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* app-admin/eselect: Drop oldJustin Lecher2015-04-0210-1672/+7
| | | | Package-Manager: portage-2.2.18
* Merge remote-tracking branch 'github/master'Justin Lecher2015-04-024-230/+233
|\ | | | | | | | | | | * github/master: sci-libs/openblas: Cleanup symlinks and files sci-libs/openblas: Fix Bug 528974
| * sci-libs/openblas: Cleanup symlinks and filesMarius Brehler2015-04-022-228/+228
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| * sci-libs/openblas: Fix Bug 528974Marius Brehler2015-04-022-2/+5
| | | | | | | | Package-Manager: portage-2.2.14
* | Moved to treeJustin Lecher2015-04-014-126/+0
| | | | | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* | sci-biology/jellyfish: fix /usr/lib64/pkgconfig/jellyfish-2.0.pcMartin Mokrejš2015-04-012-3/+8
| | | | | | | | Package-Manager: portage-2.2.18
* | sci-biology/bambus: fix installation process and use current perl-module ↵Martin Mokrejš2015-03-313-26/+41
| | | | | | | | | | | | files from amos package instead Package-Manager: portage-2.2.18
* | sci-biology/amos: fix installation process and dependenciesMartin Mokrejš2015-03-316-4/+139
| | | | | | | | Package-Manager: portage-2.2.18
* | sci-biology/jellyfish: fix installation of header *.hpp files into ↵Martin Mokrejš2015-03-312-1/+13
| | | | | | | | | | | | /usr/include/jellyfish-2.1.3/jellyfish/ broken somewhere in upstream's code Package-Manager: portage-2.2.18
* | sci-biology/abacas: clarify descriptionMartin Mokrejš2015-03-312-1/+4
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* | sci-biology/abacas: new packageMartin Mokrejš2015-03-314-0/+52
| | | | | | | | Package-Manager: portage-2.2.18
* | sci-biology/augustus: version bump, new license (temporarily), new ↵Martin Mokrejš2015-03-314-0/+143
| | | | | | | | | | | | dependencies since 3.0 series Package-Manager: portage-2.2.18
* | renamed to makerMartin Mokrejš2015-03-303-42/+0
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* | sci-biology/allpathslg: noted another home-like web pageMartin Mokrejš2015-03-302-1/+6
| | | | | | | | Package-Manager: portage-2.2.18
* | sci-biology/allpathslg: version bump; added dependency on >=gcc-4.7Martin Mokrejš2015-03-304-0/+121
| | | | | | | | Package-Manager: portage-2.2.18
* | sci-biology/exonerate-gff3: an improved version of exonerate-2.2.0 with GFF3 ↵Martin Mokrejš2015-03-304-0/+89
| | | | | | | | format output support
* | sci-biology/snap: new packageMartin Mokrejš2015-03-304-0/+54
| | | | | | | | Package-Manager: portage-2.2.18
* | sci-biology/maker: improving the ebuild, needs some perl packages to be ↵Martin Mokrejš2015-03-304-0/+76
| | | | | | | | | | | | first introduced into portage tree; needs proper install and to avoid bundled 3rd-party binaries, not sure if the perl modules are a copy of bioperl or not Package-Manager: portage-2.2.18
* | sci-biology/kmergenie: version bumpMartin Mokrejš2015-03-303-1/+7
|/ | | | Package-Manager: portage-2.2.18
* sci-chemistry/modelfree: Fix for new gcc slottingJustin Lecher2015-03-302-4/+6
| | | | Package-Manager: portage-2.2.18
* sci-chemistry/cpmgfit: Fix for new gcc slottingJustin Lecher2015-03-302-4/+6
| | | | Package-Manager: portage-2.2.18
* sci-chemistry/curvefit: Fix for new gcc slottingJustin Lecher2015-03-302-4/+6
| | | | Package-Manager: portage-2.2.18
* Merge remote-tracking branch 'github/master'Justin Lecher2015-03-2911-113/+81
|\ | | | | | | | | | | * github/master: sci-libs/dealii: Ebuild maintenance, remove wrong avx2 use flag sci-mathematics/acl2: Version bump, drop old; USE flags change.
| * Merge pull request #382 from ustcscgy/acl2Justin2015-03-296-99/+64
| |\ | | | | | | sci-mathematics/acl2: Version bump; USE flags change.
