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* sci-biology/gbrowse-2.48: added dependency on <=sci-biology/primer3-2, per ↵Martin Mokrejs2012-02-281-0/+1
| | | | | | http://generic-model-organism-system-database.450254.n5.nabble.com/PrimerDesigner-working-in-2-40-tp4724773p5479669.html (Portage version: 2.1.10.49/git/Linux x86_64, unsigned Manifest commit)
* version bump and some fixes so that it works with webappconfig again?Martin Mokrejs2012-01-171-0/+1
| | | | (Portage version: 2.1.10.44/git/Linux i686, unsigned Manifest commit)
* sci-biology/gbrowse: added dev-perl/TermReadKey to dependenciesMartin Mokrejs2012-01-171-11/+11
| | | | (Portage version: 2.1.10.43/git/Linux i686, unsigned Manifest commit)
* Convert to thin manifests (as suggested by alexxy and jlec)Andreas K. Huettel (dilfridge)2012-01-141-12/+0
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* Make sure portage does not run gbrowse_metadb_config.pl otherwise sandbox ↵Martin Mokrejs2011-07-301-2/+5
| | | | | | violation occurs when modifying /var/www/gbrowse2/databases/users.sqlite* file, maybe we could copy these during src_install to the {}, fix there and copy back to live filesystem? Improve error handling in gbrowse_metadb_config.pl. Fix symlink creation during install procedure. (Portage version: 2.1.10.7/git/Linux i686, unsigned Manifest commit)
* sci-biology/gbrowse: add missing brackets cause a perl error while exporting ↵Martin Mokrejs2011-07-301-2/+3
| | | | | | a PNG image (Portage version: 2.1.10.7/git/Linux i686, unsigned Manifest commit)
* sci-biology/gbrowse: fix typo in an ewarn() messageMartin Mokrejs2011-07-301-1/+1
| | | | (Portage version: 2.1.10.7/git/Linux i686, unsigned Manifest commit)
* sci-biology/gbrowse: added support for --destdir, patch sent to upstreamMartin Mokrejs2011-07-301-2/+3
| | | | (Portage version: 2.1.10.7/git/Linux i686, unsigned Manifest commit)
* version bump but still need to rewrite upstream's install procedure to ↵Martin Mokrejs2011-07-301-4/+4
| | | | | | prevent 'mkdir /var/lib/gbrowse2' from happening (Portage version: 2.1.10.7/git/Linux i686, unsigned Manifest commit)
* sci-biology/gbrowse-2.38: added URL to Bio::DB::SamMartin Mokrejs2011-07-081-1/+1
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* sci-biology/gbrowse-2.38: Documented dependency on ↵Martin Mokrejs2011-07-081-12/+2
| | | | | | >=perl-gcpan/Text-ParseWords-3.27, documented requirement of Bio::Root::Version >= 1.0069 (Portage version: 2.1.10.4/git/Linux i686, unsigned Manifest commit)
* Version BumpJustin Lecher2011-06-261-11/+7
| | | | (Portage version: 2.2.0_alpha41/git/Linux x86_64, signed Manifest commit with key 70EB7916)
* Cleaned ebuild, 'http://search.cpan.org/CPAN' found in thirdpartymirrorsJustin Lecher2011-06-251-7/+13
| | | | (Portage version: 2.2.0_alpha41/git/Linux x86_64, signed Manifest commit with key 70EB7916)
* sci-biology/gbrowse-2.26: fixed sanbox violation but webap-config bug pops ↵Martin Mokrejs2011-05-111-2/+6
| | | | | | up afterwards (happens later during install) (Portage version: 2.1.9.43/git/Linux i686, unsigned Manifest commit)
* sci-biology/gbrowse: version bump, more DEPS added, tiny webappconfig ↵Martin Mokrejs2011-02-141-3/+3
| | | | | | improvement (Portage version: 2.1.9.28/git/Linux i686, unsigned Manifest commit)
* Version bump and lots of ebuild improvements, it works for me nowMartin Mokrejs2010-11-271-1/+17
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* Remove Safe-World from DEPEND per bug 303589Andrey Kislyuk2010-02-051-1/+1
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* Remove Safe-World from DEPEND per bug 303589Andrey Kislyuk2010-02-051-1/+3
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* Version bump, rewrite and rename to gbrowseAndrey Kislyuk2009-10-111-0/+4