Commit message (Collapse) | Author | Age | Files | Lines | |
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* | sci-libs/dealii: version bump to 9.0.1 | Matthias Maier | 2018-10-11 | 2 | -3/+3 |
| | | | | | Signed-off-by: Matthias Maier <tamiko@gentoo.org> Package-Manager: Portage-2.3.50, Repoman-2.3.11 | ||||
* | sci-libs/gmsh: version bump to 4.0.2 | Matthias Maier | 2018-10-10 | 2 | -0/+94 |
| | | | | | Signed-off-by: Matthias Maier <tamiko@gentoo.org> Package-Manager: Portage-2.3.50, Repoman-2.3.11 | ||||
* | dev-cpp/kokkos: initial commit | Christoph Junghans | 2018-10-04 | 3 | -0/+56 |
| | | | | | Package-Manager: Portage-2.3.49, Repoman-2.3.10 Signed-off-by: Christoph Junghans <ottxor@gentoo.org> | ||||
* | sci-libs/libxc: moved to gx86 | Christoph Junghans | 2018-10-02 | 5 | -202/+0 |
| | | | | Signed-off-by: Christoph Junghans <ottxor@gentoo.org> | ||||
* | sci-mathematics/slepc: version bump to 3.10.0 | Matthias Maier | 2018-10-01 | 2 | -2/+2 |
| | | | | Package-Manager: Portage-2.3.49, Repoman-2.3.10 | ||||
* | sci-libs/nipype: corrected dep | Horea Christian | 2018-09-26 | 1 | -0/+1 |
| | | | | Package-Manager: Portage-2.3.49, Repoman-2.3.10 | ||||
* | sci-visualization/surf-ice: updated live ebuild | Horea Christian | 2018-09-24 | 1 | -2/+5 |
| | | | | Package-Manager: Portage-2.3.49, Repoman-2.3.10 | ||||
* | sci-visualization/surf-ice: version bump | Horea Christian | 2018-09-24 | 2 | -0/+46 |
| | | | | Package-Manager: Portage-2.3.49, Repoman-2.3.10 | ||||
* | sci-visualization/mricrogl: updated live ebuild | Horea Christian | 2018-09-24 | 1 | -2/+5 |
| | | | | Package-Manager: Portage-2.3.49, Repoman-2.3.10 | ||||
* | sci-visualization/mricrogl: version bump | Horea Christian | 2018-09-24 | 2 | -0/+45 |
| | | | | Package-Manager: Portage-2.3.49, Repoman-2.3.10 | ||||
* | sci-mathematics/petsc: version bump to 3.10.0 | Matthias Maier | 2018-09-17 | 2 | -0/+197 |
| | | | | Package-Manager: Portage-2.3.49, Repoman-2.3.10 | ||||
* | sci-mathematics/petsc: drop old 3.9* | Matthias Maier | 2018-09-17 | 3 | -394/+0 |
| | | | | Package-Manager: Portage-2.3.49, Repoman-2.3.10 | ||||
* | sci-mathematics/petsc: version bump to 3.9.4 | Matthias Maier | 2018-09-17 | 2 | -0/+197 |
| | | | | Package-Manager: Portage-2.3.49, Repoman-2.3.10 | ||||
* | sci-biology/abyss: version bump | Martin Mokrejs | 2018-09-11 | 3 | -0/+73 |
| | | | | | | | | An improved version with sealer using OpenMP+OpenMPI now. https://github.com/bcgsc/abyss/releases/tag/2.1.1 Package-Manager: Portage-2.3.48, Repoman-2.3.10 | ||||
* | sci-biology/genometools: remove comment | Martin Mokrejs | 2018-09-11 | 1 | -1/+0 |
| | | | | Package-Manager: Portage-2.3.48, Repoman-2.3.10 | ||||
* | sci-biology/genometools: add missing dependency on dev-lua/lua-md5 | Martin Mokrejs | 2018-09-11 | 1 | -1/+2 |
| | | | | Package-Manager: Portage-2.3.48, Repoman-2.3.10 | ||||
* | dev-lua/lua-md5: new package needed by sci-biology/genometools | Martin Mokrejs | 2018-09-11 | 4 | -0/+53 |
