| Commit message (Collapse) | Author | Age | Files | Lines | |
|---|---|---|---|---|---|
| * | mpi.eclass: block multilib mpi from gx86 (bug #519700) |   Christoph Junghans | 2016-08-29 | 1 | -0/+3 |
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| * | sci-biology/vcftool: version bump; adjust to new build system |   Martin Mokrejš | 2016-08-26 | 4 | -99/+56 |
| | | | | | Package-Manager: portage-2.3.0 | ||||
| * | sci-biology/germline: new package | Martin Mokrejš | 2016-08-26 | 3 | -0/+48 |
| | | | | | Package-Manager: portage-2.3.0 | ||||
| * | sci-biology/vcflib: new package, works though is not ideal | Martin Mokrejš | 2016-08-26 | 2 | -0/+55 |
| | | | | | Package-Manager: portage-2.3.0 | ||||
| * | sci-biology/ncbi-blast+: Fix SLOT operators |   Justin Lecher | 2016-08-24 | 3 | -3/+3 |
| | | | | | | Package-Manager: portage-2.3.0 Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
| * | sci-biology/ncbi-blast+: Drop obsolete dep | Justin Lecher | 2016-08-24 | 3 | -3/+0 |
| | | | | | | Package-Manager: portage-2.3.0 Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
| * | Merge remote-tracking branch 'github/master' | Justin Lecher | 2016-08-23 | 2 | -0/+48 |
| |\ | | | | | | | | | * github/master: Psychopy - version bump (#659) | ||||
| | * | Psychopy - version bump (#659) |   Horea Christian | 2016-08-23 | 2 | -0/+48 |
| | | | | | | | | | | | | | | | | | | | | | | | | | | | | | * sci-biology/psychopy: vresion bump Package-Manager: portage-2.3.0 * sci-biology/psychopy: rordered deps Package-Manager: portage-2.3.0 * sci-biology/psychopy: added dep Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/ncbi-tools++: Fix SLOT operators | Justin Lecher | 2016-08-23 | 1 | -1/+1 |
| | | | | | | | | | | | Package-Manager: portage-2.3.0 Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
| * | | sci-biology/ncbi-tools++: Drop obsolete dep | Justin Lecher | 2016-08-23 | 1 | -1/+0 |
| | | | | | | | | | | | Package-Manager: portage-2.3.0 Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
| * | | sci-biology/igv-2.3.80: keep bundled mysql-connector-java-3.1.14-bin.jar | Martin Mokrejš | 2016-08-19 | 1 | -1/+1 |
| | | | | | | | | | Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/igv-2.3.80: add dependency on a yet non-existing ↵ | Martin Mokrejš | 2016-08-19 | 1 | -0/+1 |
| | | | | | | | | | | | | | >=dev-java/commons-compress:1.11 (Gentoo bug #535890) Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/igv-2.3.80: version bump, not working yet (upstream github ↵ | Martin Mokrejš | 2016-08-19 | 2 | -7/+9 |
| |/ | | | | | | issue #293) Package-Manager: portage-2.3.0 | ||||
| * | Merge remote-tracking branch 'github/master' | Justin Lecher | 2016-08-14 | 8 | -0/+187 |
| |\ | | | | | | | | | * github/master: dev-util/emscripten: version bump to 1.36.7 (#657) | ||||
| | * | dev-util/emscripten: version bump to 1.36.7 (#657) |   Harald Weiner | 2016-08-12 | 8 | -0/+187 |
| | | | | | | | Package manager: portage-2.2.28 | ||||
| * | | sci-libs/nipy: Add missing dep | Justin Lecher | 2016-08-14 | 2 | -2/+4 |
| |/ | | | | | | | Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=589312 Package-Manager: portage-2.3.0 Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
| * | sys-cluster/openmpi: remove old |   Justin Bronder | 2016-08-11 | 3 | -362/+0 |
| | | | | | Package-Manager: portage-2.2.26 | ||||
| * | sys-cluster/openmpi: bump 1.10.3 | Justin Bronder | 2016-08-11 | 2 | -0/+181 |
| | | | | | Package-Manager: portage-2.2.26 | ||||
| * | Nipype - version bump and EAPI upgrade (#656) | Horea Christian | 2016-08-08 | 5 | -4/+41 |
| | | | | | | | | | | | * sci-libs/nipype: version bump Package-Manager: portage-2.3.0 * sci-libs/nipype: updted EAPI version Package-Manager: portage-2.3.0 | ||||
| * | Merge remote-tracking branch 'github/master' | Justin Lecher | 2016-08-06 | 8 | -28/+176 |
| |\ | | | | | | | | | * github/master: Version bumps for sci-physics/geant-vmc and sci-physics/vgm (#655) | ||||
| | * | Version bumps for sci-physics/geant-vmc and sci-physics/vgm (#655) |   olifre | 2016-08-06 | 8 | -28/+176 |
| | | | | | | | | | | | | | | | | | | | | | * sci-physics/vgm: Bump to 4.3, update to EAPI 6. Package-Manager: portage-2.3.0 * sci-physics/geant-vmc: Bump to geant-vmc-4.3.3, adapt to changed upstream SRC URI, bump all geant-4 packages to EAPI 6. Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/maker: roughly install correctly the main part | Martin Mokrejš | 2016-08-02 | 1 | -3/+13 |
| | | | | | | | | | Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/maker: add some comments to the ebuild | Martin Mokrejš | 2016-08-02 | 1 | -1/+8 |
| | | | | | | | | | Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/plink: non-maintainer commit | Martin Mokrejš | 2016-08-02 | 2 | -13/+15 |
| | | | | | | | | | | | | | | | Re-add USE=lapack logic adjusted to current sources which got lost in plink-1.90_pre140514 , could work around bug #589068 Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/plink: actually add newer homepage (non-maintainer) | Martin Mokrejš | 2016-08-01 | 1 | -1/+2 |
| | | | | | | | | | Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/plink: version bump (non-maintainer) | Martin Mokrejš | 2016-08-01 | 3 | -0/+72 |
| | | | | | | | | | Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/msautil: respect CFLAGS | Martin Mokrejš | 2016-08-01 | 1 | -0/+4 |
| | | | | | | | | | Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/fas: new package, maybe public-domain license? | Martin Mokrejš | 2016-08-01 | 3 | -0/+35 |
| | | | | | | | | | Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/ensembl-tools: tune HOMEPAGE URL | Martin Mokrejš | 2016-08-01 | 1 | -2/+2 |
| | | | | | | | | | Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/SnpEff: re-order dependencies, back to EAPI=5 | Martin Mokrejš | 2016-08-01 | 1 | -5/+6 |
| | | | | | | | | | Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/ensembl-tools: add more dependencies | Martin Mokrejš | 2016-08-01 | 1 | -2/+4 |
| | | | | | | | | | Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/ensembl-tools: there are no *.pm to be installed, install example | Martin Mokrejš | 2016-08-01 | 1 | -2/+4 |
| | | | | | | | | | Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/gbench: add media-libs/ftgl to deps | Martin Mokrejš | 2016-08-01 | 1 | -2/+3 |
| | | | | | | | | | Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/twinscan: remove test.pl from the right place | Martin Mokrejš | 2016-08-01 | 1 | -1/+1 |
| | | | | | | | | | Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/plinkseq: plugin.proto:74:12: FileDescriptorProto is not defined | Martin Mokrejš | 2016-08-01 | 1 | -2/+10 |
| | | | | | | | | | Package-Manager: portage-2.3.0 | ||||
| * | | sci-biology/SnpEff: fix indentation | Martin Mokrejš | 2016-08-01 | 1 | -1/+1 |
| |/ | | | | Package-Manager: portage-2.3.0 | ||||
| * | Raise min req for eselect | Justin Lecher | 2016-07-31 | 1 | -1/+1 |
| | | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
| * | sci-biology/staden: version bump, beta10-zlib.patch patch not needed now | Martin Mokrejš | 2016-07-31 | 3 | -0/+114 |
| | | | | | Package-Manager: portage-2.3.0 | ||||
| * | sci-biology/vcftools: version bump | Martin Mokrejš | 2016-07-31 | 4 | -0/+110 |
| | | | | | Package-Manager: portage-2.3.0 | ||||
| * | sci-biology/stampy: renamed to stampy-bin | Martin Mokrejš | 2016-07-31 | 3 | -46/+0 |
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| * | app-admin/eselect: Version Bump | Justin Lecher | 2016-07-31 | 3 | -1/+1 |
| | | | | | | | | fixes gentoo-science/sci#637 Package-Manager: portage-2.3.0 Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
| * | sci-biology/graf-bin: fix shebang line, inherit perl-module | Martin Mokrejš | 2016-07-31 | 1 | -0/+6 |
| | | | | | Package-Manager: portage-2.3.0 | ||||
| * | sci-biology/stampy-bin: working ebuild thanks to soap@g.o | Martin Mokrejš | 2016-07-31 | 3 | -0/+56 |
| | | | | | Package-Manager: portage-2.3.0 | ||||
| * | sci-biology/stampy: install shared library into site-packages | Martin Mokrejš | 2016-07-31 | 1 | -5/+6 |
| | | | | | Package-Manager: portage-2.3.0 | ||||
| * | sci-biology/gbench: version bump; run configure; does not compile | Martin Mokrejš | 2016-07-30 | 2 | -6/+18 |
| | | | | | Package-Manager: portage-2.3.0 | ||||
| * | sci-biology/ensembl-tools: add another link to a HOMEPAGE | Martin Mokrejš | 2016-07-29 | 1 | -1/+2 |
| | | | | | Package-Manager: portage-2.3.0 | ||||
| * | sci-biology/ensembl-tools: new package, needs more fixes, upstream contacted | Martin Mokrejš | 2016-07-29 | 3 | -0/+60 |
| | | | | | Package-Manager: portage-2.3.0 | ||||
| * | dev-perl/Bio-DB-HTS: new package, needs more fixes | Martin Mokrejš | 2016-07-29 | 3 | -0/+41 |
| | | | | | Package-Manager: portage-2.3.0 | ||||
| * | sci-biology/twinscan: do not install test.pl, keep track of file collision | Martin Mokrejš | 2016-07-29 | 1 | -2/+5 |
| | | | | | Package-Manager: portage-2.3.0 | ||||
| * | sci-biology/graf-bin: new binary package | Martin Mokrejš | 2016-07-28 | 3 | -0/+44 |
| | | | | | Package-Manager: portage-2.2.28 | ||||
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