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* sci-chemistry/nmrpipe: Version Bump and cleanupJustin Lecher2015-11-264-51/+42
| | | | | Package-Manager: portage-2.2.25 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/votca-csg: update live ebuildChristoph Junghans2015-11-152-1/+4
| | | | Package-Manager: portage-2.2.20.1
* sci-chemistry/pymol: Always use included apbs pluginJustin Lecher2015-11-122-8/+4
| | | | | | | | | Correctly block files collisions Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=565600 Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* ObsoleteJustin Lecher2015-11-123-76/+0
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/openbabel-python: Import tree changesJustin Lecher2015-11-112-11/+14
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Use dev-python/pillow directly instead of virtual/python-imagingJustin Lecher2015-11-112-2/+2
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Update moved virtualsJustin Lecher2015-11-103-3/+3
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/chimera-bin: Add missing depsJustin Lecher2015-11-031-0/+1
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/xplor-nih: Add missing dep on dev-libs/libeditJustin Lecher2015-10-281-0/+1
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/ambertools: Fix for gcc-5 and format-securityJustin Lecher2015-10-283-8/+136
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/talosn: Version BumpJustin Lecher2015-10-232-0/+69
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/shiftx2: Fix for using glibc internal namings and format-securityJustin Lecher2015-10-233-2/+45
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/redcat: Fix eigen3 header location detectionJustin Lecher2015-10-231-1/+1
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Drop deprecated parallel python eclass supportJustin Lecher2015-10-221-1/+0
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Drop deprecated python eclass functionJustin Lecher2015-10-224-9/+9
| | | | | | | Parallel support has been removed from pyhton eclasses python_parallel_foreach_impl -> python_foreach_impl Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/nmrpipe: Don't install install scriptsJustin Lecher2015-10-121-1/+1
| | | | | Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/chimera-bin: Version BumpJustin Lecher2015-10-103-1/+100
| | | | | | | | Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=562026 Gentoo-Bug: https://bugs.gentoo.org/show_bug.cgi?id=498154 Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/nmrpipe: Version BumpJustin Lecher2015-10-103-22/+17
| | | | | | | properly fix paths in scripts Package-Manager: portage-2.2.23 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/panav: Drop keywordsMarius Brehler2015-10-062-3/+7
| | | | | | | Dependency dev-java/cos is masked and marked for removal. See bug #562370. Package-Manager: portage-2.2.20.1
* Add missing remote-ids to metadataJustin Lecher2015-09-309-10/+37
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/coot: Don't set LD_LIBRARY_PATHJustin Lecher2015-09-251-0/+4
| | | | | Package-Manager: portage-2.2.21 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/votca-csgapps: sync with gx86Christoph Junghans2015-09-232-5/+9
| | | | Package-Manager: portage-2.2.20.1
* sci-chemistry/votca-csg: sync with gx86Christoph Junghans2015-09-232-17/+25
| | | | Package-Manager: portage-2.2.20.1
* Use default functionsJustin Lecher2015-09-233-4/+4
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/concoord: Bump to EAPI=5Justin Lecher2015-09-231-2/+2
| | | | | Package-Manager: portage-2.2.21 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/gamess: Bump to EAPI=5Justin Lecher2015-09-234-615/+5
| | | | | Package-Manager: portage-2.2.21 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/ligplot+: Bump to EAPI=5Justin Lecher2015-09-231-7/+7
| | | | | Package-Manager: portage-2.2.21 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/usf-tools: Bump to EAPI=5Justin Lecher2015-09-231-4/+4
| | | | | Package-Manager: portage-2.2.21 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/simpson: Bump to EAPI=5Justin Lecher2015-09-233-15/+18
| | | | | Package-Manager: portage-2.2.21 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Drop unnecessary die from doinsJustin Lecher2015-09-232-16/+16
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Drop unnecessary die from dodocJustin Lecher2015-09-232-4/+4
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/votca-csg: Add subslot operatorsJustin Lecher2015-09-212-4/+5
| | | | | Package-Manager: portage-2.2.20.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/talosn: Add subslot operatorsJustin Lecher2015-09-211-2/+2
| | | | | Package-Manager: portage-2.2.20.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/redcat: Add subslot operatorsJustin Lecher2015-09-211-2/+2
| | | | | Package-Manager: portage-2.2.20.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/panav: Add subslot operatorsJustin Lecher2015-09-211-2/+2
| | | | | Package-Manager: portage-2.2.20.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/openbabel: Add subslot operatorsJustin Lecher2015-09-211-2/+2
| | | | | Package-Manager: portage-2.2.20.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/mics: Add subslot operatorsJustin Lecher2015-09-211-2/+2
| | | | | Package-Manager: portage-2.2.20.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/burrow-owl: Add subslot operatorsJustin Lecher2015-09-211-2/+2
| | | | | Package-Manager: portage-2.2.20.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Drop obsolete package Sources unavailableJustin Lecher2015-09-218-673/+0
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/jana2000: Fix SRC_URIJustin Lecher2015-09-212-5/+5
| | | | | Package-Manager: portage-2.2.20.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* Drop obsolete Sources unavailableJustin Lecher2015-09-216-171/+0
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/mtz2sca: Fix SRC_URIJustin Lecher2015-09-212-3/+3
| | | | | Package-Manager: portage-2.2.20.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/jligand: Version BumpJustin Lecher2015-09-213-9/+6
| | | | | Package-Manager: portage-2.2.20.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/mtz2hkl: Fix SRC_URIJustin Lecher2015-09-212-3/+3
| | | | | Package-Manager: portage-2.2.20.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/mtz2hkl: Fix depsMarius Brehler2015-09-162-4/+6
| | | | Package-Manager: portage-2.2.20.1
* sci-chemistry/mtz2sca: Fix depsMarius Brehler2015-09-162-4/+6
| | | | Package-Manager: portage-2.2.20.1
* sci-chemistry/coot: Fix PYTHONPATH during testJustin Lecher2015-09-151-1/+1
| | | | | Package-Manager: portage-2.2.20.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/coot: Fix for latest HEADJustin Lecher2015-09-156-1087/+127
| | | | | Package-Manager: portage-2.2.20.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/phenix-bin: Fix path correctionJustin Lecher2015-09-091-2/+2
| | | | | Package-Manager: portage-2.2.20.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-chemistry/pymol-plugins-psico: Don't harddepend on packages which ↵Justin Lecher2015-09-091-2/+5
| | | | | | | require ancient numpy Package-Manager: portage-2.2.20.1 Signed-off-by: Justin Lecher <jlec@gentoo.org>