| | | | | | | I am not interested in maintaining this any further. Package-Manager: Portage-2.3.48, Repoman-2.3.10 | ||||
* | sys-cluster/openmpi: dep on v1 hwloc | Justin Bronder | 2018-09-11 | 5 | -5/+5 |
| | | | | Package-Manager: Portage-2.3.40, Repoman-2.3.9 | ||||
* | sci-biology/amos: adjust to SLOTed jellyfish and drop qt4 | Martin Mokrejs | 2018-09-11 | 3 | -13/+71 |
| | | | | | | | | | | | | | | | | | Jellyfish resides in ${EPREFIX}/usr/include/jellyfish1/ now. The package needed qt4 with qt3support enabled to compile hawkeye utility. Let's try with qt5 core only. Also enabling compilation of all utilities if they pass configure checks. Currently, jellyfish linking fails with some cxx linking error, maybe my -lm or -lpthreads needs to be recompiled with gcc-8.2.0 too? Also, boot is somehow not picked up. Bug: https://bugs.gentoo.org/show_bug.cgi?id=663110 Package-Manager: Portage-2.3.48, Repoman-2.3.10 | ||||
* | sci-biology/jellyfish: remove doubled econf call | Martin Mokrejs | 2018-09-11 | 5 | -5/+5 |
| | | | | Package-Manager: Portage-2.3.48, Repoman-2.3.10 | ||||
* | sci-biology/ngsview: drop an outdated package requiring qt3 | Martin Mokrejs | 2018-09-10 | 3 | -50/+0 |
| | | | | | | | | | | | The was masked out and was written for qt3. It is unclear if it would compile using newer qmake. Also, sys-libs/db-4.3:*[cxx] dependency would have to be improved and inlcude and libdir paths would need to be inserted into the Makefiles. Removing. Bug: https://bugs.gentoo.org/663110 | ||||
* | sci-biology/ngsview: document last ebuild | Martin Mokrejs | 2018-09-10 | 2 | -8/+9 |
| | | | | Package-Manager: Portage-2.3.48, Repoman-2.3.10 | ||||
* | sci-biology/ugene: drop old versions. | Benda Xu | 2018-09-10 | 3 | -70/+0 |
| | | | | | Bug: https://bugs.gentoo.org/663110 Package-Manager: Portage-2.3.48, Repoman-2.3.10 | ||||
* | media-gfx/librecad: Newver version in tree | Alexey Shvetsov | 2018-09-06 | 7 | -268/+0 |
| | | | | Package-Manager: Portage-2.3.47, Repoman-2.3.10 | ||||
* | sci-libs/spams-python: added test suite | Horea Christian | 2018-09-05 | 1 | -0/+4 |
| | | | | Package-Manager: Portage-2.3.48, Repoman-2.3.10 | ||||
* | sci-libs/spams-python: new package | Horea Christian | 2018-09-04 | 3 | -0/+80 |
| | | | | Package-Manager: Portage-2.3.48, Repoman-2.3.10 | ||||
* | sci-libs/trilinos: fix compilation with superlu 5 | Matthias Maier | 2018-08-31 | 2 | -0/+162 |
| | | | | Package-Manager: Portage-2.3.48, Repoman-2.3.10 | ||||
* | sci-mathematics/petsc: version bump to 3.9.3 | Matthias Maier | 2018-08-30 | 2 | -0/+197 |
| | | | | Package-Manager: Portage-2.3.48, Repoman-2.3.10 | ||||
* | sci-mathematics/petsc: remove obsolete patches | Matthias Maier | 2018-08-30 | 6 | -273/+0 |
| | | | | Package-Manager: Portage-2.3.48, Repoman-2.3.10 | ||||
* | sci-mathematics/petsc: drop old | Matthias Maier | 2018-08-30 | 2 | -197/+0 |
