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* fix installationMatthias Maier2014-12-242-2/+3
| | | | Package-Manager: portage-2.2.15
* version bump; ebuild maintenance; fix SRC_URIMatthias Maier2014-12-246-61/+85
| | | | Package-Manager: portage-2.2.15
* fixed deps (bug #532752)Christoph Junghans2014-12-162-1/+4
| | | | Package-Manager: portage-2.2.14
* Version bumps of sci-libs/libxc to versions 2.1.1 and 2.2.1, cleanup.Honza Macháček2014-12-109-297/+11
| | | | Package-Manager: portage-2.2.14
* Bumped sci-libs/wannier90 to version 2.0. Preserved 1.2 version until ↵Honza Macháček2014-12-104-1/+76
| | | | | | compatibility of 2.0 with sci-physics/abinit is verified, stepped up to 1.2-r3 purging forgotten LIBDIR/finclude. Package-Manager: portage-2.2.14
* version bumpMatthias Maier2014-12-064-0/+270
| | | | Package-Manager: portage-2.2.15
* sci-libs/mkl: Version BUmpJustin Lecher2014-12-023-0/+149
| | | | Package-Manager: portage-2.2.14
* fixed latex depChristoph Junghans2014-11-142-7/+5
| | | | Package-Manager: portage-2.2.8-r2
* deps on boost:=Christoph Junghans2014-11-132-1/+4
| | | | Package-Manager: portage-2.2.8-r2
* sci-libs/dcmtk: Move large patch into patch dirJustin Lecher2014-11-134-7/+15
| | | | Package-Manager: portage-2.2.14
* Move large patch into patchdirJustin Lecher2014-11-131-1804/+0
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-libs/bigdft-abi: Move large patch; drop unnecessary quotesJustin Lecher2014-11-133-15/+22
| | | | Package-Manager: portage-2.2.14
* Move big patchesJustin Lecher2014-11-121-5317/+0
| | | | Signed-off-by: Justin Lecher <jlec@gentoo.org>
* sci-libs/ni-visa: Bump to EAPI=5Justin Lecher2014-11-123-17/+13
| | | | Package-Manager: portage-2.2.14
* sci-libs/driftwood: Bump to EAPI=5Justin Lecher2014-11-123-2/+8
| | | | Package-Manager: portage-2.2.14
* added multilib support (bug #528622)Christoph Junghans2014-11-102-0/+65
| | | | Package-Manager: portage-2.2.8-r2
* version bumpMatthias Maier2014-10-224-1/+210
| | | | Package-Manager: portage-2.2.8-r2
* Thanks to kiwifb for reporting ↵gienah2014-10-202-1/+13
| | | | https://github.com/gentoo-science/sci/issues/280 - Fix openblas: discrepancy between installed libraries and .pc file.
* The fix for Bug 524612 failed in src_install building openblas from git. The ↵gienah2014-10-192-6/+16
| | | | fix is to move applying the patch to src_compile after building the library, then remove config.h and config_last.h; make config.h - ignoring the spurious warning; then cp config.h to config_last.h.
* Fix Bug 524612 - [science overlay] sci-libs/openblas-0.2.11 - Assembler ↵gienah2014-10-194-2/+22
| | | | messages: ../kernel/x86_64/gemm_kernel_8x4_barcelona.S:451: Error: missing ')', thanks to Juergen Rose, Jean-Francis Roy and Steven Trogdon for reporting. The problem was that applying the -0.2.11-openblas_config_header_same_between_ABIs.patch patch in src_prepare() causes build failures on assembler code as the assembler does not understand sizeof(float). So delay applying the patch until src_install(). Bump openblas to 0.2.12.
* Merge int64-eclass branch with master. lapack-reference-9999 builds and ↵gienah2014-10-1821-90/+462
|\ | | | | | | passes tests with USE=int64 xblas.
| * Merge branch 'master' of ssh://github.com/gentoo-science/sciChristoph Junghans2014-10-1616-90/+308
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| | * fix p4est dependency; drop oldMatthias Maier2014-10-145-4/+283
| | | | | | | | | | | | Package-Manager: portage-2.2.8-r2
| | * sci-libs/p4est: Fix build dependenciesMatthias Maier2014-10-142-1/+5
| | | | | | | | | | | | Package-Manager: portage-2.2.8-r2
| | * sci-libs/p4est: Version bump; update metadata.xmlMatthias Maier2014-10-145-3/+11
| | | | | | | | | | | | Package-Manager: portage-2.2.8-r2
| | * sci-libs/libsc: Drop old; version bump; update metadata.xmlMatthias Maier2014-10-146-82/+9
| | | | | | | | | | | | Package-Manager: portage-2.2.8-r2
| * | version bumpChristoph Junghans2014-10-165-0/+154
| |/ | | | | | | Package-Manager: portage-2.2.8-r2
| * Fix support for xblas, it is only available for 32bit integers.François Bissey2014-10-131-8/+8
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* | Thanks to kiwifb for reviewing and the fix: change ROOT to EROOT to support ↵gienah2014-10-142-1/+5
| | | | | | | | Gentoo prefix.
