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# Copyright 1999-2012 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: $
EAPI=4
inherit toolchain-funcs versionator java-pkg-2
# MY_PV=$(replace_all_version_separators '-')
MY_PV="oboedit_2_1_1-b6"
MY_VER="2.1.1-b6"
MY_PV=$(replace_all_version_separators '-')
DESCRIPTION="Java-based editor optimized for the OBO biological ontology file format"
HOMEPAGE="http://www.oboedit.org/"
SRC_URI="http://downloads.sourceforge.net/project/geneontology/OBO-Edit%202%20%5BLatest%20versions%5D/"${MY_VER}"/"${MY_PV}"_unix_install4j.sh -> "${PN}"_unix_install4j-"${PV}".sh
http://sourceforge.net/projects/geneontology/files/OBO-Edit%202%20%5BLatest%20versions%5D/"${MY_PV}"/ReleaseNotes-"${MY_VER}".txt -> "${PN}"_ReleaseNotes-"${PV}".txt"
LICENSE="OBO-Edit" # Artistic-like
SLOT="0"
KEYWORDS="~amd64 ~x86"
IUSE=""
DEPEND="app-arch/rpm2targz"
RDEPEND="virtual/jre"
S="${WORKDIR}"
pkg_setup() {
einfo "Fixing java access violations ..."
# learned from bug #387227
# opened a bug #402507 to get this .systemPrefs directory pre-created for everybody
addpredict /opt/icedtea-bin-7.2.0/jre/.systemPrefs
addpredict /usr/local/bin/OBO-Edit
}
src_prepare(){
mkdir -p "${D}"/opt/OBO-Edit2/.install4j || die "Cannot pre-create "${D}"/opt/OBO-Edit2/.install4j/"
mkdir -p "${D}"/usr/bin
# /var/tmp/portage/sci-biology/OBO-Edit-2.1.1.6/image//opt/OBO-Edit2/.install4j/response.varfile
sed -e "s#\"\${D}\"#"${D}"#g" "${FILESDIR}"/response.varfile | \
sed -e "s#\"\${TMPDIR}\"#"${TMPDIR}"#g" | \
sed -e "s@sys.symlinkDir=/usr/local/bin@#sys.symlinkDir=/usr/local/bin@" > \
"${D}"/opt/OBO-Edit2/.install4j/response.varfile || die "sed failed"
cp -r "${D}"/opt/OBO-Edit2/.install4j "${TMPDIR}"
# for user root install4j writes into /opt/icedtea-bin-7.2.0/jre/.systemPrefs or whatever it
# found via JAVA_HOME or similar variables
# for other users it writes into $HOME/.java/.userPrefs/
# trick setting -Djava.util.prefs.systemRoot="${TMPDIR}" does not work
sed -e "s@/bin/java\" -Dinstall4j.jvmDir=\"\$app_java_home\"@/bin/java\" -Duser.home="${TMPDIR}" -Dinstall4j.jvmDir="${TMPDIR}" -Dsys.symlinkDir="${D}"usr/bin -Djava.util.prefs.systemRoot="${TMPDIR}"@" -i "${DISTDIR}"/"${PN}"_unix_install4j-"${PV}".sh || die "failed to set userHome and jvmDir where JAVA .systemPrefs can be found"
chmod u+rx "${DISTDIR}"/"${PN}"_unix_install4j-"${PV}".sh
grep Duser "${DISTDIR}"/"${PN}"_unix_install4j-"${PV}".sh
}
src_install(){
cat "${TMPDIR}"/.install4j/response.varfile
chmod a-w "${TMPDIR}"/.install4j/response.varfile
INSTALL4J_KEEP_TEMP="yes" HOME="${TMPDIR}" "${DISTDIR}"/"${PN}"_unix_install4j-"${PV}".sh -q --varfile="${TMPDIR}"/.install4j/response.varfile --destination="${D}"/opt/OBO-Edit2 -dir "${D}"/opt/OBO-Edit2 || die "Failed to run the self-extracting "${DISTDIR}"/"${PN}"_unix_install4j-"${PV}".sh file"
find . -name firstrun -delete
find . -name .svn -exec rm -rf '{}' \;
dodoc "${DISTDIR}"/"${PN}"_ReleaseNotes-"${PV}".txt
}
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