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* dev-python/MagnetoResistance-tool: enable py3.12HEADmasterAndrew Ammerlaan33 hours1-1/+1
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-physics/cernlib: split free and non-freeAlexander Puck Neuwirth3 days3-6/+26
| | | | | | Closes: https://github.com/gentoo/sci/pull/1265 Co-authored-by: Andrew Nowa Ammerlaan <andrewammerlaan@gentoo.org> Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* sci-physics/formcalc: fix chmod cannot accessAlexander Puck Neuwirth3 days2-14/+4
| | | | | Closes: https://github.com/gentoo/sci/pull/1264 Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* sci-biology/neuroconv: dependency revbumpHorea Christian10 days1-2/+3
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* sci-physics/qgraf: explicit die on fortran compileAlexander Puck Neuwirth10 days3-3/+3
| | | | Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* dev-vcs/datalad: drop 0.18.1, 0.18.3Andrew Ammerlaan11 days3-150/+0
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-physics/qgraf: add 3.4.2, 3.5.2, 3.6.7, drop 3.6.5, 3.6.6Alexander Puck Neuwirth12 days4-8/+37
| | | | Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* dev-vcs/dandi-cli: add 0.61.2Horea Christian14 days2-0/+82
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* sci-libs/torchvision: add 0.17.1Yiyang Wu2024-03-273-0/+82
| | | | | | | | | | | | | | | | Other changes compared to previous version: 1. Include a patch for ffmpeg 6.0 fix 2. Limit setuptools thread to 1, while ninja respect MAKEOPTS 3. revdump on ffmpeg because video_reader.so links to libavutil libavcodec libavformat 4. Drop dev-qt/qtcore dependency since not needed 5. Drop test support: missing dependency expecttest, problematic import issues: https://github.com/gentoo/sci/pull/1263#issuecomment-2021380600 Signed-off-by: Yiyang Wu <xgreenlandforwyy@gmail.com> Closes: https://github.com/gentoo/sci/pull/1263 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* profiles: unmasked packages with formerly missing depsHorea Christian2024-03-221-7/+0
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* sci-biology/afni: removed deprecated depsHorea Christian2024-03-222-2/+0
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* sci-physics/cernlib: new package, add 2023.10.31.0Alexander Puck Neuwirth2024-03-226-0/+153
| | | | | Closes: https://github.com/gentoo/sci/pull/1243 Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* profiles: unmasked packages with formerly missing depsHorea Christian2024-03-211-4/+0
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* sci-biology/neuroconv: version bump, treecleanHorea Christian2024-03-213-58/+7
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* dev-python/hdmf: version and PYTHON_COMPAT bump, treecleanHorea Christian2024-03-214-62/+3
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* dev-python/pynwb: add 2.6.0, drop 2.3.2Horea Christian2024-03-212-3/+10
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* dev-python/docstring-parser: new package, add 0.16Horea Christian2024-03-213-0/+35
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* dev-vcs/dandi-cli: version bump, dropped versions with removed depsHorea Christian2024-03-214-182/+4
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* dev-python/zarr_checksum: add 0.4.0Horea Christian2024-03-212-0/+27
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* dev-vcs/datalad: dropped boto dependencyHorea Christian2024-03-211-1/+0
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* dev-python/dandi-schema: drop 0.8.3-r1, 0.8.4Horea Christian2024-03-213-86/+0
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* sci-physics/rivet: moved to ::gentooAndrew Ammerlaan2024-03-208-312/+0
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-physics/pylhe: new package, add 0.7.0, 0.8.0Alexander Puck Neuwirth2024-03-205-0/+99
| | | | | Closes: https://github.com/gentoo/sci/pull/1262 Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* sci-physics/scikit-hep-testdata: new package, add 0.4.39Alexander Puck Neuwirth2024-03-203-0/+50
| | | | Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* sci-physics/uproot: new package, add 5.3.1Alexander Puck Neuwirth2024-03-203-0/+50
