xdsi kpdf -> xpdf fix

1 files changed, 70 insertions, 0 deletions

diff --git a/sci-chemistry/xia2/xia2-0.3.0.0-r1.ebuild b/sci-chemistry/xia2/xia2-0.3.0.0-r1.ebuild
new file mode 100644
index 000000000..f14e694b8
--- /dev/null
+++ b/sci-chemistry/xia2/xia2-0.3.0.0-r1.ebuild
@@ -0,0 +1,70 @@
+# Copyright 1999-2009 Gentoo Foundation
+# Distributed under the terms of the GNU General Public License v2
+# $Header: $
+
+FORTRANC="g77 gfortran ifc"
+
+inherit eutils python fortran
+
+DESCRIPTION="An automated data reduction system for crystallography"
+HOMEPAGE="http://www.ccp4.ac.uk/xia/"
+SRC_URI="${HOMEPAGE}/${P}.tar.bz2"
+
+LICENSE="BSD"
+SLOT="0"
+KEYWORDS="~amd64 ~x86"
+IUSE=""
+
+RDEPEND=">=sci-chemistry/ccp4-6.1.1-r5
+	sci-chemistry/pointless
+	sci-chemistry/mosflm
+	>=sci-libs/ccp4-libs-6.1.1-r7"
+DEPEND="${RDEPEND}"
+
+src_unpack() {
+	unpack ${A}
+	cd "${S}"
+	find . -name '*.bat' | xargs rm || die
+
+	epatch "${FILESDIR}"/${PV}-fix-syntax.patch
+}
+
+src_compile() {
+	cd "${S}"/${P}/binaries/src
+	cp "${FILESDIR}"/Makefile.chef Makefile
+	emake  \
+		FC="${FORTRANC}" || die
+}
+
+src_install() {
+	dobin ${P}/binaries/src/{doser,chef,mat2symop,symop2mat} || die
+
+	rm -rf ${P}/binaries ${PN}core-${PV}/Test || die
+
+	insinto /usr/share/ccp4/XIAROOT/
+	doins -r * || die
+
+	# Set programs executable
+# fperms cannot handle wildcards
+	chmod 755 "${D}"/usr/share/ccp4/XIAROOT/${P}/Applications/* || die
+	chmod 644 "${D}"/usr/share/ccp4/XIAROOT/${P}/Applications/*.py || die
+
+	cat >> "${T}"/23XIA <<- EOF
+	XIA2_HOME=/usr/share/ccp4/XIAROOT
+
+	XIA2CORE_ROOT=/usr/share/ccp4/XIAROOT/xia2core-${PV}
+	XIA2_ROOT=/usr/share/ccp4/XIAROOT/xia2-${PV}
+
+	PATH=/usr/share/ccp4/XIAROOT/xia2-${PV}/Applications
+	EOF
+
+	doenvd "${T}"/23XIA
+}
+
+pkg_postinst() {
+	python_mod_optimize /usr/share/ccp4/XIAROOT
+}
+
+pkg_postrm() {
+	python_mod_cleanup /usr/share/ccp4/XIAROOT
+}