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* Support at least when user passes USE='gnutls -ssl -openssl' but what we ↵Martin Mokrejš2013-09-142-1/+12
| | | | really want is to prefer gnutls over openssl if both are available on the system.
* Add upstream ncbi-tools++-9.0.0-remove-LZO-definition-upstream.patch with ↵Martin Mokrejš2013-09-143-4/+20
| | | | line offset changes.
* Fix URL to point to a public SVN repositoryMartin Mokrejš2013-09-145-2/+35
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* more 12.0.0 cleanup, still not workingMartin Mokrejš2013-09-145-7/+50
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* add ↵Martin Mokrejš2013-09-133-2/+28
| | | | ncbi-tools++-9.0.0-fix-undef-reference-to-GenBankReaders_Register_Id1.patch; get around a bug in the C++ Toolkit's handling of --without-runpath with certain linker versions by running configure with -Wl,-rpath-link,_build/lib in LDFLAGS (assuming _build is an absolute path; otherwise, prepend /home/mmokrejs/proj/sci/sci-biology/ncbi-tools++/) [from Aaron Ucko].
* fix version number in the ebuildMartin Mokrejš2013-09-131-1/+1
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* Remove redundant connect from DLL_LIB lines.Martin Mokrejš2013-09-131-0/+1
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* Remove redundant connect from DLL_LIB lines.Martin Mokrejš2013-09-131-0/+16
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* Remove redundant connect from DLL_LIB lines.Martin Mokrejš2013-09-132-2/+2
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* No, the fix-creaders-linking is needed for 12.0.0 as well.Martin Mokrejš2013-09-133-0/+25
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* Latest release which needs so far only the two Gentoo patches. Would be ↵Martin Mokrejš2013-09-133-0/+2383
| | | | better to drop from their filename to avoid their duplication I think.
* add glew to dependencies inferrred via mesa; fix lib/libxobjread.so: ↵Martin Mokrejš2013-09-133-2/+25
| | | | undefined reference to 'AlignmentFileFree' message by upstream patch
* sci-biology/ncbi-tools++: Drop empty lineJustin Lecher2013-06-122-1/+3
| | | | | Package-Manager: portage-2.2.0_alpha179 RepoMan-Options: --force
* sci-biology/ncbi-tools++: Drop autotools.eclassJustin Lecher2013-06-122-1/+4
| | | | | Package-Manager: portage-2.2.0_alpha179 RepoMan-Options: --force
* sci-biology/ncbi-tools++: Some Prefix loveJustin Lecher2013-04-012-39/+55
| | | | | Package-Manager: portage-2.2.0_alpha170 RepoMan-Options: --force
* sci-biology/ncbi-tools++: Document USEJustin Lecher2013-03-032-0/+33
| | | | | Package-Manager: portage-2.2.0_alpha164 RepoMan-Options: --force
* sci-biology/ncbi-tools++: Clean whitespace errorsJustin Lecher2013-03-033-9/+9
| | | | | Package-Manager: portage-2.2.0_alpha164 RepoMan-Options: --force
* sci-biology/ncbi-tools++: Add metadata.xmlJustin Lecher2013-03-032-0/+16
| | | | | Package-Manager: portage-2.2.0_alpha164 RepoMan-Options: --force
* First working patchJustin Lecher2013-02-211-156/+602
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Next couple of fixesJustin Lecher2013-02-041-39/+356
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* And another step forwardJustin Lecher2013-02-031-4/+4
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Some more patchingJustin Lecher2013-01-311-23/+357
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* More work on as-needed problemsJustin Lecher2013-01-303-119/+1049
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* my versionJustin Lecher2013-01-291-0/+345
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* reverting to --no-as-needed LDFLAGMartin Mokrejs2013-01-081-0/+1
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* reverting to --no-as-needed LDFLAGMartin Mokrejs2013-01-071-4/+2
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* put back in the --as-needed LDFLAG to yield hopefully smaller executables; ↵Martin Mokrejs2013-01-072-22/+17
| | | | recreating the patch so that it applies automatically
* sci-biology/ncbi-tools++-9.0.0: although masked a not passing repoman checks ↵Martin Mokrejs2013-01-076-2/+266
| | | | this ebuild works for me, finally. All patches from upstream.
* sci-biology/ncbi-tools++-9.0.0: a sketch of an updated ebuild, bug #279606, ↵Martin Mokrejs2012-12-286-0/+470
| | | | does not pass repoman checks due to IUSE items
* In main treeAndrey Kislyuk2009-07-265-166/+0
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* Version bumpAndrey Kislyuk2009-07-251-0/+76
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* sci-biology/ncbi-tools++ fixed libdirJustin Lecher (jlec)2009-04-292-4/+6
| | | | | (Portage version: 2.2_rc31/git/Linux i686) (Unsigned Manifest commit)
* New packageAndrey Kislyuk2009-04-284-0/+88