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* dev-java/flexdock: remove RedundantLongDescriptionAndrew Ammerlaan2021-03-041-3/+0
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/netcdf: EAPI bump, fix buildAndrew Ammerlaan2021-03-031-18/+21
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/jrosetta: EAPI bumpAndrew Ammerlaan2021-03-031-5/+5
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/jogl: drop oldAndrew Ammerlaan2021-03-032-73/+0
| | | | | | | scilab only works with 2.2.4 anyway Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/jogl: EAPI bumpAndrew Ammerlaan2021-03-031-2/+3
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/jlatexmath-fop: EAPI bumpAndrew Ammerlaan2021-03-032-9/+12
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/jlatexmath: EAPI bumpAndrew Ammerlaan2021-03-031-5/+4
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/gluegen: also EAPI bump old versionAndrew Ammerlaan2021-03-037-26/+28
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* Revert "dev-java/gluegen: drop old"Andrew Ammerlaan2021-03-032-0/+68
| | | | | | | This reverts commit 7fbdaa9a64dea91d504889987eec93c1f32d2a7a. Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/gluegen: drop oldAndrew Ammerlaan2021-03-032-68/+0
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/gluegen: fix build, EAPI bumpAndrew Ammerlaan2021-03-037-23/+31
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/flexdock: drop oldAndrew Ammerlaan2021-03-032-49/+0
| | | | | | | scilab only works with the 1.2.4 version anyway Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/flexdock: EAPI bumpAndrew Ammerlaan2021-03-031-9/+11
| | | | | Package-Manager: Portage-3.0.16, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/flexdock: update homepageAndrew Ammerlaan2021-01-202-6/+6
| | | | | Package-Manager: Portage-3.0.13, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/jrosetta: update homepageAndrew Ammerlaan2021-01-191-2/+2
| | | | | Package-Manager: Portage-3.0.13, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/netcdf: add dep on app-arch/unzipAndrew Ammerlaan2021-01-191-0/+1
| | | | | Package-Manager: Portage-3.0.13, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/jlatexmath-fop: add dep on unzipAndrew Ammerlaan2021-01-191-1/+2
| | | | | Package-Manager: Portage-3.0.13, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/hdf-java: remove obsolete packAndrew Ammerlaan2021-01-195-282/+0
| | | | Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/netcdf: use https for homepageAndrew Ammerlaan2021-01-131-2/+2
| | | | | Package-Manager: Portage-3.0.13, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/jogl: use https for homepageAndrew Ammerlaan2021-01-132-4/+4
| | | | | Package-Manager: Portage-3.0.13, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/gluegen: use https for homepageAndrew Ammerlaan2021-01-132-4/+4
| | | | | Package-Manager: Portage-3.0.13, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net>
* dev-java/jeuclid-core: EAPI bump, version bump, add keywordAndrew Ammerlaan2021-01-034-40/+27
| | | | | | | Package-Manager: Portage-3.0.12, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net> Signed-off-by: Horea Christian <chr@chymera.eu> Closes: https://github.com/gentoo/sci/pull/1024
* dev-java/jgraphx: EAPI bump, version bumpAndrew Ammerlaan2021-01-034-104/+11
| | | | | | Package-Manager: Portage-3.0.12, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net> Signed-off-by: Horea Christian <chr@chymera.eu>
* dev-java/fits: version bump 1.15.1, EAPI bumpAndrew Ammerlaan2020-12-307-557/+28
| | | | | | | | | | | | can't get the PN-src to compile, the build.xml probably needs to be updated. This now installs the pre-compiled version instead, maybe later we can switch back to the -src version Package-Manager: Portage-3.0.12, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net> Closes: https://github.com/gentoo/sci/pull/1004 Signed-off-by: Aisha Tammy <gentoo@aisha.cc>
* */* misc fixes to make repoman happierAndrew Ammerlaan2020-12-294-10/+9
