Commit message (Collapse) | Author | Age | Files | Lines | |
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* | Convert all $Header$ to $Id$ tags as it has be done in gentoo.git | Justin Lecher | 2015-08-17 | 2 | -2/+2 |
| | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
* | Fix repoman fatal error (invalid USE description) | Andrew Savchenko | 2015-07-17 | 2 | -0/+6 |
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* | added dep needed at build-time | Horea Christian | 2015-06-23 | 2 | -0/+4 |
| | | | | Package-Manager: portage-2.2.20 | ||||
* | Revert "Gentoo does https by default now" | Justin Lecher | 2015-06-21 | 1 | -1/+1 |
| | | | | This reverts commit 98718494343af4990facdefb0033471686e975a6. | ||||
* | Gentoo does https by default now | Justin Lecher | 2015-06-21 | 1 | -1/+1 |
| | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
* | sci-biology/ncbi-tools++: added upstream patch to compile against ↵ | Martin Mokrejš | 2015-06-11 | 3 | -0/+120 |
| | | | | | | sys-libs/db-6.0.30 Package-Manager: portage-2.2.18 | ||||
* | sci-biology/ncbi-tools++: re-added KEYWORDS | Martin Mokrejš | 2015-04-17 | 2 | -1/+6 |
| | | | | Package-Manager: portage-2.2.18 | ||||
* | sci-biology/ncbi-tools++: fix SLOT operators; correct python deps | Justin Lecher | 2015-02-18 | 2 | -8/+15 |
| | | | | Package-Manager: portage-2.2.17 | ||||
* | ncbi-tools++: fix prefix libdir, muparser/hdf5 use flags | mschubert | 2014-10-09 | 1 | -3/+3 |
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* | major clean, drop old version and unused patches | Christoph Junghans | 2014-09-15 | 15 | -4662/+15 |
| | | | | Package-Manager: portage-2.2.8-r1 | ||||
* | sci-biology/ncbi-tools++-12.0.0: improved comment text | Martin Mokrejš | 2014-06-26 | 1 | -1/+4 |
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* | sci-biology/ncbi-tools++: so require media-libs/mesa[osmesa] for USE=mesa | Martin Mokrejš | 2014-06-26 | 3 | -3/+3 |
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* | sci-biology/ncbi-tools++: reworked patch | Martin Mokrejš | 2014-06-26 | 1 | -6/+6 |
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* | sci-biology/ncbi-tools++: bring back USE=mesa although it is about OSMesa | Martin Mokrejš | 2014-06-26 | 3 | -11/+9 |
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* | sci-biology/ncbi-tools++: fix 'make install if USE=pch | Martin Mokrejš | 2014-06-26 | 2 | -0/+12 |
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* | sci-biology/ncbi-tools++: dropped USE=ftds as it is useless and recommended ↵ | Martin Mokrejš | 2014-06-26 | 3 | -24/+17 |
| | | | | by upstream to be disabled altogether | ||||
* | sci-biology/ncbi-tools++-12.0.0: drop forgotten IUSE=ssl | Martin Mokrejš | 2014-06-26 | 1 | -1/+1 |
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* | sci-biology/ncbi-tools++-12.0.0: added a blocker with sci-biology/sra_sdk | Martin Mokrejš | 2014-06-26 | 1 | -0/+1 |
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* | sci-biology/ncbi-tools++-12.0.0: more places where to drop ':%=%' | Martin Mokrejš | 2014-06-26 | 1 | -1/+1 |
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* | sci-biology/ncbi-tools++-12.0.0: more entries to ↵ | Martin Mokrejš | 2014-06-26 | 1 | -0/+22 |
| | | | | ncbi-tools++-12.0.0-drop-STATIC-from-LIB.patch | ||||
* | sci-biology/ncbi-tools++-12.0.0: added the patch istelf dropping :%=% from ↵ | Martin Mokrejš | 2014-06-26 | 1 | -0/+22 |
| | | | | LIB settings | ||||
* | sci-biology/ncbi-tools++-12.0.0: dropping :%=% from LIB settings | Martin Mokrejš | 2014-06-26 | 1 | -0/+1 |
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* | sci-biology/ncbi-tools++-9.0.0*: dropped altogether openssl-related USE ↵ | Martin Mokrejš | 2014-06-26 | 2 | -13/+5 |
| | | | | flags and configure arguments (per upstream info nothing in the public code uses openssl and the configure test is there for their internal reasonings); dropped gnutls[lzo] requirement which was only need for unpatched 9.0.0 version; however, --with-lzo is still advantageous for http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/group__Compression.htmlhttp://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/group__CompressionStreams.html | ||||
* | sci-biology/ncbi-tools++-12.0.0: dropped altogether openssl-related USE ↵ | Martin Mokrejš | 2014-06-26 | 1 | -3/+1 |
| | | | | flags and configure arguments (per upstream info nothing in the public code uses openssl and the configure test is there for their internal reasonings); dropped gnutls[lzo] requirement which was only need for unpatched 9.0.0 version; however, --with-lzo is still advantageous for http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/group__Compression.htmlhttp://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/group__CompressionStreams.html | ||||