* | Thanks to tamiko for testing - the earlier fix for xblas, ↵gienah2014-10-142-3/+9
| | | | | | | | -DXBLAS_LIBRARY:FILEPATH="${ROOT}usr/$(get_libdir)/lib${xblas_libname}.so", breaks the build with USE=-xblas, so only do this when use xblas.
* | Thanks to tamiko for testing and the fix to the problem: sci-libs/xblas is ↵gienah2014-10-142-1/+7
| | | | | | | | missing sys-devel/m4 as build time dependency (at least the configure script checks for it and barfs).
* | Specify the xblas library location to cmake - ↵gienah2014-10-132-0/+8
| | | | | | | | sci-libs/lapack-reference-9999::science USE="int64 static-libs {test*} xblas*" ABI_X86="32 (64) (-x32)" builds and passes tests with eselect blas show = reference
* | multilib int64 multibuild xblas. The int64 build may not work though, not ↵gienah2014-10-133-1/+132
| | | | | | | | tested.
* | multilib int64 multibuild cblas-reference. int64 fails tests with blas-referencegienah2014-10-133-0/+167
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* | multilib int64 multibuild blas-referencegienah2014-10-135-28/+156
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* | Refactor to lapack-reference use the fortran-int64.eclass. Add the virtual ↵gienah2014-10-132-125/+50
| | | | | | | | to PDEPEND. Call fortran-int64_ensure_blas to check the blas pkg-config file is available, and the blas-int64 pkg-config file if the int64 USE flag is specified. Remove the sed -e /export/s:lapack::g line for CMakeLists.txt, as I do not wish to change this line: "export(TARGETS ${ALL_TARGETS} FILE lapack-targets.cmake)". Change the addition of the xblas library to the Requires of the pkg-config file to allow for using an int64 build of xblas, by renaming BLAS_PROFNAME to BLAS_REQUIRES then including xblas in the -DBLAS_REQUIRES in src_configure. Try to fix https://github.com/gentoo-science/sci/issues/275 and Bug 524830 - sci-libs/arpack - configure: ld: cannot find -llapack_rs6k by calculating the blas pkg-config file to add to the Requires - needs testing.
* | Refactor openblas to use the fortran-int64.eclass. Move the virtuals from ↵gienah2014-10-132-118/+32
|/ | | | RDEPEND to PDEPEND to avoid circular dependencies. Specify the pkg-config module name in openblas
* The circular dependency of sci-libs/lapack-reference-3.5.0 on virtual/lapack ↵Honza Macháček2014-10-082-1/+4
| | | | | | removed. Package-Manager: portage-2.2.14_rc1
* sci-libs/lapack-reference: respect flagsJustin Lecher2014-10-063-8/+12
| | | | Package-Manager: portage-2.2.14_rc1
* Remove the setting of the FC and F77 environment variables, instead sed the ↵gienah2014-09-272-20/+41
| | | | COMMON_OPT in Makefile.rule to include the $(get_abi_CFLAGS). Add get_openblas_abi_cflags and get_openblas_abi_fflags, call them to create the pkg-config ${profname}.pc files. Call get_openblas_abi_cflags to obtain the defines, then remove the OPENBLAS_ at the start, and sed these into COMMON_OPT in Makefile.rule, as USE64BITINT was removed by the patch openblas-0.2.11-openblas_config_header_same_between_ABIs.patch that is required to ensure the openblas_config.h header file is the same between ABIs.
* Fix rebase lapack-multibuild to master conflict 11 on sci-libs/lapack-referencegienah2014-09-272-4/+7
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* openblas-0.2.11 requires the cpuid_x86 patchgienah2014-09-271-27/+0
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* Fix rebase lapack-multibuild to master conflict 6 on sci-libs/openblasgienah2014-09-271-0/+27
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* Fix rebase lapack-multibuild to master conflict 5 on sci-libs/openblasgienah2014-09-271-3/+0
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* Fix rebase lapack-multibuild to master conflict 3 on sci-libs/openblasgienah2014-09-271-0/+3
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* openblas-0.2.11 requires the cpuid_x86 patchgienah2014-09-272-0/+3
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* Fix rebase lapack-multibuild to master conflict 2 on sci-libs/lapack-referencegienah2014-09-272-5/+29
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* Add >=virtual/blas-2.1-r2[int64?] and >=virtual/cblas-2.0-r1[int64?] to ↵gienah2014-09-275-26/+121
| | | | RDEPEND. Use separate eselect modules for blas, blas-int64, cblas and cblas-int64. Bump to 0.2.11 using multi build. Remove openblas-9999-cpuid_x86.patch as a similar change has been applied by upstream. Tweak the openblas_config.h file to be the same between ABIs.
* multilib as well for lapack-referencegienah2014-09-271-19/+45
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* openblas: Strip the _int64 suffix from the BUILD_VARIANT to calculate the ABIgienah2014-09-271-11/+13
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