| | * sci-mathematics/acl2: Version bump, drop old; USE flags change.zcj2015-03-256-99/+64
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| * | sci-libs/dealii: Ebuild maintenance, remove wrong avx2 use flagMatthias Maier2015-03-285-14/+17
| | | | | | | | | | | | Package-Manager: portage-2.2.15
* | | sci-mathematics/z3: Correct license to MIT, thanks Daniel GOUJOTJustin Lecher2015-03-293-8/+10
|/ / | | | | | | Package-Manager: portage-2.2.18
* | Moved to treeJustin Lecher2015-03-281-133/+0
| | | | | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* | Moved to tree, thanks Ted Tanberry for all the helpJustin Lecher2015-03-2892-5035/+0
| | | | | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* | Merge pull request #393 from SoapZaNet/embossJustin2015-03-2818-15/+38
|\ \ | | | | | | Updated emboss-r1.eclass and all embassy/emboss packages to confirm to QA
| * | Removed reference to EXTRA_ECONF in emboss-r1.eclassTed Tanberry2015-03-281-2/+1
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| * | Updated emboss-r1.eclass and all embassy/emboss packages to confirm to QA ↵Ted Tanberry2015-03-2818-15/+39
|/ / | | | | | | standards.
* | sci-biology/tablet-bin: Update HOMEPAGETed Tanberry2015-03-281-1/+1
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* | Merge pull request #392 from hmmr/masterJustin2015-03-282-0/+33
|\ \ | | | | | | install binaries in /usr/bin not /bin
| * | install binaries in /usr/bin not /binAndrei Zavada2015-03-282-0/+33
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* | | sci-libs/openblas: version bumpDenis Dupeyron2015-03-273-1/+234
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* | | Merge remote-tracking branch 'github/master'Justin Lecher2015-03-2531-95/+589
|\ \ \ | | |/ | |/| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * github/master: (55 commits) sci-libs/arrayfire: Drop patch, fixed upstream sci-libs/arrayfire: Enable OpenCL backend sci-libs/armadillo: Version bump sci-libs/arrayfire: Add ~amd64 keyword to 3.0_beta sci-libs/clblas: Fix homepage dev-util/amdapp: Add 3.0_beta sci-libs/clblas: Fix client installation sci-libs/clblas: New package sci-libs/arrayfire: Add 3.0_beta sci-libs/arrayfire: Drop patches, fix ebuild sci-biology/est2uni: Drop keywords (php:5.3 is hardmasked) installing into octave M subdirectory installing ALL the things typo fixed doins path removed slots, added new version added quotation marks, removed ori file added metadata inlined URI_BASE Minor improvements + added metadata.xml ...
| * | Merge pull request #107 from TheChymera/spm-octaveChristoph Junghans2015-03-245-0/+110
| |\ \ | | | | | | | | Package for SPM8 (implemented for octave)
| | * | installing into octave M subdirectoryHorea Christian2015-03-112-1/+4
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| | * | installing ALL the thingsHorea Christian2015-03-102-1/+4
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| | * | typoHorea Christian2015-03-042-1/+3
| | | | | | | | | | | | | | | | Package-Manager: portage-2.2.17
| | * | fixed doins pathHorea Christian2015-03-042-3/+7
| | | | | | | | | | | | | | | | Package-Manager: portage-2.2.17
| | * | removed slots, added new versionHorea Christian2015-03-044-1/+43
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| | * | added quotation marks, removed ori fileHorea Christian2015-02-183-54/+4
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| | * | added metadataHorea Christian2015-02-175-2/+67
| | | | | | | | | | | | | | | | Package-Manager: portage-2.2.17
| | * | Merge branch 'master' of https://github.com/gentoo-science/sci into spm-octaveHorea Christian2015-02-1784-2083/+2613
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| | * | | inlined URI_BASEHorea Christian2015-02-091-2/+1
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| | * | | Minor improvements + added metadata.xmlHorea Christian2015-02-091-1/+2
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| | * | | sci-biology/spm: switched order of RDEPEND and DEPEND; using SRC_URIChristian Burger2015-02-091-11/+6
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| | * | | Removed rm call for .../src/Horea Christian2015-02-091-3/+2
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