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# Copyright 1999-2008 Gentoo Foundation
# Distributed under the terms of the GNU General Public License v2
# $Header: $
DESCRIPTION="FASTA is a DNA and Protein sequence alignment software package"
HOMEPAGE="http://fasta.bioch.virginia.edu/fasta_www2/fasta_down.shtml"
SRC_URI="http://faculty.virginia.edu/wrpearson/${PN}/${PN}3/${P}.tar.gz"
LICENSE="fasta"
SLOT="0"
KEYWORDS="~x86 ~amd64"
IUSE="debug icc sse2"
DEPEND="icc? ( dev-lang/icc )"
RDEPEND=""
CC_ALT=
CFLAGS_ALT=
ALT=
if use debug ; then
CFLAGS_ALT=-g -DDEBUG
fi
if use icc ; then
CC_ALT=icc
ALT="${ALT}_icc"
else
CC_ALT=gcc
fi
if use sse2 ; then
ALT="${ALT}_sse2"
CFLAGS_ALT="${CFLAGS_ALT} -msse2"
if ! use icc ; then
CFLAGS_ALT="${CFLAGS_ALT} -ffast-math"
fi
fi
src_compile() {
einfo "Using $CC_ALT compiler"
make -f Makefile.linux${ALT} CC="${CC_ALT} ${CFLAGS}" all
}
src_install() {
dodir /usr/bin
make -f Makefile.linux${ALT} CC="${CC_ALT} ${CFLAGS}" XDIR="${D}/usr/bin" install
doman fasta3.1 fasta35.1 fastf3.1 fasts3.1 map_db.1 prss3.1 ps_lav.1 pvcomp.1
dodoc COPYRIGHT FASTA_LIST README README.versions fasta20.doc
dohtml changes_v34.html changes_v35.html search.html
}
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