| | | | | Closes: https://github.com/gentoo/sci/pull/1261 Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* dev-python/awkward: add missing test dependencyAlexander Puck Neuwirth2024-03-191-0/+1
| | | | Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* sci-physics/particle: add 0.23.1, enable py3.12Alexander Puck Neuwirth2024-03-193-1/+46
| | | | Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* sci-libs/vegas: new package, add 6.0.1Alexander Puck Neuwirth2024-03-193-0/+44
| | | | Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* sci-libs/gvar: new package, add 13.0.2Alexander Puck Neuwirth2024-03-193-0/+42
| | | | Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* dev-python/awkward: new package, add 2.5.2Alexander Puck Neuwirth2024-03-193-0/+57
| | | | | Closes: https://github.com/gentoo/sci/pull/1257 Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* */*: fix BDEPEND -> DEPENDAlexander Puck Neuwirth2024-03-1826-26/+36
| | | | | Closes: https://github.com/gentoo/sci/pull/1260 Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* dev-python/vector: add 1.3.1Alexander Puck Neuwirth2024-03-172-0/+21
| | | | Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* dev-python/uhi: enable py3.12Alexander Puck Neuwirth2024-03-171-1/+1
| | | | Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* dev-python/boost-histogram: enable py3.12Alexander Puck Neuwirth2024-03-171-1/+1
| | | | Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* dev-python/jacobi: add 0.9.2Alexander Puck Neuwirth2024-03-162-0/+27
| | | | | Closes: https://github.com/gentoo/sci/pull/1258 Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* dev-python/awkward-cpp: new package, add 28Alexander Puck Neuwirth2024-03-163-0/+46
| | | | | | Co-authored-by: Andrew Nowa Ammerlaan <andrewammerlaan@gentoo.org> Closes: https://github.com/gentoo/sci/pull/1246 Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* mask packs with incomp depsAndrew Ammerlaan2024-03-151-0/+3
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* mask packs with incomp depsAndrew Ammerlaan2024-03-151-0/+8
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-physics/qgraf: add 3.6.6Alexander Puck Neuwirth2024-03-142-0/+33
| | | | | | Co-authored-by: Andrew Nowa Ammerlaan <andrewammerlaan@gentoo.org> Closes: https://github.com/gentoo/sci/pull/1253 Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* sci-physics/spheno: add 4.0.5Alexander Puck Neuwirth2024-03-144-10/+75
| | | | | Closes: https://github.com/gentoo/sci/pull/1254 Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* sci-physics/hepunits: add 2.3.3, python3_12Alexander Puck Neuwirth2024-03-143-1/+29
| | | | | Closes: https://github.com/gentoo/sci/pull/1255 Signed-off-by: Alexander Puck Neuwirth <alexander@neuwirth-informatik.de>
* dev-python/cadquery*: treecleanAndrew Ammerlaan2024-03-0810-365/+0
| | | | | | | | | Needs bump and port to newer python targets Work on-going in: https://github.com/gentoo/sci/pull/1211 Possibly re-add later. Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* dev-python/{numba*,llvmlite}: treecleanAndrew Ammerlaan2024-03-0827-919/+0
| | | | | | llvmlite is *still* stuck on llvm:14 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* dev-python/pytorch-lightning: treecleanAndrew Ammerlaan2024-03-084-48/+0
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* dev-python/numpy: drop duplicateAndrew Ammerlaan2024-03-084-262/+0
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* dev-python/schema: moved to ::gentooAndrew Ammerlaan2024-03-083-40/+0
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* dev-libs/oneDNN: moved to ::gentooAndrew Ammerlaan2024-03-085-194/+0
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* app-arch/libdeflate: moved to ::gentooAndrew Ammerlaan2024-03-088-185/+0
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@gentoo.org>
* sci-biology/fsl: updated C++ versionHorea Christian2024-02-291-2/+2
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>
* dev-python/ripser: unkeyword 0.6.4 for ~x86Horea Christian2024-02-281-1/+1
| | | | Signed-off-by: Horea Christian <chr@chymera.eu>