* | sci-biology/ncbi-tools++-12.0.0: cleanup comments and shutdown a false alarm ↵ | Martin Mokrejš | 2014-06-26 | 1 | -2/+1 |
| | | | | message from mv | ||||
* | sci-biology/ncbi-tools++-12.0.0: dropped unneeded patch | Martin Mokrejš | 2014-06-26 | 1 | -1660/+0 |
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* | sci-biology/ncbi-tools++-12.0.0: dropped unneeded patches, added direct ↵ | Martin Mokrejš | 2014-06-26 | 3 | -67/+2 |
| | | | | dependency on glew because the dependency on virtual/opengl does not work | ||||
* | sci-biology/ncbi-tools++-12.0.0: re-added update patch to configure so that ↵ | Martin Mokrejš | 2014-06-25 | 2 | -44264/+67 |
| | | | | we can avoid eautoconf until there is autoconf-2.59 system-wide | ||||
* | sci-biology/ncbi-tools++-12.0.0: install colliding files under a name ↵ | Martin Mokrejš | 2014-06-25 | 1 | -2/+6 |
| | | | | suffixed by a plus sign | ||||
* | sci-biology/ncbi-tools++-12.0.0: first compile-able ebuild, wow, huge thanks ↵ | Martin Mokrejš | 2014-06-25 | 4 | -6/+444 |
| | | | | to Aaron Ucko from NCBI developers on the cpp@ mailing list | ||||
* | more changes to get ncbi-tools++-12.0.0 compiled | Martin Mokrejš | 2014-06-25 | 6 | -1448/+1968 |
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* | dropped the duplicate part from the patch | Martin Mokrejš | 2014-06-23 | 1 | -1660/+0 |
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* | add an extra patch for configure until we find a way to ensure user has ↵ | Martin Mokrejš | 2014-06-23 | 2 | -6/+46083 |
| | | | | autoconf-2.59 or for ncbi-tools++-12.0.0 may have autoconf-2.60 | ||||
* | updating the ChangeLog to note where the ↵ | Martin Mokrejš | 2014-06-23 | 1 | -1/+8 |
| | | | | ncbi-tools++-12.0.0-support-autoconf-2.60.patch comes from | ||||
* | add patches for 12.0.0 to support autoconf-2.60 (so far 2.59 was needed) | Martin Mokrejš | 2014-06-23 | 2 | -3/+1667 |
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* | sci-biology/ncbi-tools++: added a note about a taxonomy database add-on not ↵ | Martin Mokrejš | 2014-06-02 | 3 | -0/+12 |
| | | | | yet installed by Gentoo | ||||
* | Configure works | Justin Lecher | 2014-05-06 | 1 | -8/+8 |
| | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
* | sci-biology/ncbi-tools++: add deps on jpeg-turbo | Martin Mokrejš | 2014-03-25 | 1 | -1/+1 |
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* | Sanitize ebuild header | Justin Lecher | 2014-01-30 | 3 | -6/+6 |
| | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
* | Start to work on it again | Justin Lecher | 2014-01-25 | 3 | -449/+303 |
| | | | | Signed-off-by: Justin Lecher <jlec@gentoo.org> | ||||
* | Support at least when user passes USE='gnutls -ssl -openssl' but what we ↵ | Martin Mokrejš | 2013-09-14 | 2 | -1/+12 |
| | | | | really want is to prefer gnutls over openssl if both are available on the system. | ||||
* | Add upstream ncbi-tools++-9.0.0-remove-LZO-definition-upstream.patch with ↵ | Martin Mokrejš | 2013-09-14 | 3 | -4/+20 |
| | | | | line offset changes. | ||||
* | Fix URL to point to a public SVN repository | Martin Mokrejš | 2013-09-14 | 5 | -2/+35 |
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* | more 12.0.0 cleanup, still not working | Martin Mokrejš | 2013-09-14 | 5 | -7/+50 |
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* | add ↵ | Martin Mokrejš | 2013-09-13 | 3 | -2/+28 |
| | | | | ncbi-tools++-9.0.0-fix-undef-reference-to-GenBankReaders_Register_Id1.patch; get around a bug in the C++ Toolkit's handling of --without-runpath with certain linker versions by running configure with -Wl,-rpath-link,_build/lib in LDFLAGS (assuming _build is an absolute path; otherwise, prepend /home/mmokrejs/proj/sci/sci-biology/ncbi-tools++/) [from Aaron Ucko]. | ||||
* | fix version number in the ebuild | Martin Mokrejš | 2013-09-13 | 1 | -1/+1 |
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* | Remove redundant connect from DLL_LIB lines. | Martin Mokrejš | 2013-09-13 | 1 | -0/+1 |
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* | Remove redundant connect from DLL_LIB lines. | Martin Mokrejš | 2013-09-13 | 1 | -0/+16 |
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* | Remove redundant connect from DLL_LIB lines. | Martin Mokrejš | 2013-09-13 | 2 | -2/+2 |
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* | No, the fix-creaders-linking is needed for 12.0.0 as well. | Martin Mokrejš | 2013-09-13 | 3 | -0/+25 |
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