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Diffstat (limited to 'sci-chemistry/xia2/xia2-0.3.0.0-r1.ebuild')
-rw-r--r-- | sci-chemistry/xia2/xia2-0.3.0.0-r1.ebuild | 70 |
1 files changed, 70 insertions, 0 deletions
diff --git a/sci-chemistry/xia2/xia2-0.3.0.0-r1.ebuild b/sci-chemistry/xia2/xia2-0.3.0.0-r1.ebuild new file mode 100644 index 000000000..f14e694b8 --- /dev/null +++ b/sci-chemistry/xia2/xia2-0.3.0.0-r1.ebuild @@ -0,0 +1,70 @@ +# Copyright 1999-2009 Gentoo Foundation +# Distributed under the terms of the GNU General Public License v2 +# $Header: $ + +FORTRANC="g77 gfortran ifc" + +inherit eutils python fortran + +DESCRIPTION="An automated data reduction system for crystallography" +HOMEPAGE="http://www.ccp4.ac.uk/xia/" +SRC_URI="${HOMEPAGE}/${P}.tar.bz2" + +LICENSE="BSD" +SLOT="0" +KEYWORDS="~amd64 ~x86" +IUSE="" + +RDEPEND=">=sci-chemistry/ccp4-6.1.1-r5 + sci-chemistry/pointless + sci-chemistry/mosflm + >=sci-libs/ccp4-libs-6.1.1-r7" +DEPEND="${RDEPEND}" + +src_unpack() { + unpack ${A} + cd "${S}" + find . -name '*.bat' | xargs rm || die + + epatch "${FILESDIR}"/${PV}-fix-syntax.patch +} + +src_compile() { + cd "${S}"/${P}/binaries/src + cp "${FILESDIR}"/Makefile.chef Makefile + emake \ + FC="${FORTRANC}" || die +} + +src_install() { + dobin ${P}/binaries/src/{doser,chef,mat2symop,symop2mat} || die + + rm -rf ${P}/binaries ${PN}core-${PV}/Test || die + + insinto /usr/share/ccp4/XIAROOT/ + doins -r * || die + + # Set programs executable +# fperms cannot handle wildcards + chmod 755 "${D}"/usr/share/ccp4/XIAROOT/${P}/Applications/* || die + chmod 644 "${D}"/usr/share/ccp4/XIAROOT/${P}/Applications/*.py || die + + cat >> "${T}"/23XIA <<- EOF + XIA2_HOME=/usr/share/ccp4/XIAROOT + + XIA2CORE_ROOT=/usr/share/ccp4/XIAROOT/xia2core-${PV} + XIA2_ROOT=/usr/share/ccp4/XIAROOT/xia2-${PV} + + PATH=/usr/share/ccp4/XIAROOT/xia2-${PV}/Applications + EOF + + doenvd "${T}"/23XIA +} + +pkg_postinst() { + python_mod_optimize /usr/share/ccp4/XIAROOT +} + +pkg_postrm() { + python_mod_cleanup /usr/share/ccp4/XIAROOT +} |