN}} || die
-	fi
-
-	if [[ -e "${ED}"/usr/bin/benchmark ]]; then
-		mv "${ED}"/usr/bin/benchmark{,-${PN}} || die
-	fi
-}
-
-my_filter_option() {
-	local value="$1"
-	local exp="$2"
-	local result=`echo ${value} | sed -e s/${exp}//g`
-	echo "${result}"
-	return 0;
-}
-
-my_list_append() {
-	local old_value="$1"
-	local new_value="$2"
-	test -n "${old_value}" && old_value="${old_value},"
-	echo "${old_value}${new_value}"
-	return 0;
-}