| | | | | | | | | | | | | | - http to https where possible - remove some blank lines - quote unqouted variables - fdo-mime to xdg-utils - clean up profiles/ - clean up licenses Package-Manager: Portage-3.0.12, Repoman-3.0.2 Signed-off-by: Andrew Ammerlaan <andrewammerlaan@riseup.net> Closes: https://github.com/gentoo/sci/pull/999 Signed-off-by: Aisha Tammy <gentoo@aisha.cc>
* dev-java/scirenderer: removed old packageHorea Christian2020-09-253-51/+0
| | | | | Package-Manager: Portage-3.0.8, Repoman-3.0.1 Signed-off-by: Horea Christian <chr@chymera.eu>
* dev-java/jogl: removed old versionsHorea Christian2020-09-253-176/+0
| | | | | Package-Manager: Portage-3.0.8, Repoman-3.0.1 Signed-off-by: Horea Christian <chr@chymera.eu>
* dev-java/gluegen: Removed old versionsHorea Christian2020-09-253-144/+0
| | | | | Package-Manager: Portage-3.0.8, Repoman-3.0.1 Signed-off-by: Horea Christian <chr@chymera.eu>
* dev-java/htsjdk: drop old 2.1.0 versionMartin Mokrejs2019-03-251-47/+0
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* dev-java/htsjdk: 2.3.0 which was the last using Apache antMartin Mokrejs2019-03-255-12/+14
| | | | | | | | | | | | | | | | | Bump to EAPI7 Building does not work since sandbox has now no network access. Downloading https://services.gradle.org/distributions/gradle-5.2.1-bin.zip Exception in thread "main" java.net.SocketException: Network is unreachable (connect failed) htsjdk calls some `gradlew` wrapper so the recent ebuilds need more work to use dev-java/gradle-bin package. Package-Manager: Portage-2.3.62, Repoman-2.3.12 Signed-off-by: Martin Mokrejs <mmokrejs@fold.natur.cuni.cz>
* Sort keywordsJustin Lecher2018-10-275-5/+5
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* dev-java/netcdf: Fix depsJustin Lecher2018-06-211-3/+3
| | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org> Package-Manager: Portage-2.3.40, Repoman-2.3.9
* Update Manifests to new hashesJustin Lecher2017-12-1013-22/+22
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Second try to clean spaces in metadata.xmlJustin Lecher2017-11-1811-41/+41
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Consistently ident with tabsJustin Lecher2017-11-1811-70/+70
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Drop keyqords due to unmet dependecyJustin Lecher2017-11-181-1/+1
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Cleanup remote IDsJustin Lecher2017-04-304-7/+6
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Update remote idsJustin Lecher2017-04-291-1/+2
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Drop leftover from CVS in HEADERJustin Lecher2017-02-2525-25/+0
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Drop quoting form EAPIJustin Lecher2017-02-054-4/+4
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Drop all trailing whitespacesJustin Lecher2017-02-051-1/+1
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Drop "." from DESCRIPTIONJustin Lecher2017-02-054-4/+4
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* dev-java/htsjdk: add a live ebuild, add a noteMartin Mokrejš2017-01-122-2/+55
| | | | | | | | Not sure if current build system still creates $HOME/.git but from reading github Issues it seem it is still needed: users are even asked to run 'git clone' to work around the issue when gradle fails to do that. Package-Manager: Portage-2.3.3, Repoman-2.3.1
* dev-java/htsjdk: make gradle use relocated $HOME/.gradle/ inside sanbox pathsMartin Mokrejš2016-07-121-1/+3
| | | | | | | This dies later because .git/ directory does not exist (probably $HOME/.git/ was looked up). Package-Manager: portage-2.2.28
* dev-java/htsjdk: added 2.1.0 version needed=bundled so far in cramtools-3.0Martin Mokrejš2016-07-122-0/+49
| | | | Package-Manager: portage-2.2.28
* dev-java/htsjdk: re-added back 2.2.2 version due to picard-2Martin Mokrejš2016-07-122-0/+49
| | | | Package-Manager: portage-2.2.28
* dev-java/htsjdk: version bump, moved from ant to gradle, SANDBOX VIOLATIONMartin Mokrejš2016-07-122-4/+7
| | | | Package-Manager: portage-2.2.28
* dev-java/htsjdk: Fixed error with EAPI=6Johann Schmitz2016-04-241-0/+1
| | | | Package-Manager: portage-2.2.26
* dev-java/htsjdk: New ebuild (dependency of picard-2)Johann Schmitz2016-04-243-0/+63
| | | | Package-Manager: portage-2.2.26
* removed all healpix packages now in main treeSébastien Fabbro2016-04-073-61/+0
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