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* sci-libs/cblas-reference: fix for issue #60 (#752)François Bissey2017-03-142-3/+8
| | | Package-Manager: portage-2.3.3
* Add new gmsh ebuild. (#724)Marek Wojciechowski2017-03-142-0/+94
| | | | | | * Add new gmsh ebuild. * Move doc compilation to src_compile
* sci-mathematics/axel: added new ebuild (#744)Harald Weiner2017-03-1416-0/+374
| | | | | | | | | | | | | | | | | | | | * sci-libs/dtk: added new ebuild Package-manager: portage-2.3.3 repoman-2.3.1 * sci-mathematics/axel: added new ebuild Package-manager: portage-2.3.3 repoman-2.3.1 * sci-mathematics/axel-vtkview: added new ebuild Package-manager: portage-2.3.3 repoman-2.3.1 * sci-libs/dtk,sci-mathematics/axel,sci-mathematics/axel-vtkview: added new ebuilds (updates for requested changes) * sci-libs/dtk,sci-mathematics/axel,sci-mathematics/axel-vtkview: added new ebuilds (updates for requested changes, added a required use-flag) Package-manager: portage-2.3.3 repoman-2.3.1
* dev-tex/pythontex: version bump (#736)Horea Christian2017-03-112-0/+56
| | | | | | | | | | * dev-tex/pythontex: version bump Package-Manager: Portage-2.3.3, Repoman-2.3.1 * dev-tex/pythontex: migrated to EAPI 6 Package-Manager: Portage-2.3.3, Repoman-2.3.1
* sci-visualization/surf-ice: added stable version (#737)Horea Christian2017-03-112-0/+45
| | | | | | | | | | * sci-visualization/surf-ice: added stable version Package-Manager: Portage-2.3.3, Repoman-2.3.1 * sci-visualization/surf-ice: removed CVS tag Package-Manager: Portage-2.3.3, Repoman-2.3.1
* dev-python/matplotlib2tikz: Update live ebuildMarius Brehler2017-03-101-0/+3
| | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* dev-python/matplotlib2tikz: Moved to treeMarius Brehler2017-03-103-52/+0
| | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* Merge branch 'master' of ssh://github.com/gentoo-science/sciChristoph Junghans2017-03-092-2/+7
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| * sci-misc/praat: Version bump (#746)Pavel Denisov2017-03-092-2/+7
| | | | | | | | | | Respect system CFLAGS/CXXFLAGS Package-Manager: Portage-2.3.4, Repoman-2.3.2
* | sci-physics/quinoa: updated depsChristoph Junghans2017-03-091-1/+2
| | | | | | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* | dev-util/mad-numdiff: initial commitChristoph Junghans2017-03-093-0/+32
|/ | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* sci-libs/gsl: restore keywords to its original state in 2.3François Bissey2017-03-081-1/+1
| | | | Package-Manager: portage-2.3.3
* sci-libs/gsl: use run_in_build_dir instead of cd ${BUILDDIR}. Move 2.3-r1 to ↵François Bissey2017-03-082-31/+11
| | | | | | 2.3 to ease review. Package-Manager: portage-2.3.3
* sci-libs/gsl: mv 2.1 to 2.1-r1 to ease comparisonFrançois Bissey2017-03-081-0/+0
| | | | Package-Manager: portage-2.3.3
* sci-libs/gsl: remove int64 support since it doesn't exist upstream. Bump the ↵François Bissey2017-03-086-1550/+175
| | | | | | ebuild as the current one produce broken install for the gslcblas alternative. Package-Manager: portage-2.3.3
* Remove MULTILIB_COMPAT restriction from numeric-int64-multibuild eclassFrançois Bissey2017-03-071-2/+0
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* virtual/scalapack: Remove MULTILIB_COMPAT restrictionFrançois Bissey2017-03-071-3/+1
| | | | Package-Manager: portage-2.3.3
* virtual/lapacke: Remove MULTILIB_COMPAT restrictionFrançois Bissey2017-03-071-3/+1
| | | | Package-Manager: portage-2.3.3
* virtual/lapack: Remove MULTILIB_COMPAT restrictionFrançois Bissey2017-03-072-5/+1
| | | | Package-Manager: portage-2.3.3
* virtual/cblas: Remove MULTILIB_COMPAT restrictionFrançois Bissey2017-03-073-8/+2
| | | | Package-Manager: portage-2.3.3
* virtual/blas: Remove MULTILIB_COMPAT restrictionFrançois Bissey2017-03-073-8/+2
| | | | Package-Manager: portage-2.3.3
* virtual/blacs: Remove MULTILIB_COMPAT restrictionFrançois Bissey2017-03-071-3/+1
| | | | Package-Manager: portage-2.3.3
* dev-python/matplotlib2tikz: Version bump to 0.6.2Marius Brehler2017-03-063-0/+42
| | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* dev-python/matplotlib2tikz: Drop 0.6.0Marius Brehler2017-03-062-25/+0
| | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* dev-python/arrayfire-python: Version bump to 3.4.20170222Marius Brehler2017-03-062-0/+27
| | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* Merge remote-tracking branch 'github/master'Marius Brehler2017-03-066-2/+94
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| * sci-libs/nipype: missing dependency (#742)Horea Christian2017-03-051-2/+3
| | | | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
| * sci-mathematics/mathics: new ebuild (#735)Сухарик2017-03-023-0/+50
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| * dev-util/numdiff: version bump to 5.9.0Matthias Maier2017-02-282-0/+41
| | | | | | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* | sci-biology/hisat2: new packageMartin Mokrejš2017-03-014-0/+117
|/ | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* Merge remote-tracking branch 'github/master'Justin Lecher2017-02-2817-110/+133
|\ | | | | | | | | | | | | | | * github/master: sci-mathematics/gismo: version bump (#743) dev-util/emscripten: version bump to 1.37.3 sci-misc/sfst: Version bump (#740) sci-misc/openfst: Version bump (#739)
| * sci-mathematics/gismo: version bump (#743)Harald Weiner2017-02-285-102/+11
| | | | | | Package-manager: portage-2.3.3 repoman-2.3.1
| * Merge pull request #741 from timeraider4u/emscriptenMarius Brehler2017-02-288-8/+7
| |\ | | | | | | dev-util/emscripten: version bump to 1.37.3
| | * dev-util/emscripten: version bump to 1.37.3Harald Weiner2017-02-278-8/+7
| |/ | | | | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
| * sci-misc/sfst: Version bump (#740)Pavel Denisov2017-02-272-0/+84
| | | | | | | | | | | | Bump to EAPI 6 Update HOMEPAGE and SRC_URI Package-Manager: Portage-2.3.3, Repoman-2.3.1
| * sci-misc/openfst: Version bump (#739)Pavel Denisov2017-02-272-0/+31
| | | | | | | | | | | | Bump to EAPI 6 Enable extensions Package-Manager: Portage-2.3.3, Repoman-2.3.1
* | sci-biology/gbench: version bumpMartin Mokrejš2017-02-272-2/+2
|/ | | | | | | | | | | Does not compile for me like previous 2.10.7, upstream contacted In file included from gbench-src-2.11.7/src/gui/opengl/glutbitmap.h:15:0, from gbench-src-2.11.7/src/gui/opengl/ncbi_12x24.c:4: gbench-src-2.11.7/include/gui/opengl.h:59:23: error: unknown type name 'GLEWContext' NCBI_GUIOPENGL_EXPORT GLEWContext* glewGetContext(); Package-Manager: Portage-2.3.3, Repoman-2.3.1
* Merge branch 'master' of ssh://github.com/gentoo-science/sciChristoph Junghans2017-02-261-1/+1
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| * sci-libs/htslib: Remove KEYWORDS due to being brokenDavid Seifert2017-02-261-1/+1
| | | | | | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* | sci-physics/quinoa: fix depsChristoph Junghans2017-02-261-1/+1
| | | | | | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* | sci-biology/gbench and sci-biology/ncbi-tools++: do not download ncbi-vdbMartin Mokrejš2017-02-262-3/+22
| | | | | | | | | | | | Do not download sources from github during configure phase. This disables the feature completely. Somehow it does not find vdb binaries provided by our sci-biology/ncbi-tools++ package?
* | sci-biology/flexbar: remove spacesMartin Mokrejš2017-02-261-1/+1
| | | | | | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1
* | sci-biology/flexbar: version bumpMartin Mokrejš2017-02-263-24/+34
|/ | | | | | https://github.com/seqan/flexbar/issues/8 Package-Manager: Portage-2.3.3, Repoman-2.3.1
* Drop more ancient CVS HeaderJustin Lecher2017-02-261-2/+1
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* dev-python/metakernel: QA Sort ebuild and drop CVS headerJustin Lecher2017-02-263-9/+11
| | | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-biology/KaKs_Calculator: Bump to EAPI=6Justin Lecher2017-02-262-5/+7
| | | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-biology/Atlas2: Bump Ruby version and EAPIJustin Lecher2017-02-261-2/+2
| | | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* No sources specifiedJustin Lecher2017-02-262-59/+0
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* dev-perl/Lab-Instrument: Fix broken dependencyJustin Lecher2017-02-261-3/+3
| | | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* dev-python/metakernel: version bump to 0.18.4.Benda Xu2017-02-262-0/+38
| | | | Package-Manager: Portage-2.3.3, Repoman-2.3.1