blob: e57fe331300efc40b14bcc42c625b3dbc7c728df (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
|
# Copyright 1999-2020 Gentoo Authors
# Distributed under the terms of the GNU General Public License v2
EAPI=7
PYTHON_COMPAT=( python2_7 python3_5 )
inherit distutils-r1
[[ "$PV" == "9999" ]] && inherit git-r3
DESCRIPTION="Extract reads from BAM files, normalize, draw figures, convert BAM to bigWig"
HOMEPAGE="https://github.com/fidelram/deepTools"
if [[ "$PV" == "9999" ]]; then
EGIT_REPO_URI="https://github.com/fidelram/deepTools"
else
SRC_URI="https://github.com/fidelram/deepTools/archive/2.5.0.tar.gz -> ${P}.tar.gz"
fi
LICENSE="GPL-3"
SLOT="0"
KEYWORDS="~amd64"
DEPEND=">=dev-python/numpy-1.8.0
>=dev-python/scipy-0.17.0
>=dev-python/py2bit-0.1.0
>=dev-python/pyBigWig-0.2.1
>=sci-biology/pysam-0.8
>=dev-python/matplotlib-1.4.0"
RDEPEND="${DEPEND}"
|
GitWeb
