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* sci-biology/sga: add missing RDEPEND, more commentsMartin Mokrejš2018-01-251-1/+9
| | | | Package-Manager: Portage-2.3.19, Repoman-2.3.6
* sci-biology/sga: convert git:// to https://Martin Mokrejš2018-01-201-1/+1
| | | | Package-Manager: Portage-2.3.19, Repoman-2.3.6
* sci-biology/sga: respect EPREFIXMartin Mokrejš2018-01-101-1/+1
| | | | Package-Manager: Portage-2.3.19, Repoman-2.3.6
* sci-biology/sga: also install needed *.preqc filesMartin Mokrejš2018-01-101-2/+2
| | | | | | | | These files are typically needed for preqc analysis. See https://github.com/jts/sga/wiki/preqc for a typical use case. Package-Manager: Portage-2.3.19, Repoman-2.3.6
* Consistently ident with tabsJustin Lecher2017-11-181-15/+15
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Cleanup remote IDsJustin Lecher2017-04-301-1/+1
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Drop leftover from CVS in HEADERJustin Lecher2017-02-251-1/+0
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-biology/sga: compilation against bamtools does not work, see linkMartin Mokrejš2016-04-101-0/+1
| | | | Package-Manager: portage-2.2.28
* sci-biology/sga: move optional runtime deps to RDEPENDMartin Mokrejš2016-04-101-2/+2
| | | | Package-Manager: portage-2.2.28
* sci-biology/sga: improve package descriptionMartin Mokrejš2016-04-081-2/+2
| | | | Package-Manager: portage-2.2.28
* metadata.xml: Set typeJustin Lecher2016-01-251-2/+2
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* metadata.xml: convert hard -> projJustin Lecher2016-01-251-1/+4
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Drop ChangeLogs in favour of commit messagesJustin Lecher2016-01-071-15/+0
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Use default functionsJustin Lecher2015-09-231-1/+1
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Convert all $Header$ to $Id$ tags as it has be done in gentoo.gitJustin Lecher2015-08-172-2/+2
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Revert "Gentoo does https by default now"Justin Lecher2015-06-211-1/+1
| | | | This reverts commit 98718494343af4990facdefb0033471686e975a6.
* Gentoo does https by default nowJustin Lecher2015-06-211-1/+1
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-biology/sga: Add github to remote-id in metadata.xmlJustin Lecher2015-06-052-4/+9
| | | | Package-Manager: portage-2.2.20
* sci-biology/sga-9999: Switch from git-2 to git-r3; Cleanup; Add missing dieMarius Brehler2015-02-092-6/+7
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* sci-biology/sga: silence repomanJauhien Piatlicki2014-09-051-0/+3
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* sci-biology/sga: new package; forces its own optimization flags but works fineMartin Mokrejš2014-03-243-0/+66