blob: 9df8930e5571a29e15c73164f88786a913f9da09 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
|
# Copyright 1999-2021 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
PYTHON_COMPAT=( python3_{7,8,9} )
inherit distutils-r1
DESCRIPTION="Utilities for RNA-seq data quality control"
HOMEPAGE="https://sourceforge.net/projects/rseqc/"
SRC_URI="https://sourceforge.net/projects/rseqc/files/RSeQC-${PV}.tar.gz
https://sourceforge.net/projects/rseqc/files/other/fetchChromSizes"
LICENSE="GPL-3"
SLOT="0"
KEYWORDS="~amd64"
BDEPEND="
dev-python/cython[${PYTHON_USEDEP}]
dev-python/nose[${PYTHON_USEDEP}]
"
RDEPEND="
>=sci-biology/pysam-0.7.5[${PYTHON_USEDEP}]
sci-biology/bx-python[${PYTHON_USEDEP}]
dev-python/numpy[${PYTHON_USEDEP}]
dev-python/pyBigWig[${PYTHON_USEDEP}]
"
python_prepare_all() {
distutils-r1_python_prepare_all
# avoid file collision with bx-python
rm lib/psyco_full.py || die
}
|
GitWeb