| | | | | Package-Manager: Portage-2.3.48, Repoman-2.3.10 | ||||
* | eclass/intel-sdp-r1: Add path_exists workaround | Matthias Maier | 2018-08-30 | 1 | -7/+41 |
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* | dev-python/pynrrd: EAPI and PYTHON_COMPAT bump | Horea Christian | 2018-08-29 | 1 | -2/+2 |
| | | | | Package-Manager: Portage-2.3.45, Repoman-2.3.10 | ||||
* | sys-cluster/openmpi: bump 3.1.2 | Justin Bronder | 2018-08-27 | 2 | -1/+1 |
| | | | | Package-Manager: Portage-2.3.40, Repoman-2.3.9 | ||||
* | No longer separately downloading installed files | Horea Christian | 2018-08-20 | 1 | -3/+2 |
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* | sys-cluster/openmpi: bump 2.1.5 | Justin Bronder | 2018-08-20 | 2 | -1/+1 |
| | | | | Package-Manager: Portage-2.3.40, Repoman-2.3.9 | ||||
* | corrected path | Horea Christian | 2018-08-20 | 1 | -0/+0 |
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* | Distributing LAPACK migration files alongside overlay | Horea Christian | 2018-08-20 | 3 | -2/+42 |
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* | BLAS/LAPACK migration instructions | Horea Christian | 2018-08-17 | 1 | -0/+12 |
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* | Typo | Horea Christian | 2018-08-16 | 1 | -1/+1 |
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* | Formatting improvements and install instructions | Horea Christian | 2018-08-14 | 1 | -6/+27 |
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* | sys-cluster/openmpi: bump 2.1.4 | Justin Bronder | 2018-08-13 | 2 | -1/+1 |
| | | | | Package-Manager: Portage-2.3.40, Repoman-2.3.9 | ||||
* | sci-libs/nipype: added testing dep | Horea Christian | 2018-08-11 | 3 | -1/+4 |
| | | | | Package-Manager: Portage-2.3.45, Repoman-2.3.10 | ||||
* | sci-libs/nipype: version bump | Horea Christian | 2018-08-10 | 2 | -0/+54 |
| | | | | Package-Manager: Portage-2.3.45, Repoman-2.3.10 | ||||
* | sci-libs/nipype: version bump | Horea Christian | 2018-08-09 | 2 | -0/+54 |
| | | | | Package-Manager: Portage-2.3.44, Repoman-2.3.10 | ||||
* | sci-libs/nipype: EAPI and PYTHON_COMPAT bump | Horea Christian | 2018-08-09 | 1 | -3/+3 |
| | | | | Package-Manager: Portage-2.3.44, Repoman-2.3.10 | ||||
* | Style improvements and better links. | Horea Christian | 2018-08-03 | 1 | -8/+5 |
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* | sci-biology/nilearn: fixed tests | Horea Christian | 2018-08-02 | 4 | -6/+51 |
| | | | | Package-Manager: Portage-2.3.44, Repoman-2.3.10 | ||||
* | sci-biology/nilearn: version bump | Horea Christian | 2018-08-02 | 2 | -0/+52 |
| | | | | Package-Manager: Portage-2.3.44, Repoman-2.3.10 | ||||
* | sci-biology/nilearn: EAPI and PYTHON_COMPAT bump | Horea Christian | 2018-08-02 | 2 | -4/+4 |
| | | | | Package-Manager: Portage-2.3.44, Repoman-2.3.10 | ||||
* | sci-libs/pybids: EAPI and PYTHON_COMPAT bump | Horea Christian | 2018-08-02 | 1 | -2/+2 |
| | | | | Package-Manager: Portage-2.3.44, Repoman-2.3.10 |